RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-213ENST00000519553 IGFBP2P18065 325 aa6.94□□□□□ -1.3
PTPN12-213ENST00000519553 CST5P28325 142 aaPredicted RBP6.94□□□□□ -1.3
PTPN12-213ENST00000519553 PRKAA2P54646 552 aa6.94□□□□□ -1.3
PTPN12-213ENST00000519553 TLE3Q04726 772 aa6.94□□□□□ -1.3
PTPN12-213ENST00000519553 DMWDQ09019 674 aa6.94□□□□□ -1.3
PTPN12-213ENST00000519553 PRKG1Q13976 671 aa6.94□□□□□ -1.3
PTPN12-213ENST00000519553 DHX8Q14562 1220 aaKnown RBP6.94□□□□□ -1.3
PTPN12-213ENST00000519553 RFX6Q8HWS3 928 aa6.94□□□□□ -1.3
PTPN12-213ENST00000519553 CCDC117Q8IWD4 279 aaPredicted RBP6.94□□□□□ -1.3
PTPN12-213ENST00000519553 GALNT15Q8N3T1 639 aa6.94□□□□□ -1.3
PTPN12-213ENST00000519553 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.94□□□□□ -1.3
PTPN12-213ENST00000519553 CCT6BQ92526 530 aa6.94□□□□□ -1.3
PTPN12-213ENST00000519553 ZNF845Q96IR2 970 aaPredicted RBP6.94□□□□□ -1.3
PTPN12-213ENST00000519553 ELAC1Q9H777 363 aaKnown RBP6.94□□□□□ -1.3
PTPN12-213ENST00000519553 MLXIPLQ9NP71 852 aa6.94□□□□□ -1.3
PTPN12-213ENST00000519553 B3GNT3Q9Y2A9 372 aa6.94□□□□□ -1.3
PTPN12-213ENST00000519553 TUBB4AP04350 444 aa6.93□□□□□ -1.3
PTPN12-213ENST00000519553 SLC3A2P08195 630 aaKnown RBP6.93□□□□□ -1.3
PTPN12-213ENST00000519553 CYP3A4P08684 503 aa6.93□□□□□ -1.3
PTPN12-213ENST00000519553 CYP21A2P08686 494 aa6.93□□□□□ -1.3
PTPN12-213ENST00000519553 EPHB2P29323 1055 aa6.93□□□□□ -1.3
PTPN12-213ENST00000519553 MPGP29372 298 aa6.93□□□□□ -1.3
PTPN12-213ENST00000519553 VPS41P49754 854 aa6.93□□□□□ -1.3
PTPN12-213ENST00000519553 RBM6P78332 1123 aaKnown RBP6.93□□□□□ -1.3
PTPN12-213ENST00000519553 INO80DQ53TQ3 878 aaPredicted RBP6.93□□□□□ -1.3
PTPN12-213ENST00000519553 COLEC12Q5KU26 742 aa6.93□□□□□ -1.3
PTPN12-213ENST00000519553 MEX3CQ5U5Q3 659 aaKnown RBP6.93□□□□□ -1.3
PTPN12-213ENST00000519553 WDR93Q6P2C0 686 aa6.93□□□□□ -1.3
PTPN12-213ENST00000519553 GALNT16Q8N428 558 aa6.93□□□□□ -1.3
PTPN12-213ENST00000519553 MAP4K1Q92918 833 aa6.93□□□□□ -1.3
PTPN12-213ENST00000519553 PSMD1Q99460 953 aa6.93□□□□□ -1.3
PTPN12-213ENST00000519553 SH2D3AQ9BRG2 576 aa6.93□□□□□ -1.3
PTPN12-213ENST00000519553 ABHD16BQ9H3Z7 469 aa6.93□□□□□ -1.3
PTPN12-213ENST00000519553 LIN7CQ9NUP9 197 aaKnown RBP6.93□□□□□ -1.3
PTPN12-213ENST00000519553 PCDHGB3Q9Y5G1 929 aa6.93□□□□□ -1.3
PTPN12-213ENST00000519553 HEMK1Q9Y5R4 338 aaPredicted RBP6.93□□□□□ -1.3
PTPN12-213ENST00000519553 HMX3A6NHT5 357 aa6.92□□□□□ -1.3
PTPN12-213ENST00000519553 MBD3L5A6NJ08 208 aaPredicted RBP6.92□□□□□ -1.3
PTPN12-213ENST00000519553 EFCAB8A8MWE9 144 aa6.92□□□□□ -1.3
PTPN12-213ENST00000519553 TTC34A8MYJ7 566 aa6.92□□□□□ -1.3
PTPN12-213ENST00000519553 H0Y3Z8 333 aa6.92□□□□□ -1.3
PTPN12-213ENST00000519553 EIF3JO75822 258 aaKnown RBP6.92□□□□□ -1.3
PTPN12-213ENST00000519553 FAM155BO75949 473 aa6.92□□□□□ -1.3
PTPN12-213ENST00000519553 HEXIM1O94992 359 aaKnown RBP6.92□□□□□ -1.3
PTPN12-213ENST00000519553 CELA2AP08217 269 aa6.92□□□□□ -1.3
PTPN12-213ENST00000519553 CERS1P27544 350 aa6.92□□□□□ -1.3
PTPN12-213ENST00000519553 C21orf58P58505 322 aa6.92□□□□□ -1.3
PTPN12-213ENST00000519553 YPEL5P62699 121 aa6.92□□□□□ -1.3
PTPN12-213ENST00000519553 PFKFB3Q16875 520 aaPredicted RBP6.92□□□□□ -1.3
PTPN12-213ENST00000519553 LDHAL6AQ6ZMR3 332 aa6.92□□□□□ -1.3
PTPN12-213ENST00000519553 RRAGAQ7L523 313 aa6.92□□□□□ -1.3
PTPN12-213ENST00000519553 SUGP1Q8IWZ8 645 aaKnown RBP6.92□□□□□ -1.3
PTPN12-213ENST00000519553 SPATA5Q8NB90 893 aa6.92□□□□□ -1.3
PTPN12-213ENST00000519553 OSR1Q8TAX0 266 aaPredicted RBP6.92□□□□□ -1.3
PTPN12-213ENST00000519553 IGFBPL1Q8WX77 278 aa6.92□□□□□ -1.3
PTPN12-213ENST00000519553 CELF1Q92879 486 aaKnown RBP6.92□□□□□ -1.3
PTPN12-213ENST00000519553 GPR78Q96P69 363 aa6.92□□□□□ -1.3
PTPN12-213ENST00000519553 TRAPPC9Q96Q05 1148 aa6.92□□□□□ -1.3
PTPN12-213ENST00000519553 FCRL5Q96RD9 977 aa6.92□□□□□ -1.3
PTPN12-213ENST00000519553 SENP7Q9BQF6 1050 aa6.92□□□□□ -1.3
PTPN12-213ENST00000519553 PAGR1Q9BTK6 254 aa6.92□□□□□ -1.3
PTPN12-213ENST00000519553 TM2D2Q9BX73 214 aa6.92□□□□□ -1.3
PTPN12-213ENST00000519553 SEMA4CQ9C0C4 833 aa6.92□□□□□ -1.3
PTPN12-213ENST00000519553 ARL8BQ9NVJ2 186 aa6.92□□□□□ -1.3
PTPN12-213ENST00000519553 KLHL13Q9P2N7 655 aa6.92□□□□□ -1.3
PTPN12-213ENST00000519553 MAFFQ9ULX9 164 aa6.92□□□□□ -1.3
PTPN12-213ENST00000519553 SLC12A4Q9UP95 1085 aa6.92□□□□□ -1.3
PTPN12-213ENST00000519553 WDR17Q8IZU2 1322 aa6.92□□□□□ -1.3
PTPN12-213ENST00000519553 PPP6CO00743 305 aa6.91□□□□□ -1.3
PTPN12-213ENST00000519553 RNF8O76064 485 aa6.91□□□□□ -1.3
PTPN12-213ENST00000519553 RFPL3SP0C7P2 107 aa6.91□□□□□ -1.3
PTPN12-213ENST00000519553 SERPINA4P29622 427 aa6.91□□□□□ -1.3
PTPN12-213ENST00000519553 GRK5P34947 590 aa6.91□□□□□ -1.3
PTPN12-213ENST00000519553 SLC37A1P57057 533 aa6.91□□□□□ -1.3
PTPN12-213ENST00000519553 RNASELQ05823 741 aaKnown RBP6.91□□□□□ -1.3
PTPN12-213ENST00000519553 ZNF268Q14587 947 aaPredicted RBP6.91□□□□□ -1.3
PTPN12-213ENST00000519553 ZNF569Q5MCW4 686 aa6.91□□□□□ -1.3
PTPN12-213ENST00000519553 DPY19L2P1Q6NXN4 242 aa6.91□□□□□ -1.3
PTPN12-213ENST00000519553 SLC39A5Q6ZMH5 540 aa6.91□□□□□ -1.3
PTPN12-213ENST00000519553 SMC5Q8IY18 1101 aa6.91□□□□□ -1.3
PTPN12-213ENST00000519553 SRRM1Q8IYB3 904 aaKnown RBP6.91□□□□□ -1.3
PTPN12-213ENST00000519553 ADGRF3Q8IZF5 1079 aa6.91□□□□□ -1.3
PTPN12-213ENST00000519553 ANKRD42Q8N9B4 389 aa6.91□□□□□ -1.3
PTPN12-213ENST00000519553 SLC2A12Q8TD20 617 aa6.91□□□□□ -1.3
PTPN12-213ENST00000519553 CLEC4CQ8WTT0 213 aa6.91□□□□□ -1.3
PTPN12-213ENST00000519553 C3orf49Q96BT1 292 aa6.91□□□□□ -1.3
PTPN12-213ENST00000519553 TBC1D20Q96BZ9 403 aa6.91□□□□□ -1.3
PTPN12-213ENST00000519553 ISCA1Q9BUE6 129 aa6.91□□□□□ -1.3
PTPN12-213ENST00000519553 QTRT1Q9BXR0 403 aaKnown RBP6.91□□□□□ -1.3
PTPN12-213ENST00000519553 BRD8Q9H0E9 1235 aa6.91□□□□□ -1.3
PTPN12-213ENST00000519553 CYP3A7-CYP3A51PA0A087WV96 503 aa6.9□□□□□ -1.3
PTPN12-213ENST00000519553 FAM90A20PA6NIJ5 464 aa6.9□□□□□ -1.3
PTPN12-213ENST00000519553 C3orf70A6NLC5 250 aaPredicted RBP6.9□□□□□ -1.3
PTPN12-213ENST00000519553 ALDOAP04075 364 aaKnown RBP6.9□□□□□ -1.3
PTPN12-213ENST00000519553 DHRS4L1P0CG22 281 aa6.9□□□□□ -1.3
PTPN12-213ENST00000519553 CYP3A7P24462 503 aa6.9□□□□□ -1.3
PTPN12-213ENST00000519553 TACR3P29371 465 aa6.9□□□□□ -1.3
PTPN12-213ENST00000519553 SOX2P48431 317 aa6.9□□□□□ -1.3
PTPN12-213ENST00000519553 CFHR1Q03591 330 aa6.9□□□□□ -1.3
PTPN12-213ENST00000519553 SUPT20HL1Q3ZLR7 823 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms