RNA–Protein interactions for RNA: ENST00000520953.5

SREK1-209, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 5

Gene SREK1, Length 2,172 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-209ENST00000520953 MYEOVQ96EZ4 313 aa15.59■□□□□ 0.09
SREK1-209ENST00000520953 LRCH3Q96II8 777 aa15.59■□□□□ 0.09
SREK1-209ENST00000520953 CSPG4P5Q96PW8 444 aa15.59■□□□□ 0.09
SREK1-209ENST00000520953 LRRC1Q9BTT6 524 aa15.59■□□□□ 0.09
SREK1-209ENST00000520953 PRKD2Q9BZL6 878 aa15.59■□□□□ 0.09
SREK1-209ENST00000520953 DDX47Q9H0S4 455 aaKnown RBP15.59■□□□□ 0.09
SREK1-209ENST00000520953 RNF14Q9UBS8 474 aa15.59■□□□□ 0.09
SREK1-209ENST00000520953 GOLGA6L7A0A1B0GV03 622 aa15.58■□□□□ 0.08
SREK1-209ENST00000520953 CST8O60676 142 aa15.58■□□□□ 0.08
SREK1-209ENST00000520953 IGLV3-27P01718 113 aa15.58■□□□□ 0.08
SREK1-209ENST00000520953 PECAM1P16284 738 aaPredicted RBP15.58■□□□□ 0.08
SREK1-209ENST00000520953 AMPD1P23109 780 aa15.58■□□□□ 0.08
SREK1-209ENST00000520953 IRAK1P51617 712 aa15.58■□□□□ 0.08
SREK1-209ENST00000520953 SCAPQ12770 1279 aa15.58■□□□□ 0.08
SREK1-209ENST00000520953 SEMA3BQ13214 749 aa15.58■□□□□ 0.08
SREK1-209ENST00000520953 TEAD2Q15562 447 aa15.58■□□□□ 0.08
SREK1-209ENST00000520953 ANKRD20A8PQ5CZ79 823 aa15.58■□□□□ 0.08
SREK1-209ENST00000520953 RFX6Q8HWS3 928 aa15.58■□□□□ 0.08
SREK1-209ENST00000520953 HDAC7Q8WUI4 952 aa15.58■□□□□ 0.08
SREK1-209ENST00000520953 ING5Q8WYH8 240 aa15.58■□□□□ 0.08
SREK1-209ENST00000520953 OLA1Q9NTK5 396 aaKnown RBP15.58■□□□□ 0.08
SREK1-209ENST00000520953 BRWD1Q9NSI6 2320 aa15.58■□□□□ 0.08
SREK1-209ENST00000520953 KLKB1P03952 638 aa15.58■□□□□ 0.08
SREK1-209ENST00000520953 MYBL2P10244 700 aa15.58■□□□□ 0.08
SREK1-209ENST00000520953 SNX1Q13596 522 aa15.58■□□□□ 0.08
SREK1-209ENST00000520953 PPP2R5DQ14738 602 aa15.58■□□□□ 0.08
SREK1-209ENST00000520953 CASP8Q14790 479 aa15.58■□□□□ 0.08
SREK1-209ENST00000520953 TTC27Q6P3X3 843 aa15.58■□□□□ 0.08
SREK1-209ENST00000520953 ADAMTS19Q8TE59 1207 aa15.58■□□□□ 0.08
SREK1-209ENST00000520953 RNF157Q96PX1 679 aa15.58■□□□□ 0.08
SREK1-209ENST00000520953 KRT12Q99456 494 aa15.58■□□□□ 0.08
SREK1-209ENST00000520953 NCAPGQ9BPX3 1015 aa15.58■□□□□ 0.08
SREK1-209ENST00000520953 SLC46A2Q9BY10 475 aa15.58■□□□□ 0.08
SREK1-209ENST00000520953 C10orf88Q9H8K7 445 aa15.58■□□□□ 0.08
SREK1-209ENST00000520953 HS3ST4Q9Y661 456 aa15.58■□□□□ 0.08
SREK1-209ENST00000520953 SRGAP2BP0DMP2 458 aa15.57■□□□□ 0.08
SREK1-209ENST00000520953 MBL2P11226 248 aaPredicted RBP15.57■□□□□ 0.08
SREK1-209ENST00000520953 PTPN2P17706 415 aa15.57■□□□□ 0.08
SREK1-209ENST00000520953 OAS2P29728 719 aaKnown RBP15.57■□□□□ 0.08
SREK1-209ENST00000520953 HOXA9P31269 272 aa15.57■□□□□ 0.08
SREK1-209ENST00000520953 KCNJ1P48048 391 aa15.57■□□□□ 0.08
SREK1-209ENST00000520953 EPHA5P54756 1037 aa15.57■□□□□ 0.08
SREK1-209ENST00000520953 DLX2Q07687 328 aaPredicted RBP15.57■□□□□ 0.08
SREK1-209ENST00000520953 PPP2R5EQ16537 467 aa15.57■□□□□ 0.08
SREK1-209ENST00000520953 RARS2Q5T160 578 aaKnown RBP15.57■□□□□ 0.08
SREK1-209ENST00000520953 NADSYN1Q6IA69 706 aa15.57■□□□□ 0.08
SREK1-209ENST00000520953 TP53INP2Q8IXH6 220 aa15.57■□□□□ 0.08
SREK1-209ENST00000520953 GSPT2Q8IYD1 628 aaKnown RBP15.57■□□□□ 0.08
SREK1-209ENST00000520953 ST13P5Q8NFI4 369 aaPredicted RBP15.57■□□□□ 0.08
SREK1-209ENST00000520953 ITFG1Q8TB96 612 aa15.57■□□□□ 0.08
SREK1-209ENST00000520953 ZSWIM3Q96MP5 696 aa15.57■□□□□ 0.08
SREK1-209ENST00000520953 KLF16Q9BXK1 252 aaPredicted RBP15.57■□□□□ 0.08
SREK1-209ENST00000520953 NSUN3Q9H649 340 aaKnown RBP15.57■□□□□ 0.08
SREK1-209ENST00000520953 OR12D3Q9UGF7 316 aa15.57■□□□□ 0.08
SREK1-209ENST00000520953 DMGDHQ9UI17 866 aaKnown RBP15.57■□□□□ 0.08
SREK1-209ENST00000520953 NEU3Q9UQ49 428 aa15.57■□□□□ 0.08
SREK1-209ENST00000520953 LRIG2O94898 1065 aa15.56■□□□□ 0.08
SREK1-209ENST00000520953 HNRNPA1P09651 372 aaKnown RBP eCLIP15.56■□□□□ 0.08
SREK1-209ENST00000520953 HDCP19113 662 aa15.56■□□□□ 0.08
SREK1-209ENST00000520953 PTPN7P35236 360 aa15.56■□□□□ 0.08
SREK1-209ENST00000520953 TUBP50607 506 aa15.56■□□□□ 0.08
SREK1-209ENST00000520953 COPS2P61201 443 aa15.56■□□□□ 0.08
SREK1-209ENST00000520953 CBX2Q14781 532 aaPredicted RBP15.56■□□□□ 0.08
SREK1-209ENST00000520953 PDK2Q15119 407 aa15.56■□□□□ 0.08
SREK1-209ENST00000520953 ARL13BQ3SXY8 428 aa15.56■□□□□ 0.08
SREK1-209ENST00000520953 PRSS36Q5K4E3 855 aa15.56■□□□□ 0.08
SREK1-209ENST00000520953 BRMS1LQ5PSV4 323 aa15.56■□□□□ 0.08
SREK1-209ENST00000520953 CCDC70Q6NSX1 233 aa15.56■□□□□ 0.08
SREK1-209ENST00000520953 C1orf228Q6PIY5 440 aa15.56■□□□□ 0.08
SREK1-209ENST00000520953 CCNI2Q6ZMN8 369 aaPredicted RBP15.56■□□□□ 0.08
SREK1-209ENST00000520953 PDZD4Q76G19 769 aaPredicted RBP15.56■□□□□ 0.08
SREK1-209ENST00000520953 PLD5Q8N7P1 536 aa15.56■□□□□ 0.08
SREK1-209ENST00000520953 RIN3Q8TB24 985 aa15.56■□□□□ 0.08
SREK1-209ENST00000520953 UBE2Q2Q8WVN8 375 aa15.56■□□□□ 0.08
SREK1-209ENST00000520953 SMG7Q92540 1137 aaKnown RBP15.56■□□□□ 0.08
SREK1-209ENST00000520953 MRPS31Q92665 395 aaKnown RBP15.56■□□□□ 0.08
SREK1-209ENST00000520953 FAF2Q96CS3 445 aa15.56■□□□□ 0.08
SREK1-209ENST00000520953 ARHGEF4Q9NR80 690 aa15.56■□□□□ 0.08
SREK1-209ENST00000520953 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.56■□□□□ 0.08
SREK1-209ENST00000520953 ZDHHC7Q9NXF8 308 aa15.56■□□□□ 0.08
SREK1-209ENST00000520953 CCL26Q9Y258 94 aa15.56■□□□□ 0.08
SREK1-209ENST00000520953 CPQQ9Y646 472 aa15.56■□□□□ 0.08
SREK1-209ENST00000520953 H3BQF6 201 aa15.56■□□□□ 0.08
SREK1-209ENST00000520953 STC2O76061 302 aa15.56■□□□□ 0.08
SREK1-209ENST00000520953 OLFM2O95897 454 aa15.56■□□□□ 0.08
SREK1-209ENST00000520953 C1RP00736 705 aa15.56■□□□□ 0.08
SREK1-209ENST00000520953 CEBPBP17676 345 aa15.56■□□□□ 0.08
SREK1-209ENST00000520953 PABPC1LQ4VXU2 614 aaKnown RBP15.56■□□□□ 0.08
SREK1-209ENST00000520953 MS4A13Q5J8X5 152 aa15.56■□□□□ 0.08
SREK1-209ENST00000520953 GPR158Q5T848 1215 aa15.56■□□□□ 0.08
SREK1-209ENST00000520953 RAP1GAP2Q684P5 730 aa15.56■□□□□ 0.08
SREK1-209ENST00000520953 KLHDC10Q6PID8 442 aa15.56■□□□□ 0.08
SREK1-209ENST00000520953 ZNF276Q8N554 614 aa15.56■□□□□ 0.08
SREK1-209ENST00000520953 ZNF670Q9BS34 389 aa15.56■□□□□ 0.08
SREK1-209ENST00000520953 EEF2KO00418 725 aaKnown RBP15.55■□□□□ 0.08
SREK1-209ENST00000520953 TRDMT1O14717 391 aaKnown RBP15.55■□□□□ 0.08
SREK1-209ENST00000520953 XYLBO75191 536 aa15.55■□□□□ 0.08
SREK1-209ENST00000520953 CKMP06732 381 aa15.55■□□□□ 0.08
SREK1-209ENST00000520953 CDC25CP30307 473 aa15.55■□□□□ 0.08
SREK1-209ENST00000520953 PPP3CCP48454 512 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms