RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 SNX9Q9Y5X1 595 aa9.38□□□□□ -0.91
TRAPPC9-212ENST00000521944 STYXL1Q9Y6J8 313 aa9.38□□□□□ -0.91
TRAPPC9-212ENST00000521944 F8P00451 2351 aa9.38□□□□□ -0.91
TRAPPC9-212ENST00000521944 NF1P21359 2839 aa9.38□□□□□ -0.91
TRAPPC9-212ENST00000521944 A0A1W2PPC4 97 aa9.37□□□□□ -0.91
TRAPPC9-212ENST00000521944 BLACEA4D250 179 aa9.37□□□□□ -0.91
TRAPPC9-212ENST00000521944 MEN1O00255 615 aa9.37□□□□□ -0.91
TRAPPC9-212ENST00000521944 SYNCRIPO60506 623 aaKnown RBP9.37□□□□□ -0.91
TRAPPC9-212ENST00000521944 ITGB3P05106 788 aa9.37□□□□□ -0.91
TRAPPC9-212ENST00000521944 PDGFRBP09619 1106 aa9.37□□□□□ -0.91
TRAPPC9-212ENST00000521944 ACADMP11310 421 aa9.37□□□□□ -0.91
TRAPPC9-212ENST00000521944 PCSK1P29120 753 aa9.37□□□□□ -0.91
TRAPPC9-212ENST00000521944 PNPLA4P41247 253 aa9.37□□□□□ -0.91
TRAPPC9-212ENST00000521944 RXRGP48443 463 aa9.37□□□□□ -0.91
TRAPPC9-212ENST00000521944 RNF144AP50876 292 aaPredicted RBP9.37□□□□□ -0.91
TRAPPC9-212ENST00000521944 SLC12A3P55017 1021 aa9.37□□□□□ -0.91
TRAPPC9-212ENST00000521944 CYP27A1Q02318 531 aa9.37□□□□□ -0.91
TRAPPC9-212ENST00000521944 SRSF6Q13247 344 aaKnown RBP9.37□□□□□ -0.91
TRAPPC9-212ENST00000521944 CAMK2GQ13555 558 aaPredicted RBP9.37□□□□□ -0.91
TRAPPC9-212ENST00000521944 KCNJ12Q14500 433 aa9.37□□□□□ -0.91
TRAPPC9-212ENST00000521944 BMP2KLQ5H9B9 411 aa9.37□□□□□ -0.91
TRAPPC9-212ENST00000521944 HECTD3Q5T447 861 aa9.37□□□□□ -0.91
TRAPPC9-212ENST00000521944 TDRD10Q5VZ19 366 aaKnown RBP9.37□□□□□ -0.91
TRAPPC9-212ENST00000521944 IGF2-ASQ6U949 168 aa9.37□□□□□ -0.91
TRAPPC9-212ENST00000521944 CCDC81Q6ZN84 652 aa9.37□□□□□ -0.91
TRAPPC9-212ENST00000521944 ADAT2Q7Z6V5 191 aaKnown RBP9.37□□□□□ -0.91
TRAPPC9-212ENST00000521944 SPATS2Q86XZ4 545 aaKnown RBP9.37□□□□□ -0.91
TRAPPC9-212ENST00000521944 TOP6BLQ8N6T0 577 aa9.37□□□□□ -0.91
TRAPPC9-212ENST00000521944 MYCBPAPQ8TBZ2 947 aa9.37□□□□□ -0.91
TRAPPC9-212ENST00000521944 SNX29Q8TEQ0 813 aa9.37□□□□□ -0.91
TRAPPC9-212ENST00000521944 PIWIL1Q96J94 861 aaKnown RBP9.37□□□□□ -0.91
TRAPPC9-212ENST00000521944 ZNF560Q96MR9 790 aa9.37□□□□□ -0.91
TRAPPC9-212ENST00000521944 SLC46A1Q96NT5 459 aa9.37□□□□□ -0.91
TRAPPC9-212ENST00000521944 SEMA3CQ99985 751 aa9.37□□□□□ -0.91
TRAPPC9-212ENST00000521944 TIPINQ9BVW5 301 aa9.37□□□□□ -0.91
TRAPPC9-212ENST00000521944 ACE2Q9BYF1 805 aaPredicted RBP9.37□□□□□ -0.91
TRAPPC9-212ENST00000521944 IL37Q9NZH6 218 aa9.37□□□□□ -0.91
TRAPPC9-212ENST00000521944 COL27A1Q8IZC6 1860 aaPredicted RBP9.36□□□□□ -0.91
TRAPPC9-212ENST00000521944 PTPRJQ12913 1337 aa9.36□□□□□ -0.91
TRAPPC9-212ENST00000521944 SIGLEC6O43699 453 aa9.36□□□□□ -0.91
TRAPPC9-212ENST00000521944 OPA1O60313 960 aa9.36□□□□□ -0.91
TRAPPC9-212ENST00000521944 PFKFB2O60825 505 aa9.36□□□□□ -0.91
TRAPPC9-212ENST00000521944 CDKL5O76039 1030 aa9.36□□□□□ -0.91
TRAPPC9-212ENST00000521944 YWHAQP27348 245 aa9.36□□□□□ -0.91
TRAPPC9-212ENST00000521944 C21orf59P57076 290 aa9.36□□□□□ -0.91
TRAPPC9-212ENST00000521944 E2F1Q01094 437 aa9.36□□□□□ -0.91
TRAPPC9-212ENST00000521944 GRIN1Q05586 938 aa9.36□□□□□ -0.91
TRAPPC9-212ENST00000521944 IFRD2Q12894 506 aaPredicted RBP9.36□□□□□ -0.91
TRAPPC9-212ENST00000521944 FYB2Q5VWT5 728 aa9.36□□□□□ -0.91
TRAPPC9-212ENST00000521944 SLC25A45Q8N413 288 aa9.36□□□□□ -0.91
TRAPPC9-212ENST00000521944 SYT2Q8N9I0 419 aaPredicted RBP9.36□□□□□ -0.91
TRAPPC9-212ENST00000521944 OR2T3Q8NH03 318 aa9.36□□□□□ -0.91
TRAPPC9-212ENST00000521944 RNF217Q8TC41 542 aa9.36□□□□□ -0.91
TRAPPC9-212ENST00000521944 GLMNQ92990 594 aa9.36□□□□□ -0.91
TRAPPC9-212ENST00000521944 SLITRK1Q96PX8 696 aa9.36□□□□□ -0.91
TRAPPC9-212ENST00000521944 KCNK16Q96T55 309 aa9.36□□□□□ -0.91
TRAPPC9-212ENST00000521944 MMS19Q96T76 1030 aa9.36□□□□□ -0.91
TRAPPC9-212ENST00000521944 ZNF518BQ9C0D4 1074 aa9.36□□□□□ -0.91
TRAPPC9-212ENST00000521944 BTBD1Q9H0C5 482 aa9.36□□□□□ -0.91
TRAPPC9-212ENST00000521944 LHX5Q9H2C1 402 aa9.36□□□□□ -0.91
TRAPPC9-212ENST00000521944 BRMS1Q9HCU9 246 aa9.36□□□□□ -0.91
TRAPPC9-212ENST00000521944 THSD1Q9NS62 852 aa9.36□□□□□ -0.91
TRAPPC9-212ENST00000521944 ELOVL2Q9NXB9 296 aa9.36□□□□□ -0.91
TRAPPC9-212ENST00000521944 KCNG1Q9UIX4 513 aa9.36□□□□□ -0.91
TRAPPC9-212ENST00000521944 CDH9Q9ULB4 789 aa9.36□□□□□ -0.91
TRAPPC9-212ENST00000521944 FAM92AA1XBS5 289 aa9.35□□□□□ -0.91
TRAPPC9-212ENST00000521944 FIGNL2A6NMB9 653 aa9.35□□□□□ -0.91
TRAPPC9-212ENST00000521944 CDRT15L2A8MXV6 281 aa9.35□□□□□ -0.91
TRAPPC9-212ENST00000521944 CLDN5O00501 218 aa9.35□□□□□ -0.91
TRAPPC9-212ENST00000521944 NPC1O15118 1278 aa9.35□□□□□ -0.91
TRAPPC9-212ENST00000521944 CSO75390 466 aaKnown RBP9.35□□□□□ -0.91
TRAPPC9-212ENST00000521944 CDC45O75419 566 aa9.35□□□□□ -0.91
TRAPPC9-212ENST00000521944 PENKP01210 267 aaPredicted RBP9.35□□□□□ -0.91
TRAPPC9-212ENST00000521944 ITGB2P05107 769 aa9.35□□□□□ -0.91
TRAPPC9-212ENST00000521944 EPHX1P07099 455 aa9.35□□□□□ -0.91
TRAPPC9-212ENST00000521944 GIMD1P0DJR0 217 aa9.35□□□□□ -0.91
TRAPPC9-212ENST00000521944 ANXA13P27216 316 aa9.35□□□□□ -0.91
TRAPPC9-212ENST00000521944 TUBP50607 506 aa9.35□□□□□ -0.91
TRAPPC9-212ENST00000521944 BCAT1P54687 386 aa9.35□□□□□ -0.91
TRAPPC9-212ENST00000521944 CDH8P55286 799 aa9.35□□□□□ -0.91
TRAPPC9-212ENST00000521944 NXPH1P58417 271 aa9.35□□□□□ -0.91
TRAPPC9-212ENST00000521944 RPS14P62263 151 aaKnown RBP9.35□□□□□ -0.91
TRAPPC9-212ENST00000521944 TFAMQ00059 246 aaKnown RBP9.35□□□□□ -0.91
TRAPPC9-212ENST00000521944 POU5F1Q01860 360 aaKnown RBP9.35□□□□□ -0.91
TRAPPC9-212ENST00000521944 MDH1BQ5I0G3 518 aa9.35□□□□□ -0.91
TRAPPC9-212ENST00000521944 KIAA0895LQ68EN5 471 aa9.35□□□□□ -0.91
TRAPPC9-212ENST00000521944 ADALQ6DHV7 355 aa9.35□□□□□ -0.91
TRAPPC9-212ENST00000521944 XKR5Q6UX68 686 aa9.35□□□□□ -0.91
TRAPPC9-212ENST00000521944 LYSMD3Q7Z3D4 306 aa9.35□□□□□ -0.91
TRAPPC9-212ENST00000521944 CSGALNACT2Q8N6G5 542 aa9.35□□□□□ -0.91
TRAPPC9-212ENST00000521944 LRRC52Q8N7C0 313 aa9.35□□□□□ -0.91
TRAPPC9-212ENST00000521944 ZNF366Q8N895 744 aa9.35□□□□□ -0.91
TRAPPC9-212ENST00000521944 OVCA2Q8WZ82 227 aa9.35□□□□□ -0.91
TRAPPC9-212ENST00000521944 FBXO32Q969P5 355 aa9.35□□□□□ -0.91
TRAPPC9-212ENST00000521944 B3GNT5Q9BYG0 378 aa9.35□□□□□ -0.91
TRAPPC9-212ENST00000521944 EPN3Q9H201 632 aa9.35□□□□□ -0.91
TRAPPC9-212ENST00000521944 TMEM245Q9H330 911 aa9.35□□□□□ -0.91
TRAPPC9-212ENST00000521944 OSER1Q9NX31 292 aa9.35□□□□□ -0.91
TRAPPC9-212ENST00000521944 EHD2Q9NZN4 543 aa9.35□□□□□ -0.91
TRAPPC9-212ENST00000521944 SERGEFQ9UGK8 458 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms