RNA–Protein interactions for RNA: ENST00000518882.2

PCDHGA11-202, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDHGA11, Length 2,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-202ENST00000518882 S100A14Q9HCY8 104 aa17.06■□□□□ 0.32
PCDHGA11-202ENST00000518882 ITGA11Q9UKX5 1188 aa17.06■□□□□ 0.32
PCDHGA11-202ENST00000518882 KIAA1257Q9ULG3 409 aa17.06■□□□□ 0.32
PCDHGA11-202ENST00000518882 PDE5AO76074 875 aa17.05■□□□□ 0.32
PCDHGA11-202ENST00000518882 CNTFP26441 200 aa17.05■□□□□ 0.32
PCDHGA11-202ENST00000518882 RBP5P82980 135 aa17.05■□□□□ 0.32
PCDHGA11-202ENST00000518882 ROR2Q01974 943 aaKnown RBP17.05■□□□□ 0.32
PCDHGA11-202ENST00000518882 TNFAIP2Q03169 654 aa17.05■□□□□ 0.32
PCDHGA11-202ENST00000518882 STILQ15468 1287 aa17.05■□□□□ 0.32
PCDHGA11-202ENST00000518882 LRRC36Q1X8D7 754 aa17.05■□□□□ 0.32
PCDHGA11-202ENST00000518882 EFHC1Q5JVL4 640 aa17.05■□□□□ 0.32
PCDHGA11-202ENST00000518882 NOL9Q5SY16 702 aaKnown RBP17.05■□□□□ 0.32
PCDHGA11-202ENST00000518882 CYS1Q717R9 158 aa17.05■□□□□ 0.32
PCDHGA11-202ENST00000518882 PYROXD2Q8N2H3 581 aa17.05■□□□□ 0.32
PCDHGA11-202ENST00000518882 CCDC185Q8N715 623 aa17.05■□□□□ 0.32
PCDHGA11-202ENST00000518882 TRPM4Q8TD43 1214 aa17.05■□□□□ 0.32
PCDHGA11-202ENST00000518882 ARNTL2Q8WYA1 636 aa17.05■□□□□ 0.32
PCDHGA11-202ENST00000518882 PGLYRP2Q96PD5 576 aa17.05■□□□□ 0.32
PCDHGA11-202ENST00000518882 LGMNQ99538 433 aa17.05■□□□□ 0.32
PCDHGA11-202ENST00000518882 C11orf84Q9BUA3 381 aaPredicted RBP17.05■□□□□ 0.32
PCDHGA11-202ENST00000518882 NFKBIZQ9BYH8 718 aa17.05■□□□□ 0.32
PCDHGA11-202ENST00000518882 EBF3Q9H4W6 596 aa17.05■□□□□ 0.32
PCDHGA11-202ENST00000518882 AP4E1Q9UPM8 1137 aa17.05■□□□□ 0.32
PCDHGA11-202ENST00000518882 APOBEC2Q9Y235 224 aaKnown RBP17.05■□□□□ 0.32
PCDHGA11-202ENST00000518882 E2F8A0AVK6 867 aa17.05■□□□□ 0.32
PCDHGA11-202ENST00000518882 A6NJR5 290 aa17.05■□□□□ 0.32
PCDHGA11-202ENST00000518882 PPEF2O14830 753 aa17.05■□□□□ 0.32
PCDHGA11-202ENST00000518882 HCRTO43612 131 aa17.05■□□□□ 0.32
PCDHGA11-202ENST00000518882 HBP1O60381 514 aa17.05■□□□□ 0.32
PCDHGA11-202ENST00000518882 RNASEH1O60930 286 aaKnown RBP17.05■□□□□ 0.32
PCDHGA11-202ENST00000518882 GLRA3O75311 464 aa17.05■□□□□ 0.32
PCDHGA11-202ENST00000518882 FKBP6O75344 327 aa17.05■□□□□ 0.32
PCDHGA11-202ENST00000518882 PHKA2P46019 1235 aa17.05■□□□□ 0.32
PCDHGA11-202ENST00000518882 IDH3AP50213 366 aa17.05■□□□□ 0.32
PCDHGA11-202ENST00000518882 EPHB1P54762 984 aa17.05■□□□□ 0.32
PCDHGA11-202ENST00000518882 POLE2P56282 527 aa17.05■□□□□ 0.32
PCDHGA11-202ENST00000518882 SESN2P58004 480 aaPredicted RBP17.05■□□□□ 0.32
PCDHGA11-202ENST00000518882 PEX6Q13608 980 aa17.05■□□□□ 0.32
PCDHGA11-202ENST00000518882 CCNIQ14094 377 aa17.05■□□□□ 0.32
PCDHGA11-202ENST00000518882 FAM187BQ17R55 369 aa17.05■□□□□ 0.32
PCDHGA11-202ENST00000518882 DLK2Q6UY11 383 aa17.05■□□□□ 0.32
PCDHGA11-202ENST00000518882 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.05■□□□□ 0.32
PCDHGA11-202ENST00000518882 SIKE1Q9BRV8 207 aa17.05■□□□□ 0.32
PCDHGA11-202ENST00000518882 PDP2Q9P2J9 529 aa17.05■□□□□ 0.32
PCDHGA11-202ENST00000518882 ZNF487B1APH4 448 aa17.04■□□□□ 0.32
PCDHGA11-202ENST00000518882 ZNF195O14628 629 aa17.04■□□□□ 0.32
PCDHGA11-202ENST00000518882 PROCP04070 461 aa17.04■□□□□ 0.32
PCDHGA11-202ENST00000518882 GOT1P17174 413 aa17.04■□□□□ 0.32
PCDHGA11-202ENST00000518882 MGAT1P26572 445 aa17.04■□□□□ 0.32
PCDHGA11-202ENST00000518882 COPAP53621 1224 aa17.04■□□□□ 0.32
PCDHGA11-202ENST00000518882 DBN1Q16643 649 aa17.04■□□□□ 0.32
PCDHGA11-202ENST00000518882 SESTD1Q86VW0 696 aa17.04■□□□□ 0.32
PCDHGA11-202ENST00000518882 MFN1Q8IWA4 741 aa17.04■□□□□ 0.32
PCDHGA11-202ENST00000518882 ACMSDQ8TDX5 336 aa17.04■□□□□ 0.32
PCDHGA11-202ENST00000518882 HTR3CQ8WXA8 447 aa17.04■□□□□ 0.32
PCDHGA11-202ENST00000518882 CEP41Q9BYV8 373 aa17.04■□□□□ 0.32
PCDHGA11-202ENST00000518882 GCOM2Q9BZD3 368 aaPredicted RBP17.04■□□□□ 0.32
PCDHGA11-202ENST00000518882 SMARCAD1Q9H4L7 1026 aa17.04■□□□□ 0.32
PCDHGA11-202ENST00000518882 ZNF358Q9NW07 568 aa17.04■□□□□ 0.32
PCDHGA11-202ENST00000518882 TMEM216Q9P0N5 145 aa17.04■□□□□ 0.32
PCDHGA11-202ENST00000518882 CCNT2O60583 730 aaKnown RBP17.04■□□□□ 0.32
PCDHGA11-202ENST00000518882 VTNP04004 478 aa17.04■□□□□ 0.32
PCDHGA11-202ENST00000518882 SERPINE1P05121 402 aa17.04■□□□□ 0.32
PCDHGA11-202ENST00000518882 ITGA2BP08514 1039 aa17.04■□□□□ 0.32
PCDHGA11-202ENST00000518882 NR2C2P49116 596 aa17.04■□□□□ 0.32
PCDHGA11-202ENST00000518882 SOWAHAQ2M3V2 549 aa17.04■□□□□ 0.32
PCDHGA11-202ENST00000518882 DHDDSQ86SQ9 333 aa17.04■□□□□ 0.32
PCDHGA11-202ENST00000518882 APOBEC3FQ8IUX4 373 aaKnown RBP17.04■□□□□ 0.32
PCDHGA11-202ENST00000518882 CCDC124Q96CT7 223 aaKnown RBP17.04■□□□□ 0.32
PCDHGA11-202ENST00000518882 STN1Q9H668 368 aaKnown RBP17.04■□□□□ 0.32
PCDHGA11-202ENST00000518882 CYP4F11Q9HBI6 524 aa17.04■□□□□ 0.32
PCDHGA11-202ENST00000518882 GGA3Q9NZ52 723 aa17.04■□□□□ 0.32
PCDHGA11-202ENST00000518882 ADAMTS6Q9UKP5 1117 aa17.04■□□□□ 0.32
PCDHGA11-202ENST00000518882 USP3Q9Y6I4 520 aa17.04■□□□□ 0.32
PCDHGA11-202ENST00000518882 DGKIO75912 1065 aa17.03■□□□□ 0.32
PCDHGA11-202ENST00000518882 KLHL2O95198 593 aa17.03■□□□□ 0.32
PCDHGA11-202ENST00000518882 CALRP27797 417 aaKnown RBP17.03■□□□□ 0.32
PCDHGA11-202ENST00000518882 VGLL4Q14135 290 aa17.03■□□□□ 0.32
PCDHGA11-202ENST00000518882 SFT2D3Q587I9 215 aa17.03■□□□□ 0.32
PCDHGA11-202ENST00000518882 DALRD3Q5D0E6 543 aaKnown RBP17.03■□□□□ 0.32
PCDHGA11-202ENST00000518882 BSPRYQ5W0U4 402 aa17.03■□□□□ 0.32
PCDHGA11-202ENST00000518882 LPCAT4Q643R3 524 aa17.03■□□□□ 0.32
PCDHGA11-202ENST00000518882 PGM2L1Q6PCE3 622 aa17.03■□□□□ 0.32
PCDHGA11-202ENST00000518882 AAGABQ6PD74 315 aa17.03■□□□□ 0.32
PCDHGA11-202ENST00000518882 CES3Q6UWW8 571 aa17.03■□□□□ 0.32
PCDHGA11-202ENST00000518882 ADGRG6Q86SQ4 1221 aa17.03■□□□□ 0.32
PCDHGA11-202ENST00000518882 PDSS2Q86YH6 399 aa17.03■□□□□ 0.32
PCDHGA11-202ENST00000518882 EFCAB3Q8N7B9 438 aa17.03■□□□□ 0.32
PCDHGA11-202ENST00000518882 OR6Y1Q8NGX8 325 aa17.03■□□□□ 0.32
PCDHGA11-202ENST00000518882 CENPIQ92674 756 aaPredicted RBP17.03■□□□□ 0.32
PCDHGA11-202ENST00000518882 KIF12Q96FN5 646 aa17.03■□□□□ 0.32
PCDHGA11-202ENST00000518882 OLFM3Q96PB7 478 aa17.03■□□□□ 0.32
PCDHGA11-202ENST00000518882 OXCT2Q9BYC2 517 aaPredicted RBP17.03■□□□□ 0.32
PCDHGA11-202ENST00000518882 PDGFCQ9NRA1 345 aa17.03■□□□□ 0.32
PCDHGA11-202ENST00000518882 MORF4L1Q9UBU8 362 aa17.03■□□□□ 0.32
PCDHGA11-202ENST00000518882 SNX9Q9Y5X1 595 aa17.03■□□□□ 0.32
PCDHGA11-202ENST00000518882 BRCA1P38398 1863 aaKnown RBP17.03■□□□□ 0.32
PCDHGA11-202ENST00000518882 A0A0A0MRY4 1105 aa17.03■□□□□ 0.32
PCDHGA11-202ENST00000518882 SNUPNO95149 360 aaKnown RBP17.03■□□□□ 0.32
PCDHGA11-202ENST00000518882 STAU1O95793 577 aaKnown RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms