RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 ATXN2LQ8WWM7 1075 aaKnown RBP18.43■□□□□ 0.54
SDC2-205ENST00000520233 NXPE3Q969Y0 559 aa18.43■□□□□ 0.54
SDC2-205ENST00000520233 OTUB2Q96DC9 234 aa18.43■□□□□ 0.54
SDC2-205ENST00000520233 KXD1Q9BQD3 176 aa18.43■□□□□ 0.54
SDC2-205ENST00000520233 PLA2G2FQ9BZM2 168 aa18.43■□□□□ 0.54
SDC2-205ENST00000520233 DDX56Q9NY93 547 aaKnown RBP18.43■□□□□ 0.54
SDC2-205ENST00000520233 PRKAG3Q9UGI9 489 aa18.43■□□□□ 0.54
SDC2-205ENST00000520233 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.43■□□□□ 0.54
SDC2-205ENST00000520233 PCDHA3Q9Y5H8 950 aa18.43■□□□□ 0.54
SDC2-205ENST00000520233 HS3ST4Q9Y661 456 aa18.43■□□□□ 0.54
SDC2-205ENST00000520233 NUMBLQ9Y6R0 609 aa18.43■□□□□ 0.54
SDC2-205ENST00000520233 DOCK8Q8NF50 2099 aa18.42■□□□□ 0.54
SDC2-205ENST00000520233 LOC730098B7Z3J9 87 aa18.42■□□□□ 0.54
SDC2-205ENST00000520233 SCAMP3O14828 347 aaKnown RBP18.42■□□□□ 0.54
SDC2-205ENST00000520233 TNNT1P13805 278 aa18.42■□□□□ 0.54
SDC2-205ENST00000520233 PSMC3P17980 439 aa18.42■□□□□ 0.54
SDC2-205ENST00000520233 CHKAP35790 457 aa18.42■□□□□ 0.54
SDC2-205ENST00000520233 GJC1P36383 396 aa18.42■□□□□ 0.54
SDC2-205ENST00000520233 NRG1Q02297 640 aaPredicted RBP18.42■□□□□ 0.54
SDC2-205ENST00000520233 FCHO2Q0JRZ9 810 aa18.42■□□□□ 0.54
SDC2-205ENST00000520233 SMTNL2Q2TAL5 461 aa18.42■□□□□ 0.54
SDC2-205ENST00000520233 ATP13A4Q4VNC1 1196 aa18.42■□□□□ 0.54
SDC2-205ENST00000520233 FAM133BQ5BKY9 247 aaKnown RBP18.42■□□□□ 0.54
SDC2-205ENST00000520233 PIK3R6Q5UE93 754 aa18.42■□□□□ 0.54
SDC2-205ENST00000520233 CPXM2Q8N436 756 aa18.42■□□□□ 0.54
SDC2-205ENST00000520233 ST13P5Q8NFI4 369 aaPredicted RBP18.42■□□□□ 0.54
SDC2-205ENST00000520233 OSCP1Q8WVF1 389 aa18.42■□□□□ 0.54
SDC2-205ENST00000520233 HSPH1Q92598 858 aa18.42■□□□□ 0.54
SDC2-205ENST00000520233 HES6Q96HZ4 224 aa18.42■□□□□ 0.54
SDC2-205ENST00000520233 PRMT1Q99873 361 aaKnown RBP18.42■□□□□ 0.54
SDC2-205ENST00000520233 MAGEB5Q9BZ81 275 aa18.42■□□□□ 0.54
SDC2-205ENST00000520233 SIK2Q9H0K1 926 aa18.42■□□□□ 0.54
SDC2-205ENST00000520233 DHX35Q9H5Z1 703 aaKnown RBP18.42■□□□□ 0.54
SDC2-205ENST00000520233 GPATCH2LQ9NWQ4 482 aa18.42■□□□□ 0.54
SDC2-205ENST00000520233 REV3LO60673 3130 aa18.41■□□□□ 0.54
SDC2-205ENST00000520233 GOLGA6L7A0A1B0GV03 622 aa18.41■□□□□ 0.54
SDC2-205ENST00000520233 TACR2P21452 398 aa18.41■□□□□ 0.54
SDC2-205ENST00000520233 SLC6A4P31645 630 aa18.41■□□□□ 0.54
SDC2-205ENST00000520233 L1CAMP32004 1257 aa18.41■□□□□ 0.54
SDC2-205ENST00000520233 GNG11P61952 73 aa18.41■□□□□ 0.54
SDC2-205ENST00000520233 SEMA3BQ13214 749 aa18.41■□□□□ 0.54
SDC2-205ENST00000520233 DPYSL2Q16555 572 aa18.41■□□□□ 0.54
SDC2-205ENST00000520233 CA9Q16790 459 aa18.41■□□□□ 0.54
SDC2-205ENST00000520233 RAP1GAP2Q684P5 730 aa18.41■□□□□ 0.54
SDC2-205ENST00000520233 CHSY1Q86X52 802 aa18.41■□□□□ 0.54
SDC2-205ENST00000520233 ADHFE1Q8IWW8 467 aa18.41■□□□□ 0.54
SDC2-205ENST00000520233 YAF2Q8IY57 180 aa18.41■□□□□ 0.54
SDC2-205ENST00000520233 PYROXD2Q8N2H3 581 aa18.41■□□□□ 0.54
SDC2-205ENST00000520233 UBL4BQ8N7F7 174 aa18.41■□□□□ 0.54
SDC2-205ENST00000520233 FAM71BQ8TC56 605 aa18.41■□□□□ 0.54
SDC2-205ENST00000520233 KRT35Q92764 455 aa18.41■□□□□ 0.54
SDC2-205ENST00000520233 RPP25Q9BUL9 199 aaKnown RBP18.41■□□□□ 0.54
SDC2-205ENST00000520233 LINC00597Q9H2U6 94 aa18.41■□□□□ 0.54
SDC2-205ENST00000520233 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.41■□□□□ 0.54
SDC2-205ENST00000520233 DUS2Q9NX74 493 aaKnown RBP18.41■□□□□ 0.54
SDC2-205ENST00000520233 IGSF9Q9P2J2 1179 aa18.41■□□□□ 0.54
SDC2-205ENST00000520233 OR12D3Q9UGF7 316 aa18.41■□□□□ 0.54
SDC2-205ENST00000520233 LIMD1Q9UGP4 676 aa18.41■□□□□ 0.54
SDC2-205ENST00000520233 PACSIN2Q9UNF0 486 aaPredicted RBP18.41■□□□□ 0.54
SDC2-205ENST00000520233 JRKLQ9Y4A0 524 aa18.41■□□□□ 0.54
SDC2-205ENST00000520233 WNT6Q9Y6F9 365 aa18.41■□□□□ 0.54
SDC2-205ENST00000520233 BRWD1Q9NSI6 2320 aa18.41■□□□□ 0.54
SDC2-205ENST00000520233 GFRA2O00451 464 aa18.4■□□□□ 0.54
SDC2-205ENST00000520233 DDX3YO15523 660 aaKnown RBP18.4■□□□□ 0.54
SDC2-205ENST00000520233 IFNAR2P48551 515 aa18.4■□□□□ 0.54
SDC2-205ENST00000520233 MARCKSL1P49006 195 aa18.4■□□□□ 0.54
SDC2-205ENST00000520233 PEX5P50542 639 aa18.4■□□□□ 0.54
SDC2-205ENST00000520233 ARSEP51690 589 aa18.4■□□□□ 0.54
SDC2-205ENST00000520233 ZNF135P52742 658 aaPredicted RBP18.4■□□□□ 0.54
SDC2-205ENST00000520233 AUHQ13825 339 aaKnown RBP18.4■□□□□ 0.54
SDC2-205ENST00000520233 PDK2Q15119 407 aa18.4■□□□□ 0.54
SDC2-205ENST00000520233 PDGFRLQ15198 375 aa18.4■□□□□ 0.54
SDC2-205ENST00000520233 RPS6KA1Q15418 735 aa18.4■□□□□ 0.54
SDC2-205ENST00000520233 KATNAL2Q8IYT4 538 aa18.4■□□□□ 0.54
SDC2-205ENST00000520233 KCTD6Q8NC69 237 aa18.4■□□□□ 0.54
SDC2-205ENST00000520233 KCTD15Q96SI1 283 aaPredicted RBP18.4■□□□□ 0.54
SDC2-205ENST00000520233 FAM83CQ9BQN1 747 aa18.4■□□□□ 0.54
SDC2-205ENST00000520233 TRMT61BQ9BVS5 477 aaKnown RBP18.4■□□□□ 0.54
SDC2-205ENST00000520233 TLR10Q9BXR5 811 aa18.4■□□□□ 0.54
SDC2-205ENST00000520233 PCDH18Q9HCL0 1135 aa18.4■□□□□ 0.54
SDC2-205ENST00000520233 SNX10Q9Y5X0 201 aa18.4■□□□□ 0.54
SDC2-205ENST00000520233 E9PAM4 449 aa18.39■□□□□ 0.53
SDC2-205ENST00000520233 F5H5T6 163 aa18.39■□□□□ 0.53
SDC2-205ENST00000520233 FAM72CH0Y354 149 aa18.39■□□□□ 0.53
SDC2-205ENST00000520233 CHADO15335 359 aa18.39■□□□□ 0.53
SDC2-205ENST00000520233 KRT1P04264 644 aa18.39■□□□□ 0.53
SDC2-205ENST00000520233 KDELR1P24390 212 aa18.39■□□□□ 0.53
SDC2-205ENST00000520233 HTR7P34969 479 aa18.39■□□□□ 0.53
SDC2-205ENST00000520233 CDH6P55285 790 aa18.39■□□□□ 0.53
SDC2-205ENST00000520233 RWDD2BP57060 319 aa18.39■□□□□ 0.53
SDC2-205ENST00000520233 GRM2Q14416 872 aa18.39■□□□□ 0.53
SDC2-205ENST00000520233 KRT81Q14533 505 aa18.39■□□□□ 0.53
SDC2-205ENST00000520233 EML3Q32P44 896 aa18.39■□□□□ 0.53
SDC2-205ENST00000520233 ZFYVE27Q5T4F4 411 aa18.39■□□□□ 0.53
SDC2-205ENST00000520233 FAM72AQ5TYM5 149 aa18.39■□□□□ 0.53
SDC2-205ENST00000520233 MANEALQ5VSG8 457 aa18.39■□□□□ 0.53
SDC2-205ENST00000520233 FAM72DQ6L9T8 149 aa18.39■□□□□ 0.53
SDC2-205ENST00000520233 FBXL22Q6P050 247 aa18.39■□□□□ 0.53
SDC2-205ENST00000520233 LRRC31Q6UY01 552 aa18.39■□□□□ 0.53
SDC2-205ENST00000520233 NYAP1Q6ZVC0 841 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms