RNA–Protein interactions for RNA: ENST00000525348.1

CD44-217, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 568 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-217ENST00000525348 ZNF793Q6ZN11 406 aa4.6□□□□□ -1.67
CD44-217ENST00000525348 KRT27Q7Z3Y8 459 aa4.6□□□□□ -1.67
CD44-217ENST00000525348 SKAP1Q86WV1 359 aa4.6□□□□□ -1.67
CD44-217ENST00000525348 OR4N4Q8N0Y3 316 aa4.6□□□□□ -1.67
CD44-217ENST00000525348 ZFYVE19Q96K21 471 aa4.6□□□□□ -1.67
CD44-217ENST00000525348 TTLL2Q9BWV7 592 aa4.6□□□□□ -1.67
CD44-217ENST00000525348 HELLSQ9NRZ9 838 aa4.6□□□□□ -1.67
CD44-217ENST00000525348 ZBTB40Q9NUA8 1239 aa4.6□□□□□ -1.67
CD44-217ENST00000525348 FBXO28Q9NVF7 368 aa4.6□□□□□ -1.67
CD44-217ENST00000525348 TMEM45AQ9NWC5 275 aa4.6□□□□□ -1.67
CD44-217ENST00000525348 SLC52A1Q9NWF4 448 aa4.6□□□□□ -1.67
CD44-217ENST00000525348 A0A0G2JK05 382 aa4.59□□□□□ -1.67
CD44-217ENST00000525348 AQP12BA6NM10 295 aa4.59□□□□□ -1.67
CD44-217ENST00000525348 GLP2RO95838 553 aa4.59□□□□□ -1.67
CD44-217ENST00000525348 SLC3A2P08195 630 aaKnown RBP4.59□□□□□ -1.67
CD44-217ENST00000525348 NPPBP16860 134 aa4.59□□□□□ -1.67
CD44-217ENST00000525348 IL6STP40189 918 aaPredicted RBP4.59□□□□□ -1.67
CD44-217ENST00000525348 FAM3BP58499 235 aaPredicted RBP4.59□□□□□ -1.67
CD44-217ENST00000525348 CSHL1Q14406 222 aa4.59□□□□□ -1.67
CD44-217ENST00000525348 PGM5Q15124 567 aa4.59□□□□□ -1.67
CD44-217ENST00000525348 SPATA31A5Q5VU36 1347 aa4.59□□□□□ -1.67
CD44-217ENST00000525348 ZNF474Q6S9Z5 364 aaPredicted RBP4.59□□□□□ -1.67
CD44-217ENST00000525348 FAM57BQ71RH2 274 aa4.59□□□□□ -1.67
CD44-217ENST00000525348 SPATA31A7Q8IWB4 1347 aa4.59□□□□□ -1.67
CD44-217ENST00000525348 FAM186BQ8IYM0 893 aa4.59□□□□□ -1.67
CD44-217ENST00000525348 ARL14EPQ8N8R7 260 aaPredicted RBP4.59□□□□□ -1.67
CD44-217ENST00000525348 EXD3Q8N9H8 876 aa4.59□□□□□ -1.67
CD44-217ENST00000525348 SVIPQ8NHG7 77 aa4.59□□□□□ -1.67
CD44-217ENST00000525348 BCAS4Q8TDM0 211 aa4.59□□□□□ -1.67
CD44-217ENST00000525348 MUL1Q969V5 352 aa4.59□□□□□ -1.67
CD44-217ENST00000525348 MSI2Q96DH6 328 aaKnown RBP4.59□□□□□ -1.67
CD44-217ENST00000525348 NAF1Q96HR8 494 aaKnown RBP4.59□□□□□ -1.67
CD44-217ENST00000525348 TNIP3Q96KP6 325 aa4.59□□□□□ -1.67
CD44-217ENST00000525348 UBE2J1Q9Y385 318 aaPredicted RBP4.59□□□□□ -1.67
CD44-217ENST00000525348 TTC3P53804 2025 aa4.58□□□□□ -1.68
CD44-217ENST00000525348 TRBV5-3A0A0A0MS03 114 aa4.58□□□□□ -1.68
CD44-217ENST00000525348 A0A1W2PPC1 479 aa4.58□□□□□ -1.68
CD44-217ENST00000525348 ZNF814B7Z6K7 855 aa4.58□□□□□ -1.68
CD44-217ENST00000525348 ASNA1O43681 348 aa4.58□□□□□ -1.68
CD44-217ENST00000525348 PPP6R2O75170 966 aa4.58□□□□□ -1.68
CD44-217ENST00000525348 RPP40O75818 363 aaKnown RBP4.58□□□□□ -1.68
CD44-217ENST00000525348 WNT1P04628 370 aa4.58□□□□□ -1.68
CD44-217ENST00000525348 CD63P08962 238 aa4.58□□□□□ -1.68
CD44-217ENST00000525348 TMEM191BP0C7N4 346 aa4.58□□□□□ -1.68
CD44-217ENST00000525348 TFEBP19484 476 aa4.58□□□□□ -1.68
CD44-217ENST00000525348 PPM1AP35813 382 aa4.58□□□□□ -1.68
CD44-217ENST00000525348 PLCD1P51178 756 aa4.58□□□□□ -1.68
CD44-217ENST00000525348 B4GALNT1Q00973 533 aa4.58□□□□□ -1.68
CD44-217ENST00000525348 AAK1Q2M2I8 961 aa4.58□□□□□ -1.68
CD44-217ENST00000525348 CCDC181Q5TID7 509 aa4.58□□□□□ -1.68
CD44-217ENST00000525348 DHRS13Q6UX07 377 aa4.58□□□□□ -1.68
CD44-217ENST00000525348 ARFGAP1Q8N6T3 406 aa4.58□□□□□ -1.68
CD44-217ENST00000525348 OR1N1Q8NGS0 311 aa4.58□□□□□ -1.68
CD44-217ENST00000525348 STYXQ8WUJ0 223 aa4.58□□□□□ -1.68
CD44-217ENST00000525348 ELAC2Q9BQ52 826 aaKnown RBP4.58□□□□□ -1.68
CD44-217ENST00000525348 PIMREGQ9BSJ6 248 aa4.58□□□□□ -1.68
CD44-217ENST00000525348 ANP32EQ9BTT0 268 aa4.58□□□□□ -1.68
CD44-217ENST00000525348 TRMOQ9BU70 441 aa4.58□□□□□ -1.68
CD44-217ENST00000525348 EMSYQ7Z589 1322 aa4.57□□□□□ -1.68
CD44-217ENST00000525348 NKX2-8O15522 239 aa4.57□□□□□ -1.68
CD44-217ENST00000525348 DNPH1O43598 174 aa4.57□□□□□ -1.68
CD44-217ENST00000525348 TLX3O43711 291 aaPredicted RBP4.57□□□□□ -1.68
CD44-217ENST00000525348 UGDHO60701 494 aa4.57□□□□□ -1.68
CD44-217ENST00000525348 ENO1P06733 434 aaKnown RBP4.57□□□□□ -1.68
CD44-217ENST00000525348 PSG1P11464 419 aa4.57□□□□□ -1.68
CD44-217ENST00000525348 ME1P48163 572 aa4.57□□□□□ -1.68
CD44-217ENST00000525348 CCT4P50991 539 aaKnown RBP4.57□□□□□ -1.68
CD44-217ENST00000525348 SLC12A2P55011 1212 aa4.57□□□□□ -1.68
CD44-217ENST00000525348 SLC37A1P57057 533 aa4.57□□□□□ -1.68
CD44-217ENST00000525348 FOXL2P58012 376 aa4.57□□□□□ -1.68
CD44-217ENST00000525348 MIDNQ504T8 468 aa4.57□□□□□ -1.68
CD44-217ENST00000525348 TTLL5Q6EMB2 1281 aa4.57□□□□□ -1.68
CD44-217ENST00000525348 TRABD2AQ86V40 505 aa4.57□□□□□ -1.68
CD44-217ENST00000525348 UEVLDQ8IX04 471 aa4.57□□□□□ -1.68
CD44-217ENST00000525348 SYTL1Q8IYJ3 562 aa4.57□□□□□ -1.68
CD44-217ENST00000525348 ZFPM2Q8WW38 1151 aa4.57□□□□□ -1.68
CD44-217ENST00000525348 TMEM41AQ96HV5 264 aa4.57□□□□□ -1.68
CD44-217ENST00000525348 ZNF347Q96SE7 839 aa4.57□□□□□ -1.68
CD44-217ENST00000525348 PRPF18Q99633 342 aaKnown RBP4.57□□□□□ -1.68
CD44-217ENST00000525348 MECRQ9BV79 373 aa4.57□□□□□ -1.68
CD44-217ENST00000525348 NLRC4Q9NPP4 1024 aa4.57□□□□□ -1.68
CD44-217ENST00000525348 MSRB1Q9NZV6 116 aa4.57□□□□□ -1.68
CD44-217ENST00000525348 HS3ST3B1Q9Y662 390 aa4.57□□□□□ -1.68
CD44-217ENST00000525348 KIF28PB7ZC32 967 aa4.56□□□□□ -1.68
CD44-217ENST00000525348 CNTN5O94779 1100 aa4.56□□□□□ -1.68
CD44-217ENST00000525348 TNFRSF6BO95407 300 aa4.56□□□□□ -1.68
CD44-217ENST00000525348 TOMM40O96008 361 aa4.56□□□□□ -1.68
CD44-217ENST00000525348 AKR1A1P14550 325 aa4.56□□□□□ -1.68
CD44-217ENST00000525348 TAS2R50P59544 299 aa4.56□□□□□ -1.68
CD44-217ENST00000525348 RPL15P61313 204 aaKnown RBP4.56□□□□□ -1.68
CD44-217ENST00000525348 SHC2P98077 582 aa4.56□□□□□ -1.68
CD44-217ENST00000525348 CBFBQ13951 182 aa4.56□□□□□ -1.68
CD44-217ENST00000525348 TWIST1Q15672 202 aa4.56□□□□□ -1.68
CD44-217ENST00000525348 ODF3L2Q3SX64 289 aa4.56□□□□□ -1.68
CD44-217ENST00000525348 ANXA2RQ3ZCQ2 193 aa4.56□□□□□ -1.68
CD44-217ENST00000525348 SYCP2LQ5T4T6 812 aa4.56□□□□□ -1.68
CD44-217ENST00000525348 ASPHD1Q5U4P2 390 aa4.56□□□□□ -1.68
CD44-217ENST00000525348 ANKRD40Q6AI12 368 aa4.56□□□□□ -1.68
CD44-217ENST00000525348 TTC30AQ86WT1 665 aa4.56□□□□□ -1.68
CD44-217ENST00000525348 ADGRF4Q8IZF3 695 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms