RNA–Protein interactions for RNA: ENST00000518638.1

CCDC6-203, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-203ENST00000518638 SYT3Q9BQG1 590 aa6.72□□□□□ -1.33
CCDC6-203ENST00000518638 SCNM1Q9BWG6 230 aa6.72□□□□□ -1.33
CCDC6-203ENST00000518638 SCAND2PQ9GZW5 306 aaPredicted RBP6.72□□□□□ -1.33
CCDC6-203ENST00000518638 SLC32A1Q9H598 525 aa6.72□□□□□ -1.33
CCDC6-203ENST00000518638 ZNF334Q9HCZ1 680 aaPredicted RBP6.72□□□□□ -1.33
CCDC6-203ENST00000518638 SAMD15Q9P1V8 674 aa6.72□□□□□ -1.33
CCDC6-203ENST00000518638 SUCLA2Q9P2R7 463 aaPredicted RBP6.72□□□□□ -1.33
CCDC6-203ENST00000518638 WASF3Q9UPY6 502 aa6.72□□□□□ -1.33
CCDC6-203ENST00000518638 ATP23Q9Y6H3 246 aa6.72□□□□□ -1.33
CCDC6-203ENST00000518638 PDCD11Q14690 1871 aaKnown RBP6.72□□□□□ -1.33
CCDC6-203ENST00000518638 ASPMQ8IZT6 3477 aa6.72□□□□□ -1.33
CCDC6-203ENST00000518638 DOCK6Q96HP0 2047 aa6.71□□□□□ -1.33
CCDC6-203ENST00000518638 F5P12259 2224 aa6.71□□□□□ -1.34
CCDC6-203ENST00000518638 SMCO2A6NFE2 343 aa6.71□□□□□ -1.34
CCDC6-203ENST00000518638 SHISA7A6NL88 538 aa6.71□□□□□ -1.34
CCDC6-203ENST00000518638 ACOT7O00154 380 aa6.71□□□□□ -1.34
CCDC6-203ENST00000518638 GAS7O60861 476 aa6.71□□□□□ -1.34
CCDC6-203ENST00000518638 ATG13O75143 517 aa6.71□□□□□ -1.34
CCDC6-203ENST00000518638 MAFO75444 373 aaPredicted RBP6.71□□□□□ -1.34
CCDC6-203ENST00000518638 RHOBTB1O94844 696 aa6.71□□□□□ -1.34
CCDC6-203ENST00000518638 CYP21A2P08686 494 aa6.71□□□□□ -1.34
CCDC6-203ENST00000518638 C6P13671 934 aa6.71□□□□□ -1.34
CCDC6-203ENST00000518638 PTPN2P17706 415 aa6.71□□□□□ -1.34
CCDC6-203ENST00000518638 PTPN1P18031 435 aaKnown RBP6.71□□□□□ -1.34
CCDC6-203ENST00000518638 CCNE1P24864 410 aa6.71□□□□□ -1.34
CCDC6-203ENST00000518638 MCM5P33992 734 aa6.71□□□□□ -1.34
CCDC6-203ENST00000518638 FLT3P36888 993 aa6.71□□□□□ -1.34
CCDC6-203ENST00000518638 GDF5P43026 501 aa6.71□□□□□ -1.34
CCDC6-203ENST00000518638 SCNN1GP51170 649 aa6.71□□□□□ -1.34
CCDC6-203ENST00000518638 MECP2P51608 486 aaKnown RBP6.71□□□□□ -1.34
CCDC6-203ENST00000518638 ADAM9Q13443 819 aa6.71□□□□□ -1.34
CCDC6-203ENST00000518638 C21orf62-AS1Q17RA5 79 aa6.71□□□□□ -1.34
CCDC6-203ENST00000518638 C20orf194Q5TEA3 1177 aa6.71□□□□□ -1.34
CCDC6-203ENST00000518638 BTBD8Q5XKL5 378 aa6.71□□□□□ -1.34
CCDC6-203ENST00000518638 HAUS6Q7Z4H7 955 aa6.71□□□□□ -1.34
CCDC6-203ENST00000518638 RALGPS2Q86X27 583 aaPredicted RBP6.71□□□□□ -1.34
CCDC6-203ENST00000518638 CEP57Q86XR8 500 aa6.71□□□□□ -1.34
CCDC6-203ENST00000518638 YAF2Q8IY57 180 aa6.71□□□□□ -1.34
CCDC6-203ENST00000518638 ELMOD1Q8N336 334 aa6.71□□□□□ -1.34
CCDC6-203ENST00000518638 CAMKK1Q8N5S9 505 aa6.71□□□□□ -1.34
CCDC6-203ENST00000518638 TCP11Q8WWU5 503 aa6.71□□□□□ -1.34
CCDC6-203ENST00000518638 ING5Q8WYH8 240 aa6.71□□□□□ -1.34
CCDC6-203ENST00000518638 MCRS1Q96EZ8 462 aa6.71□□□□□ -1.34
CCDC6-203ENST00000518638 PGBD1Q96JS3 809 aa6.71□□□□□ -1.34
CCDC6-203ENST00000518638 TMEM209Q96SK2 561 aa6.71□□□□□ -1.34
CCDC6-203ENST00000518638 GAD1Q99259 594 aa6.71□□□□□ -1.34
CCDC6-203ENST00000518638 CLSTN3Q9BQT9 956 aa6.71□□□□□ -1.34
CCDC6-203ENST00000518638 TEKT3Q9BXF9 490 aa6.71□□□□□ -1.34
CCDC6-203ENST00000518638 C1QTNF3Q9BXJ4 246 aa6.71□□□□□ -1.34
CCDC6-203ENST00000518638 GPR88Q9GZN0 384 aa6.71□□□□□ -1.34
CCDC6-203ENST00000518638 IFT122Q9HBG6 1241 aa6.71□□□□□ -1.34
CCDC6-203ENST00000518638 TMEM9BQ9NQ34 198 aa6.71□□□□□ -1.34
CCDC6-203ENST00000518638 BARHL2Q9NY43 387 aa6.71□□□□□ -1.34
CCDC6-203ENST00000518638 DNMT3BQ9UBC3 853 aaKnown RBP6.71□□□□□ -1.34
CCDC6-203ENST00000518638 IPPQ9Y573 584 aa6.71□□□□□ -1.34
CCDC6-203ENST00000518638 WDR87Q6ZQQ6 2873 aa6.71□□□□□ -1.34
CCDC6-203ENST00000518638 A0A1B0GTL3 188 aa6.7□□□□□ -1.34
CCDC6-203ENST00000518638 SLC12A8A0AV02 714 aa6.7□□□□□ -1.34
CCDC6-203ENST00000518638 ESYT2A0FGR8 921 aa6.7□□□□□ -1.34
CCDC6-203ENST00000518638 SH3D21A4FU49 640 aa6.7□□□□□ -1.34
CCDC6-203ENST00000518638 FAM90A27PA6NNH2 459 aa6.7□□□□□ -1.34
CCDC6-203ENST00000518638 RPL17P18621 184 aaKnown RBP6.7□□□□□ -1.34
CCDC6-203ENST00000518638 GNA11P29992 359 aa6.7□□□□□ -1.34
CCDC6-203ENST00000518638 GDI1P31150 447 aa6.7□□□□□ -1.34
CCDC6-203ENST00000518638 ELF1P32519 619 aa6.7□□□□□ -1.34
CCDC6-203ENST00000518638 CIITAP33076 1130 aa6.7□□□□□ -1.34
CCDC6-203ENST00000518638 THBS2P35442 1172 aa6.7□□□□□ -1.34
CCDC6-203ENST00000518638 KPNA1P52294 538 aaPredicted RBP6.7□□□□□ -1.34
CCDC6-203ENST00000518638 TBX4P57082 545 aa6.7□□□□□ -1.34
CCDC6-203ENST00000518638 ANTXR2P58335 489 aa6.7□□□□□ -1.34
CCDC6-203ENST00000518638 SRSF5Q13243 272 aaKnown RBP6.7□□□□□ -1.34
CCDC6-203ENST00000518638 DRP2Q13474 957 aa6.7□□□□□ -1.34
CCDC6-203ENST00000518638 HDAC1Q13547 482 aaPredicted RBP6.7□□□□□ -1.34
CCDC6-203ENST00000518638 PTPAQ15257 358 aa6.7□□□□□ -1.34
CCDC6-203ENST00000518638 PRR16Q569H4 304 aa6.7□□□□□ -1.34
CCDC6-203ENST00000518638 CYP4A22Q5TCH4 519 aa6.7□□□□□ -1.34
CCDC6-203ENST00000518638 FAM171A1Q5VUB5 890 aa6.7□□□□□ -1.34
CCDC6-203ENST00000518638 TANGO2Q6ICL3 276 aa6.7□□□□□ -1.34
CCDC6-203ENST00000518638 UBE2R2Q712K3 238 aaPredicted RBP6.7□□□□□ -1.34
CCDC6-203ENST00000518638 PDZD4Q76G19 769 aaPredicted RBP6.7□□□□□ -1.34
CCDC6-203ENST00000518638 MFSD6LQ8IWD5 586 aa6.7□□□□□ -1.34
CCDC6-203ENST00000518638 MB21D2Q8IYB1 491 aaPredicted RBP6.7□□□□□ -1.34
CCDC6-203ENST00000518638 ADGRG2Q8IZP9 1017 aa6.7□□□□□ -1.34
CCDC6-203ENST00000518638 FANCBQ8NB91 859 aa6.7□□□□□ -1.34
CCDC6-203ENST00000518638 LNX1Q8TBB1 728 aaPredicted RBP6.7□□□□□ -1.34
CCDC6-203ENST00000518638 BICD2Q8TD16 824 aa6.7□□□□□ -1.34
CCDC6-203ENST00000518638 CRYGNQ8WXF5 182 aa6.7□□□□□ -1.34
CCDC6-203ENST00000518638 SMARCD2Q92925 531 aa6.7□□□□□ -1.34
CCDC6-203ENST00000518638 EXOC4Q96A65 974 aa6.7□□□□□ -1.34
CCDC6-203ENST00000518638 MFSD3Q96ES6 412 aa6.7□□□□□ -1.34
CCDC6-203ENST00000518638 KRTAP3-1Q9BYR8 98 aa6.7□□□□□ -1.34
CCDC6-203ENST00000518638 PLA2G2FQ9BZM2 168 aa6.7□□□□□ -1.34
CCDC6-203ENST00000518638 CSRNP2Q9H175 543 aa6.7□□□□□ -1.34
CCDC6-203ENST00000518638 SLITRK6Q9H5Y7 841 aa6.7□□□□□ -1.34
CCDC6-203ENST00000518638 TRPV4Q9HBA0 871 aa6.7□□□□□ -1.34
CCDC6-203ENST00000518638 RIC8BQ9NVN3 520 aa6.7□□□□□ -1.34
CCDC6-203ENST00000518638 NOTCH4Q99466 2003 aa6.69□□□□□ -1.34
CCDC6-203ENST00000518638 hCG_1642624A0A1W2PR95 340 aa6.69□□□□□ -1.34
CCDC6-203ENST00000518638 ARHGEF37A1IGU5 675 aa6.69□□□□□ -1.34
CCDC6-203ENST00000518638 C4orf47A7E2U8 309 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms