RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 SIPA1Q96FS4 1042 aa12.96□□□□□ -0.33
CSMD1-205ENST00000519623 GTPBP2Q9BX10 602 aaKnown RBP12.96□□□□□ -0.33
CSMD1-205ENST00000519623 GPR174Q9BXC1 333 aa12.96□□□□□ -0.33
CSMD1-205ENST00000519623 SRRTQ9BXP5 876 aaKnown RBP12.96□□□□□ -0.33
CSMD1-205ENST00000519623 TMEM245Q9H330 911 aa12.96□□□□□ -0.33
CSMD1-205ENST00000519623 CTNND2Q9UQB3 1225 aa12.96□□□□□ -0.33
CSMD1-205ENST00000519623 FRYQ5TBA9 3013 aa12.95□□□□□ -0.34
CSMD1-205ENST00000519623 FBXO21O94952 628 aa12.95□□□□□ -0.34
CSMD1-205ENST00000519623 GNA14O95837 355 aa12.95□□□□□ -0.34
CSMD1-205ENST00000519623 EPHX1P07099 455 aa12.95□□□□□ -0.34
CSMD1-205ENST00000519623 HLA-EP13747 358 aa12.95□□□□□ -0.34
CSMD1-205ENST00000519623 CD59P13987 128 aa12.95□□□□□ -0.34
CSMD1-205ENST00000519623 OXTRP30559 389 aa12.95□□□□□ -0.34
CSMD1-205ENST00000519623 SLC6A4P31645 630 aa12.95□□□□□ -0.34
CSMD1-205ENST00000519623 GPD2P43304 727 aa12.95□□□□□ -0.34
CSMD1-205ENST00000519623 ATXN3P54252 364 aaPredicted RBP12.95□□□□□ -0.34
CSMD1-205ENST00000519623 RING1Q06587 406 aa12.95□□□□□ -0.34
CSMD1-205ENST00000519623 FOXC1Q12948 553 aa12.95□□□□□ -0.34
CSMD1-205ENST00000519623 CAMK2GQ13555 558 aaPredicted RBP12.95□□□□□ -0.34
CSMD1-205ENST00000519623 PTPRNQ16849 979 aa12.95□□□□□ -0.34
CSMD1-205ENST00000519623 FAM133BQ5BKY9 247 aaKnown RBP12.95□□□□□ -0.34
CSMD1-205ENST00000519623 WDR45BQ5MNZ6 344 aa12.95□□□□□ -0.34
CSMD1-205ENST00000519623 MPP7Q5T2T1 576 aa12.95□□□□□ -0.34
CSMD1-205ENST00000519623 SYCP2LQ5T4T6 812 aa12.95□□□□□ -0.34
CSMD1-205ENST00000519623 RFWD3Q6PCD5 774 aa12.95□□□□□ -0.34
CSMD1-205ENST00000519623 CHST9Q7L1S5 443 aa12.95□□□□□ -0.34
CSMD1-205ENST00000519623 UNC45BQ8IWX7 931 aa12.95□□□□□ -0.34
CSMD1-205ENST00000519623 SCUBE3Q8IX30 993 aa12.95□□□□□ -0.34
CSMD1-205ENST00000519623 RGL4Q8IZJ4 473 aa12.95□□□□□ -0.34
CSMD1-205ENST00000519623 MINDY1Q8N5J2 469 aa12.95□□□□□ -0.34
CSMD1-205ENST00000519623 CADM4Q8NFZ8 388 aa12.95□□□□□ -0.34
CSMD1-205ENST00000519623 WFDC5Q8TCV5 224 aa12.95□□□□□ -0.34
CSMD1-205ENST00000519623 WFIKKN2Q8TEU8 576 aa12.95□□□□□ -0.34
CSMD1-205ENST00000519623 CYB5D2Q8WUJ1 264 aa12.95□□□□□ -0.34
CSMD1-205ENST00000519623 PRCCQ92733 491 aaPredicted RBP12.95□□□□□ -0.34
CSMD1-205ENST00000519623 LMLNQ96KR4 655 aa12.95□□□□□ -0.34
CSMD1-205ENST00000519623 IRX2Q9BZI1 471 aaPredicted RBP12.95□□□□□ -0.34
CSMD1-205ENST00000519623 MIS12Q9H081 205 aa12.95□□□□□ -0.34
CSMD1-205ENST00000519623 SLC32A1Q9H598 525 aa12.95□□□□□ -0.34
CSMD1-205ENST00000519623 ABCB8Q9NUT2 735 aa12.95□□□□□ -0.34
CSMD1-205ENST00000519623 DNAAF2Q9NVR5 837 aaKnown RBP12.95□□□□□ -0.34
CSMD1-205ENST00000519623 NFE2L3Q9Y4A8 694 aa12.95□□□□□ -0.34
CSMD1-205ENST00000519623 METTL12A8MUP2 240 aa12.94□□□□□ -0.34
CSMD1-205ENST00000519623 ACSL4O60488 711 aa12.94□□□□□ -0.34
CSMD1-205ENST00000519623 OPHN1O60890 802 aa12.94□□□□□ -0.34
CSMD1-205ENST00000519623 GJB3O75712 270 aa12.94□□□□□ -0.34
CSMD1-205ENST00000519623 AFPP02771 609 aaKnown RBP12.94□□□□□ -0.34
CSMD1-205ENST00000519623 SYPP08247 313 aa12.94□□□□□ -0.34
CSMD1-205ENST00000519623 PABPC1P11940 636 aaKnown RBP12.94□□□□□ -0.34
CSMD1-205ENST00000519623 SPINK2P20155 84 aa12.94□□□□□ -0.34
CSMD1-205ENST00000519623 TBX4P57082 545 aa12.94□□□□□ -0.34
CSMD1-205ENST00000519623 PAK1Q13153 545 aa12.94□□□□□ -0.34
CSMD1-205ENST00000519623 PLEKHG6Q3KR16 790 aa12.94□□□□□ -0.34
CSMD1-205ENST00000519623 NUGGCQ68CJ6 796 aa12.94□□□□□ -0.34
CSMD1-205ENST00000519623 NADSYN1Q6IA69 706 aa12.94□□□□□ -0.34
CSMD1-205ENST00000519623 SERPINA13PQ6UXR4 307 aa12.94□□□□□ -0.34
CSMD1-205ENST00000519623 HDDC3Q8N4P3 179 aa12.94□□□□□ -0.34
CSMD1-205ENST00000519623 OR2T3Q8NH03 318 aa12.94□□□□□ -0.34
CSMD1-205ENST00000519623 C1orf216Q8TAB5 229 aa12.94□□□□□ -0.34
CSMD1-205ENST00000519623 MYEOVQ96EZ4 313 aa12.94□□□□□ -0.34
CSMD1-205ENST00000519623 FCRL2Q96LA5 508 aaPredicted RBP12.94□□□□□ -0.34
CSMD1-205ENST00000519623 NUP58Q9BVL2 599 aa12.94□□□□□ -0.34
CSMD1-205ENST00000519623 INTS2Q9H0H0 1204 aaKnown RBP12.94□□□□□ -0.34
CSMD1-205ENST00000519623 UBE2TQ9NPD8 197 aaPredicted RBP12.94□□□□□ -0.34
CSMD1-205ENST00000519623 SUSD2Q9UGT4 822 aa12.94□□□□□ -0.34
CSMD1-205ENST00000519623 GGA2Q9UJY4 613 aa12.94□□□□□ -0.34
CSMD1-205ENST00000519623 PLA2G4CQ9UP65 541 aa12.94□□□□□ -0.34
CSMD1-205ENST00000519623 NAALADL1Q9UQQ1 740 aa12.94□□□□□ -0.34
CSMD1-205ENST00000519623 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.94□□□□□ -0.34
CSMD1-205ENST00000519623 AKAP13Q12802 2813 aa12.93□□□□□ -0.34
CSMD1-205ENST00000519623 SPAARA0A1B0GVQ0 90 aa12.93□□□□□ -0.34
CSMD1-205ENST00000519623 IRAK2O43187 625 aa12.93□□□□□ -0.34
CSMD1-205ENST00000519623 TBL1XO60907 577 aa12.93□□□□□ -0.34
CSMD1-205ENST00000519623 PROS1P07225 676 aa12.93□□□□□ -0.34
CSMD1-205ENST00000519623 DLDP09622 509 aaKnown RBP12.93□□□□□ -0.34
CSMD1-205ENST00000519623 GNSP15586 552 aa12.93□□□□□ -0.34
CSMD1-205ENST00000519623 CD70P32970 193 aa12.93□□□□□ -0.34
CSMD1-205ENST00000519623 SLC11A2P49281 568 aa12.93□□□□□ -0.34
CSMD1-205ENST00000519623 FAM193AP78312 1265 aa12.93□□□□□ -0.34
CSMD1-205ENST00000519623 ARID5AQ03989 594 aa12.93□□□□□ -0.34
CSMD1-205ENST00000519623 FNDC3BQ53EP0 1204 aaKnown RBP12.93□□□□□ -0.34
CSMD1-205ENST00000519623 DCAF12L1Q5VU92 463 aa12.93□□□□□ -0.34
CSMD1-205ENST00000519623 SYPL2Q5VXT5 272 aa12.93□□□□□ -0.34
CSMD1-205ENST00000519623 MBLAC2Q68D91 279 aa12.93□□□□□ -0.34
CSMD1-205ENST00000519623 DENND1BQ6P3S1 775 aa12.93□□□□□ -0.34
CSMD1-205ENST00000519623 AHI1Q8N157 1196 aa12.93□□□□□ -0.34
CSMD1-205ENST00000519623 ZNF366Q8N895 744 aa12.93□□□□□ -0.34
CSMD1-205ENST00000519623 FIBINQ8TAL6 211 aa12.93□□□□□ -0.34
CSMD1-205ENST00000519623 DQX1Q8TE96 717 aaKnown RBP12.93□□□□□ -0.34
CSMD1-205ENST00000519623 STK32AQ8WU08 396 aa12.93□□□□□ -0.34
CSMD1-205ENST00000519623 ZNF606Q8WXB4 792 aa12.93□□□□□ -0.34
CSMD1-205ENST00000519623 SLC39A13Q96H72 371 aa12.93□□□□□ -0.34
CSMD1-205ENST00000519623 MED15Q96RN5 788 aa12.93□□□□□ -0.34
CSMD1-205ENST00000519623 SCNM1Q9BWG6 230 aa12.93□□□□□ -0.34
CSMD1-205ENST00000519623 TMEM121BQ9BXQ6 578 aaPredicted RBP12.93□□□□□ -0.34
CSMD1-205ENST00000519623 SLC4A5Q9BY07 1137 aa12.93□□□□□ -0.34
CSMD1-205ENST00000519623 PRSS16Q9NQE7 514 aa12.93□□□□□ -0.34
CSMD1-205ENST00000519623 CYTH4Q9UIA0 394 aa12.93□□□□□ -0.34
CSMD1-205ENST00000519623 CHD6Q8TD26 2715 aa12.93□□□□□ -0.34
CSMD1-205ENST00000519623 IGF2RP11717 2491 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms