RNA–Protein interactions for RNA: ENST00000520267.5

COL13A1-213, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-213ENST00000520267 CDH9Q9ULB4 789 aa26.54■■□□□ 1.84
COL13A1-213ENST00000520267 GIT1Q9Y2X7 761 aa26.54■■□□□ 1.84
COL13A1-213ENST00000520267 DCLK1O15075 740 aa26.53■■□□□ 1.84
COL13A1-213ENST00000520267 MGRN1O60291 552 aa26.53■■□□□ 1.84
COL13A1-213ENST00000520267 GLUD2P49448 558 aa26.53■■□□□ 1.84
COL13A1-213ENST00000520267 BMPR2Q13873 1038 aa26.53■■□□□ 1.84
COL13A1-213ENST00000520267 TIGD5Q53EQ6 642 aa26.53■■□□□ 1.84
COL13A1-213ENST00000520267 CDHR3Q6ZTQ4 885 aa26.53■■□□□ 1.84
COL13A1-213ENST00000520267 CCNYQ8ND76 341 aa26.53■■□□□ 1.84
COL13A1-213ENST00000520267 SEPT10Q9P0V9 454 aa26.53■■□□□ 1.84
COL13A1-213ENST00000520267 SF3B1O75533 1304 aaKnown RBP eCLIP26.53■■□□□ 1.84
COL13A1-213ENST00000520267 HHLA1C9JL84 531 aa26.53■■□□□ 1.84
COL13A1-213ENST00000520267 I3L4J1 428 aa26.53■■□□□ 1.84
COL13A1-213ENST00000520267 NQO1P15559 274 aaKnown RBP26.53■■□□□ 1.84
COL13A1-213ENST00000520267 PDK1Q15118 436 aa26.53■■□□□ 1.84
COL13A1-213ENST00000520267 TTC17Q96AE7 1141 aa26.53■■□□□ 1.84
COL13A1-213ENST00000520267 ARHGAP39Q9C0H5 1083 aa26.53■■□□□ 1.84
COL13A1-213ENST00000520267 NPHS2Q9NP85 383 aa26.53■■□□□ 1.84
COL13A1-213ENST00000520267 CNGB3Q9NQW8 809 aa26.53■■□□□ 1.84
COL13A1-213ENST00000520267 TRIM33Q9UPN9 1127 aa26.53■■□□□ 1.84
COL13A1-213ENST00000520267 WDR27A2RRH5 827 aa26.52■■□□□ 1.84
COL13A1-213ENST00000520267 IBSPP21815 317 aaPredicted RBP26.52■■□□□ 1.84
COL13A1-213ENST00000520267 SARNPP82979 210 aaKnown RBP26.52■■□□□ 1.84
COL13A1-213ENST00000520267 WASHC5Q12768 1159 aa26.52■■□□□ 1.84
COL13A1-213ENST00000520267 UPP1Q16831 310 aa26.52■■□□□ 1.84
COL13A1-213ENST00000520267 OXNAD1Q96HP4 312 aaPredicted RBP26.52■■□□□ 1.84
COL13A1-213ENST00000520267 SLC9A7Q96T83 725 aa26.52■■□□□ 1.84
COL13A1-213ENST00000520267 PIH1D1Q9NWS0 290 aaKnown RBP26.52■■□□□ 1.84
COL13A1-213ENST00000520267 GABRQQ9UN88 632 aa26.52■■□□□ 1.84
COL13A1-213ENST00000520267 C9IYK1 514 aa26.51■■□□□ 1.84
COL13A1-213ENST00000520267 COPEO14579 308 aa26.51■■□□□ 1.84
COL13A1-213ENST00000520267 RFPL1O75677 317 aa26.51■■□□□ 1.84
COL13A1-213ENST00000520267 SLC10A3P09131 477 aa26.51■■□□□ 1.84
COL13A1-213ENST00000520267 NCAM1P13591 858 aa26.51■■□□□ 1.84
COL13A1-213ENST00000520267 CRADDP78560 199 aa26.51■■□□□ 1.84
COL13A1-213ENST00000520267 OVGP1Q12889 678 aa26.51■■□□□ 1.84
COL13A1-213ENST00000520267 LGSNQ5TDP6 509 aa26.51■■□□□ 1.84
COL13A1-213ENST00000520267 MRPL10Q7Z7H8 261 aaKnown RBP26.51■■□□□ 1.84
COL13A1-213ENST00000520267 CHSY1Q86X52 802 aa26.51■■□□□ 1.84
COL13A1-213ENST00000520267 KIF2BQ8N4N8 673 aa26.51■■□□□ 1.84
COL13A1-213ENST00000520267 KLHL29Q96CT2 875 aa26.51■■□□□ 1.84
COL13A1-213ENST00000520267 ERP27Q96DN0 273 aa26.51■■□□□ 1.84
COL13A1-213ENST00000520267 STAMBPL1Q96FJ0 436 aa26.51■■□□□ 1.84
COL13A1-213ENST00000520267 SRPK1Q96SB4 655 aaKnown RBP26.51■■□□□ 1.84
COL13A1-213ENST00000520267 RTP3Q9BQQ7 232 aa26.51■■□□□ 1.84
COL13A1-213ENST00000520267 UPF3AQ9H1J1 476 aaKnown RBP26.51■■□□□ 1.84
COL13A1-213ENST00000520267 PTCH2Q9Y6C5 1203 aa26.51■■□□□ 1.84
COL13A1-213ENST00000520267 GPR182O15218 404 aa26.51■■□□□ 1.83
COL13A1-213ENST00000520267 MGEA5O60502 916 aa26.51■■□□□ 1.83
COL13A1-213ENST00000520267 OPHN1O60890 802 aa26.51■■□□□ 1.83
COL13A1-213ENST00000520267 STK10O94804 968 aaKnown RBP26.51■■□□□ 1.83
COL13A1-213ENST00000520267 PSMB4P28070 264 aa26.51■■□□□ 1.83
COL13A1-213ENST00000520267 SETDB1Q15047 1291 aa26.51■■□□□ 1.83
COL13A1-213ENST00000520267 ASRGL1Q7L266 308 aa26.51■■□□□ 1.83
COL13A1-213ENST00000520267 BHLHA9Q7RTU4 235 aa26.51■■□□□ 1.83
COL13A1-213ENST00000520267 ZNF567Q8N184 647 aa26.51■■□□□ 1.83
COL13A1-213ENST00000520267 NTAN1Q96AB6 310 aa26.51■■□□□ 1.83
COL13A1-213ENST00000520267 PPP1R12AO14974 1030 aaPredicted RBP26.5■■□□□ 1.83
COL13A1-213ENST00000520267 LTFP02788 710 aa26.5■■□□□ 1.83
COL13A1-213ENST00000520267 MLNP12872 115 aa26.5■■□□□ 1.83
COL13A1-213ENST00000520267 ERCC2P18074 760 aa26.5■■□□□ 1.83
COL13A1-213ENST00000520267 CD52P31358 61 aa26.5■■□□□ 1.83
COL13A1-213ENST00000520267 RPL9P32969 192 aaKnown RBP26.5■■□□□ 1.83
COL13A1-213ENST00000520267 INHBEP58166 350 aa26.5■■□□□ 1.83
COL13A1-213ENST00000520267 CDK16Q00536 496 aa26.5■■□□□ 1.83
COL13A1-213ENST00000520267 TRIM32Q13049 653 aa26.5■■□□□ 1.83
COL13A1-213ENST00000520267 PAN2Q504Q3 1202 aaKnown RBP26.5■■□□□ 1.83
COL13A1-213ENST00000520267 PLEKHG4Q58EX7 1191 aa26.5■■□□□ 1.83
COL13A1-213ENST00000520267 LRRC8BQ6P9F7 803 aa26.5■■□□□ 1.83
COL13A1-213ENST00000520267 UNC5BQ8IZJ1 945 aa26.5■■□□□ 1.83
COL13A1-213ENST00000520267 LRRC37BQ96QE4 947 aa26.5■■□□□ 1.83
COL13A1-213ENST00000520267 MOCS1Q9NZB8 636 aa26.5■■□□□ 1.83
COL13A1-213ENST00000520267 FBXW11Q9UKB1 542 aa26.5■■□□□ 1.83
COL13A1-213ENST00000520267 HMX2A2RU54 273 aa26.5■■□□□ 1.83
COL13A1-213ENST00000520267 MNAT1P51948 309 aa26.5■■□□□ 1.83
COL13A1-213ENST00000520267 SEMA3BQ13214 749 aa26.5■■□□□ 1.83
COL13A1-213ENST00000520267 SNCBQ16143 134 aa26.5■■□□□ 1.83
COL13A1-213ENST00000520267 EIF2B3Q9NR50 452 aaKnown RBP26.5■■□□□ 1.83
COL13A1-213ENST00000520267 PADI3Q9ULW8 664 aa26.5■■□□□ 1.83
COL13A1-213ENST00000520267 POMCP01189 267 aa26.49■■□□□ 1.83
COL13A1-213ENST00000520267 CCNB1P14635 433 aa26.49■■□□□ 1.83
COL13A1-213ENST00000520267 ALDH3A1P30838 453 aa26.49■■□□□ 1.83
COL13A1-213ENST00000520267 THPOP40225 353 aa26.49■■□□□ 1.83
COL13A1-213ENST00000520267 FYB2Q5VWT5 728 aa26.49■■□□□ 1.83
COL13A1-213ENST00000520267 MFSD14CQ5VZR4 134 aa26.49■■□□□ 1.83
COL13A1-213ENST00000520267 STEAP4Q687X5 459 aa26.49■■□□□ 1.83
COL13A1-213ENST00000520267 RFWD2Q8NHY2 731 aa26.49■■□□□ 1.83
COL13A1-213ENST00000520267 DEPDC1BQ8WUY9 529 aa26.49■■□□□ 1.83
COL13A1-213ENST00000520267 EDEM1Q92611 657 aa26.49■■□□□ 1.83
COL13A1-213ENST00000520267 MYLPFQ96A32 169 aa26.49■■□□□ 1.83
COL13A1-213ENST00000520267 CD248Q9HCU0 757 aa26.49■■□□□ 1.83
COL13A1-213ENST00000520267 ARHGEF3Q9NR81 526 aa26.49■■□□□ 1.83
COL13A1-213ENST00000520267 DDIT4Q9NX09 232 aa26.49■■□□□ 1.83
COL13A1-213ENST00000520267 DCTN3O75935 186 aa26.49■■□□□ 1.83
COL13A1-213ENST00000520267 KRT38O76015 456 aa26.49■■□□□ 1.83
COL13A1-213ENST00000520267 BGNP21810 368 aa26.49■■□□□ 1.83
COL13A1-213ENST00000520267 MGAT1P26572 445 aa26.49■■□□□ 1.83
COL13A1-213ENST00000520267 CCNFP41002 786 aa26.49■■□□□ 1.83
COL13A1-213ENST00000520267 SESN2P58004 480 aaPredicted RBP26.49■■□□□ 1.83
COL13A1-213ENST00000520267 SCAPQ12770 1279 aa26.49■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms