RNA–Protein interactions for RNA: ENST00000525132.1

CSDE1-209, Transcript of cold shock domain containing E1, humanhuman

TSL 5

Gene CSDE1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-209ENST00000525132 SKAP1Q86WV1 359 aa3.56□□□□□ -1.84
CSDE1-209ENST00000525132 MRPL43Q8N983 215 aaKnown RBP3.56□□□□□ -1.84
CSDE1-209ENST00000525132 ANKRD42Q8N9B4 389 aa3.56□□□□□ -1.84
CSDE1-209ENST00000525132 FAM133AQ8N9E0 248 aa3.56□□□□□ -1.84
CSDE1-209ENST00000525132 VPS37AQ8NEZ2 397 aa3.56□□□□□ -1.84
CSDE1-209ENST00000525132 PARD3BQ8TEW8 1205 aa3.56□□□□□ -1.84
CSDE1-209ENST00000525132 STAMQ92783 540 aa3.56□□□□□ -1.84
CSDE1-209ENST00000525132 ZNF578Q96N58 590 aaPredicted RBP3.56□□□□□ -1.84
CSDE1-209ENST00000525132 AIFM3Q96NN9 605 aa3.56□□□□□ -1.84
CSDE1-209ENST00000525132 GBP4Q96PP9 640 aa3.56□□□□□ -1.84
CSDE1-209ENST00000525132 SENP7Q9BQF6 1050 aa3.56□□□□□ -1.84
CSDE1-209ENST00000525132 TACO1Q9BSH4 297 aaKnown RBP3.56□□□□□ -1.84
CSDE1-209ENST00000525132 KRTAP3-1Q9BYR8 98 aa3.56□□□□□ -1.84
CSDE1-209ENST00000525132 ZDHHC5Q9C0B5 715 aa3.56□□□□□ -1.84
CSDE1-209ENST00000525132 PITHD1Q9GZP4 211 aaPredicted RBP3.56□□□□□ -1.84
CSDE1-209ENST00000525132 OR10A5Q9H207 317 aa3.56□□□□□ -1.84
CSDE1-209ENST00000525132 PLCB1Q9NQ66 1216 aa3.56□□□□□ -1.84
CSDE1-209ENST00000525132 ACSS2Q9NR19 701 aa3.56□□□□□ -1.84
CSDE1-209ENST00000525132 C14orf119Q9NWQ9 140 aa3.56□□□□□ -1.84
CSDE1-209ENST00000525132 SERGEFQ9UGK8 458 aa3.56□□□□□ -1.84
CSDE1-209ENST00000525132 FBXO9Q9UK97 447 aaPredicted RBP3.56□□□□□ -1.84
CSDE1-209ENST00000525132 GREB1LQ9C091 1923 aaPredicted RBP3.56□□□□□ -1.84
CSDE1-209ENST00000525132 GON4LQ3T8J9 2241 aa3.55□□□□□ -1.84
CSDE1-209ENST00000525132 KLHL33A6NCF5 533 aa3.55□□□□□ -1.84
CSDE1-209ENST00000525132 MROH6A6NGR9 719 aa3.55□□□□□ -1.84
CSDE1-209ENST00000525132 MATN2O00339 956 aa3.55□□□□□ -1.84
CSDE1-209ENST00000525132 PMM2O15305 246 aa3.55□□□□□ -1.84
CSDE1-209ENST00000525132 PHF1O43189 567 aaPredicted RBP3.55□□□□□ -1.84
CSDE1-209ENST00000525132 XPOTO43592 962 aaKnown RBP3.55□□□□□ -1.84
CSDE1-209ENST00000525132 PCDHGA12O60330 932 aa3.55□□□□□ -1.84
CSDE1-209ENST00000525132 CNOT4O95628 575 aaKnown RBP3.55□□□□□ -1.84
CSDE1-209ENST00000525132 CYP17A1P05093 508 aa3.55□□□□□ -1.84
CSDE1-209ENST00000525132 HALP42357 657 aa3.55□□□□□ -1.84
CSDE1-209ENST00000525132 TRAPPC10P48553 1259 aa3.55□□□□□ -1.84
CSDE1-209ENST00000525132 KIF11P52732 1056 aa3.55□□□□□ -1.84
CSDE1-209ENST00000525132 SCAND1P57086 179 aa3.55□□□□□ -1.84
CSDE1-209ENST00000525132 SESN3P58005 492 aa3.55□□□□□ -1.84
CSDE1-209ENST00000525132 NFYCQ13952 458 aa3.55□□□□□ -1.84
CSDE1-209ENST00000525132 GALEQ14376 348 aa3.55□□□□□ -1.84
CSDE1-209ENST00000525132 ZSCAN23Q3MJ62 389 aa3.55□□□□□ -1.84
CSDE1-209ENST00000525132 C14orf28Q4W4Y0 310 aa3.55□□□□□ -1.84
CSDE1-209ENST00000525132 SULT6B1Q6IMI4 303 aa3.55□□□□□ -1.84
CSDE1-209ENST00000525132 MTHFD1LQ6UB35 978 aa3.55□□□□□ -1.84
CSDE1-209ENST00000525132 MAMDC4Q6UXC1 1216 aa3.55□□□□□ -1.84
CSDE1-209ENST00000525132 COPS6Q7L5N1 327 aa3.55□□□□□ -1.84
CSDE1-209ENST00000525132 ZNF354CQ86Y25 554 aa3.55□□□□□ -1.84
CSDE1-209ENST00000525132 LYSMD2Q8IV50 215 aa3.55□□□□□ -1.84
CSDE1-209ENST00000525132 CMTR2Q8IYT2 770 aaKnown RBP3.55□□□□□ -1.84
CSDE1-209ENST00000525132 CLRN3Q8NCR9 226 aa3.55□□□□□ -1.84
CSDE1-209ENST00000525132 IL17REQ8NFR9 667 aa3.55□□□□□ -1.84
CSDE1-209ENST00000525132 SLC35G2Q8TBE7 412 aa3.55□□□□□ -1.84
CSDE1-209ENST00000525132 ADAMTS18Q8TE60 1221 aa3.55□□□□□ -1.84
CSDE1-209ENST00000525132 CFHR4Q92496 578 aa3.55□□□□□ -1.84
CSDE1-209ENST00000525132 SEPT8Q92599 483 aa3.55□□□□□ -1.84
CSDE1-209ENST00000525132 APBB2Q92870 758 aa3.55□□□□□ -1.84
CSDE1-209ENST00000525132 SLC5A5Q92911 643 aa3.55□□□□□ -1.84
CSDE1-209ENST00000525132 TNIP3Q96KP6 325 aa3.55□□□□□ -1.84
CSDE1-209ENST00000525132 HERPUD2Q9BSE4 406 aa3.55□□□□□ -1.84
CSDE1-209ENST00000525132 CXXC4Q9H2H0 198 aa3.55□□□□□ -1.84
CSDE1-209ENST00000525132 ABHD16BQ9H3Z7 469 aa3.55□□□□□ -1.84
CSDE1-209ENST00000525132 SFXN1Q9H9B4 322 aa3.55□□□□□ -1.84
CSDE1-209ENST00000525132 ZNF71Q9NQZ8 489 aaPredicted RBP3.55□□□□□ -1.84
CSDE1-209ENST00000525132 C1orf112Q9NSG2 853 aa3.55□□□□□ -1.84
CSDE1-209ENST00000525132 POLR3BQ9NW08 1133 aaPredicted RBP3.55□□□□□ -1.84
CSDE1-209ENST00000525132 UCKL1Q9NWZ5 548 aa3.55□□□□□ -1.84
CSDE1-209ENST00000525132 MAP3K20Q9NYL2 800 aaKnown RBP3.55□□□□□ -1.84
CSDE1-209ENST00000525132 SWAP70Q9UH65 585 aa3.55□□□□□ -1.84
CSDE1-209ENST00000525132 PCDHGA9Q9Y5G4 932 aaKnown RBP3.55□□□□□ -1.84
CSDE1-209ENST00000525132 PCDHGA8Q9Y5G5 932 aa3.55□□□□□ -1.84
CSDE1-209ENST00000525132 PCDHGA7Q9Y5G6 932 aa3.55□□□□□ -1.84
CSDE1-209ENST00000525132 PCDHGA6Q9Y5G7 932 aa3.55□□□□□ -1.84
CSDE1-209ENST00000525132 PCDHGA3Q9Y5H0 932 aa3.55□□□□□ -1.84
CSDE1-209ENST00000525132 KNTC1P50748 2209 aa3.55□□□□□ -1.84
CSDE1-209ENST00000525132 CROCCQ5TZA2 2017 aa3.54□□□□□ -1.84
CSDE1-209ENST00000525132 CACNA1FO60840 1977 aa3.54□□□□□ -1.84
CSDE1-209ENST00000525132 CLUHO75153 1309 aa3.54□□□□□ -1.84
CSDE1-209ENST00000525132 GOLGA8AA7E2F4 631 aa3.54□□□□□ -1.84
CSDE1-209ENST00000525132 GOLGA8BA8MQT2 603 aa3.54□□□□□ -1.84
CSDE1-209ENST00000525132 AP1G1O43747 822 aa3.54□□□□□ -1.84
CSDE1-209ENST00000525132 CUTAO60888 179 aa3.54□□□□□ -1.84
CSDE1-209ENST00000525132 BCKDHBP21953 392 aa3.54□□□□□ -1.84
CSDE1-209ENST00000525132 BDNFP23560 247 aa3.54□□□□□ -1.84
CSDE1-209ENST00000525132 GLRBP48167 497 aa3.54□□□□□ -1.84
CSDE1-209ENST00000525132 ADAM8P78325 824 aa3.54□□□□□ -1.84
CSDE1-209ENST00000525132 PPP2R2BQ00005 443 aa3.54□□□□□ -1.84
CSDE1-209ENST00000525132 CD83Q01151 205 aa3.54□□□□□ -1.84
CSDE1-209ENST00000525132 MRPL49Q13405 166 aaKnown RBP3.54□□□□□ -1.84
CSDE1-209ENST00000525132 ACAP2Q15057 778 aa3.54□□□□□ -1.84
CSDE1-209ENST00000525132 TERF2Q15554 542 aa3.54□□□□□ -1.84
CSDE1-209ENST00000525132 IFIT1BQ5T764 474 aaKnown RBP3.54□□□□□ -1.84
CSDE1-209ENST00000525132 CDC42EP5Q6NZY7 148 aa3.54□□□□□ -1.84
CSDE1-209ENST00000525132 PODNL1Q6PEZ8 512 aa3.54□□□□□ -1.84
CSDE1-209ENST00000525132 TRMT10BQ6PF06 316 aaKnown RBP3.54□□□□□ -1.84
CSDE1-209ENST00000525132 LARP4Q71RC2 724 aaKnown RBP eCLIP3.54□□□□□ -1.848e-15■□□□□ 10
CSDE1-209ENST00000525132 GET4Q7L5D6 327 aaPredicted RBP3.54□□□□□ -1.84
CSDE1-209ENST00000525132 SRLQ86TD4 932 aa3.54□□□□□ -1.84
CSDE1-209ENST00000525132 SYT12Q8IV01 421 aa3.54□□□□□ -1.84
CSDE1-209ENST00000525132 SLC41A1Q8IVJ1 513 aa3.54□□□□□ -1.84
CSDE1-209ENST00000525132 FAM186BQ8IYM0 893 aa3.54□□□□□ -1.84
CSDE1-209ENST00000525132 THNSL1Q8IYQ7 743 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms