RNA–Protein interactions for RNA: ENST00000516989.1

SCARNA6.1-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 238 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6.1-201ENST00000516989 CDH23Q9H251 3354 aa6.1□□□□□ -1.43
SCARNA6.1-201ENST00000516989 FAM170AA1A519 330 aa6.09□□□□□ -1.43
SCARNA6.1-201ENST00000516989 LRRC53A6NM62 1247 aa6.09□□□□□ -1.43
SCARNA6.1-201ENST00000516989 C2CD4DB7Z1M9 353 aa6.09□□□□□ -1.43
SCARNA6.1-201ENST00000516989 TULP2O00295 520 aa6.09□□□□□ -1.43
SCARNA6.1-201ENST00000516989 XPO1O14980 1071 aaKnown RBP6.09□□□□□ -1.43
SCARNA6.1-201ENST00000516989 PAPLNO95428 1278 aa6.09□□□□□ -1.43
SCARNA6.1-201ENST00000516989 TPM1P09493 284 aa6.09□□□□□ -1.43
SCARNA6.1-201ENST00000516989 LAMP2P13473 410 aa6.09□□□□□ -1.43
SCARNA6.1-201ENST00000516989 NME1P15531 152 aaKnown RBP6.09□□□□□ -1.43
SCARNA6.1-201ENST00000516989 FERP16591 822 aa6.09□□□□□ -1.43
SCARNA6.1-201ENST00000516989 TNFAIP3P21580 790 aa6.09□□□□□ -1.43
SCARNA6.1-201ENST00000516989 CDC25CP30307 473 aa6.09□□□□□ -1.43
SCARNA6.1-201ENST00000516989 CCR2P41597 374 aa6.09□□□□□ -1.43
SCARNA6.1-201ENST00000516989 GPD2P43304 727 aa6.09□□□□□ -1.43
SCARNA6.1-201ENST00000516989 PDE6CP51160 858 aa6.09□□□□□ -1.43
SCARNA6.1-201ENST00000516989 TKTL1P51854 596 aa6.09□□□□□ -1.43
SCARNA6.1-201ENST00000516989 SLC5A3P53794 718 aa6.09□□□□□ -1.43
SCARNA6.1-201ENST00000516989 EPHA5P54756 1037 aa6.09□□□□□ -1.43
SCARNA6.1-201ENST00000516989 JAM2P57087 298 aa6.09□□□□□ -1.43
SCARNA6.1-201ENST00000516989 CYP4F8P98187 520 aa6.09□□□□□ -1.43
SCARNA6.1-201ENST00000516989 BST2Q10589 180 aaKnown RBP6.09□□□□□ -1.43
SCARNA6.1-201ENST00000516989 SUZ12Q15022 739 aaKnown RBP6.09□□□□□ -1.43
SCARNA6.1-201ENST00000516989 SLC5A9Q2M3M2 681 aa6.09□□□□□ -1.43
SCARNA6.1-201ENST00000516989 ARHGAP15Q53QZ3 475 aa6.09□□□□□ -1.43
SCARNA6.1-201ENST00000516989 PRSS36Q5K4E3 855 aa6.09□□□□□ -1.43
SCARNA6.1-201ENST00000516989 GPR158Q5T848 1215 aa6.09□□□□□ -1.43
SCARNA6.1-201ENST00000516989 SFMBT2Q5VUG0 894 aa6.09□□□□□ -1.43
SCARNA6.1-201ENST00000516989 SPECC1LQ69YQ0 1117 aa6.09□□□□□ -1.43
SCARNA6.1-201ENST00000516989 TXNDC8Q6A555 127 aa6.09□□□□□ -1.43
SCARNA6.1-201ENST00000516989 MRM1Q6IN84 353 aaKnown RBP6.09□□□□□ -1.43
SCARNA6.1-201ENST00000516989 SLCO4C1Q6ZQN7 724 aa6.09□□□□□ -1.43
SCARNA6.1-201ENST00000516989 GAREM2Q75VX8 874 aa6.09□□□□□ -1.43
SCARNA6.1-201ENST00000516989 NLRC3Q7RTR2 1065 aa6.09□□□□□ -1.43
SCARNA6.1-201ENST00000516989 KIAA0907Q7Z7F0 614 aaPredicted RBP6.09□□□□□ -1.43
SCARNA6.1-201ENST00000516989 TMC8Q8IU68 726 aa6.09□□□□□ -1.43
SCARNA6.1-201ENST00000516989 PASD1Q8IV76 773 aa6.09□□□□□ -1.43
SCARNA6.1-201ENST00000516989 DRC7Q8IY82 874 aa6.09□□□□□ -1.43
SCARNA6.1-201ENST00000516989 SIX6OS1Q8N1H7 587 aa6.09□□□□□ -1.43
SCARNA6.1-201ENST00000516989 MAB21L3Q8N8X9 362 aa6.09□□□□□ -1.43
SCARNA6.1-201ENST00000516989 TDRD5Q8NAT2 981 aaKnown RBP6.09□□□□□ -1.43
SCARNA6.1-201ENST00000516989 ZNF397Q8NF99 534 aaPredicted RBP6.09□□□□□ -1.43
SCARNA6.1-201ENST00000516989 SHKBP1Q8TBC3 707 aa6.09□□□□□ -1.43
SCARNA6.1-201ENST00000516989 SLC35F5Q8WV83 523 aa6.09□□□□□ -1.43
SCARNA6.1-201ENST00000516989 MRPS31Q92665 395 aaKnown RBP6.09□□□□□ -1.43
SCARNA6.1-201ENST00000516989 FGF13Q92913 245 aa6.09□□□□□ -1.43
SCARNA6.1-201ENST00000516989 MYRFLQ96LU7 910 aa6.09□□□□□ -1.43
SCARNA6.1-201ENST00000516989 CEP295NLQ96MC4 621 aa6.09□□□□□ -1.43
SCARNA6.1-201ENST00000516989 ZSWIM3Q96MP5 696 aa6.09□□□□□ -1.43
SCARNA6.1-201ENST00000516989 MYADMQ96S97 322 aa6.09□□□□□ -1.43
SCARNA6.1-201ENST00000516989 TRPC7Q9HCX4 862 aa6.09□□□□□ -1.43
SCARNA6.1-201ENST00000516989 ZNF334Q9HCZ1 680 aaPredicted RBP6.09□□□□□ -1.43
SCARNA6.1-201ENST00000516989 SEPT11Q9NVA2 429 aaKnown RBP6.09□□□□□ -1.43
SCARNA6.1-201ENST00000516989 COMMD8Q9NX08 183 aa6.09□□□□□ -1.43
SCARNA6.1-201ENST00000516989 ZMYM5Q9UJ78 669 aa6.09□□□□□ -1.43
SCARNA6.1-201ENST00000516989 CDH7Q9ULB5 785 aa6.09□□□□□ -1.43
SCARNA6.1-201ENST00000516989 PRKAB1Q9Y478 270 aa6.09□□□□□ -1.43
SCARNA6.1-201ENST00000516989 CEP83Q9Y592 693 aa6.09□□□□□ -1.43
SCARNA6.1-201ENST00000516989 MTCL1Q9Y4B5 1905 aaKnown RBP6.09□□□□□ -1.44
SCARNA6.1-201ENST00000516989 PLXNA3P51805 1871 aa6.09□□□□□ -1.44
SCARNA6.1-201ENST00000516989 CHD7Q9P2D1 2997 aa6.09□□□□□ -1.44
SCARNA6.1-201ENST00000516989 ATG2AQ2TAZ0 1938 aa6.08□□□□□ -1.44
SCARNA6.1-201ENST00000516989 ZNF840PA6NDX5 716 aa6.08□□□□□ -1.44
SCARNA6.1-201ENST00000516989 UPK3BL1B0FP48 263 aa6.08□□□□□ -1.44
SCARNA6.1-201ENST00000516989 CHURC1-FNTBB4DL54 471 aa6.08□□□□□ -1.44
SCARNA6.1-201ENST00000516989 HHLA1C9JL84 531 aa6.08□□□□□ -1.44
SCARNA6.1-201ENST00000516989 UPK3BL2E5RIL1 263 aa6.08□□□□□ -1.44
SCARNA6.1-201ENST00000516989 M0R082 166 aa6.08□□□□□ -1.44
SCARNA6.1-201ENST00000516989 AP5Z1O43299 807 aa6.08□□□□□ -1.44
SCARNA6.1-201ENST00000516989 DNAJA2O60884 412 aa6.08□□□□□ -1.44
SCARNA6.1-201ENST00000516989 MOSPD3O75425 235 aa6.08□□□□□ -1.44
SCARNA6.1-201ENST00000516989 MMEP08473 750 aa6.08□□□□□ -1.44
SCARNA6.1-201ENST00000516989 SETSIPP0DME0 302 aa6.08□□□□□ -1.44
SCARNA6.1-201ENST00000516989 EPXP11678 715 aa6.08□□□□□ -1.44
SCARNA6.1-201ENST00000516989 SKILP12757 684 aa6.08□□□□□ -1.44
SCARNA6.1-201ENST00000516989 CEBPBP17676 345 aa6.08□□□□□ -1.44
SCARNA6.1-201ENST00000516989 HDCP19113 662 aa6.08□□□□□ -1.44
SCARNA6.1-201ENST00000516989 CASP14P31944 242 aa6.08□□□□□ -1.44
SCARNA6.1-201ENST00000516989 AVPR1AP37288 418 aa6.08□□□□□ -1.44
SCARNA6.1-201ENST00000516989 PBX1P40424 430 aa6.08□□□□□ -1.44
SCARNA6.1-201ENST00000516989 PPP3CCP48454 512 aa6.08□□□□□ -1.44
SCARNA6.1-201ENST00000516989 KIF11P52732 1056 aa6.08□□□□□ -1.44
SCARNA6.1-201ENST00000516989 SNX16P57768 344 aa6.08□□□□□ -1.44
SCARNA6.1-201ENST00000516989 CDR2Q01850 454 aa6.08□□□□□ -1.44
SCARNA6.1-201ENST00000516989 ADIGQ0VDE8 80 aa6.08□□□□□ -1.44
SCARNA6.1-201ENST00000516989 ASIC2Q16515 512 aa6.08□□□□□ -1.44
SCARNA6.1-201ENST00000516989 FIGNQ5HY92 759 aa6.08□□□□□ -1.44
SCARNA6.1-201ENST00000516989 TMEM201Q5SNT2 666 aa6.08□□□□□ -1.44
SCARNA6.1-201ENST00000516989 STXBP5Q5T5C0 1151 aa6.08□□□□□ -1.44
SCARNA6.1-201ENST00000516989 CDCP2Q5VXM1 449 aa6.08□□□□□ -1.44
SCARNA6.1-201ENST00000516989 BTBD8Q5XKL5 378 aa6.08□□□□□ -1.44
SCARNA6.1-201ENST00000516989 PMF1Q6P1K2 205 aa6.08□□□□□ -1.44
SCARNA6.1-201ENST00000516989 VHLLQ6RSH7 139 aa6.08□□□□□ -1.44
SCARNA6.1-201ENST00000516989 SARM1Q6SZW1 724 aa6.08□□□□□ -1.44
SCARNA6.1-201ENST00000516989 C8orf86Q6ZUL3 223 aa6.08□□□□□ -1.44
SCARNA6.1-201ENST00000516989 GPRIN1Q7Z2K8 1008 aa6.08□□□□□ -1.44
SCARNA6.1-201ENST00000516989 TMC6Q7Z403 805 aa6.08□□□□□ -1.44
SCARNA6.1-201ENST00000516989 MON1AQ86VX9 555 aa6.08□□□□□ -1.44
SCARNA6.1-201ENST00000516989 FMNL3Q8IVF7 1028 aa6.08□□□□□ -1.44
SCARNA6.1-201ENST00000516989 VSTM4Q8IW00 320 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms