RNA–Protein interactions for RNA: ENST00000515620.5

CLDND1-231, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 663 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-231ENST00000515620 CACTIN-AS1Q8N1I8 211 aa10.99□□□□□ -0.65
CLDND1-231ENST00000515620 C12orf29Q8N999 325 aa10.99□□□□□ -0.65
CLDND1-231ENST00000515620 ZNF516Q92618 1163 aa10.99□□□□□ -0.65
CLDND1-231ENST00000515620 HPS3Q969F9 1004 aa10.99□□□□□ -0.65
CLDND1-231ENST00000515620 ZNF578Q96N58 590 aaPredicted RBP10.99□□□□□ -0.65
CLDND1-231ENST00000515620 DCLK3Q9C098 648 aa10.99□□□□□ -0.65
CLDND1-231ENST00000515620 EBF2Q9HAK2 575 aa10.99□□□□□ -0.65
CLDND1-231ENST00000515620 SERGEFQ9UGK8 458 aa10.99□□□□□ -0.65
CLDND1-231ENST00000515620 PLA2G4CQ9UP65 541 aa10.99□□□□□ -0.65
CLDND1-231ENST00000515620 NCKAP1Q9Y2A7 1128 aa10.99□□□□□ -0.65
CLDND1-231ENST00000515620 PCDHA5Q9Y5H7 936 aa10.99□□□□□ -0.65
CLDND1-231ENST00000515620 PIEZO2Q9H5I5 2752 aa10.98□□□□□ -0.65
CLDND1-231ENST00000515620 WNT9AO14904 365 aa10.98□□□□□ -0.65
CLDND1-231ENST00000515620 MT-CO3P00414 261 aa10.98□□□□□ -0.65
CLDND1-231ENST00000515620 RALAP11233 206 aa10.98□□□□□ -0.65
CLDND1-231ENST00000515620 HOXD9P28356 352 aaPredicted RBP10.98□□□□□ -0.65
CLDND1-231ENST00000515620 HLA-FP30511 346 aa10.98□□□□□ -0.65
CLDND1-231ENST00000515620 HOXD13P35453 343 aa10.98□□□□□ -0.65
CLDND1-231ENST00000515620 NDST1P52848 882 aa10.98□□□□□ -0.65
CLDND1-231ENST00000515620 GALCP54803 685 aa10.98□□□□□ -0.65
CLDND1-231ENST00000515620 NXPH1P58417 271 aa10.98□□□□□ -0.65
CLDND1-231ENST00000515620 GABREP78334 506 aa10.98□□□□□ -0.65
CLDND1-231ENST00000515620 COG7P83436 770 aa10.98□□□□□ -0.65
CLDND1-231ENST00000515620 VAC14Q08AM6 782 aa10.98□□□□□ -0.65
CLDND1-231ENST00000515620 KIAA1614Q5VZ46 1190 aa10.98□□□□□ -0.65
CLDND1-231ENST00000515620 CLEC20AQ6ZU45 233 aa10.98□□□□□ -0.65
CLDND1-231ENST00000515620 STXBP4Q6ZWJ1 553 aa10.98□□□□□ -0.65
CLDND1-231ENST00000515620 CHST9Q7L1S5 443 aa10.98□□□□□ -0.65
CLDND1-231ENST00000515620 CPXM2Q8N436 756 aa10.98□□□□□ -0.65
CLDND1-231ENST00000515620 GOLGA1Q92805 767 aa10.98□□□□□ -0.65
CLDND1-231ENST00000515620 GZF1Q9H116 711 aaPredicted RBP10.98□□□□□ -0.65
CLDND1-231ENST00000515620 PABPC3Q9H361 631 aaKnown RBP10.98□□□□□ -0.65
CLDND1-231ENST00000515620 MTG2Q9H4K7 406 aa10.98□□□□□ -0.65
CLDND1-231ENST00000515620 ABCB8Q9NUT2 735 aa10.98□□□□□ -0.65
CLDND1-231ENST00000515620 FBXL12Q9NXK8 326 aa10.98□□□□□ -0.65
CLDND1-231ENST00000515620 A0A1W2PR77 199 aa10.97□□□□□ -0.65
CLDND1-231ENST00000515620 CLIC2O15247 247 aa10.97□□□□□ -0.65
CLDND1-231ENST00000515620 SDC3O75056 442 aa10.97□□□□□ -0.65
CLDND1-231ENST00000515620 ACP1P24666 158 aa10.97□□□□□ -0.65
CLDND1-231ENST00000515620 TXLNAP40222 546 aa10.97□□□□□ -0.65
CLDND1-231ENST00000515620 CASP4P49662 377 aa10.97□□□□□ -0.65
CLDND1-231ENST00000515620 PSEN1P49768 467 aa10.97□□□□□ -0.65
CLDND1-231ENST00000515620 NFATC3Q12968 1075 aa10.97□□□□□ -0.65
CLDND1-231ENST00000515620 KCNJ12Q14500 433 aa10.97□□□□□ -0.65
CLDND1-231ENST00000515620 PROX2Q3B8N5 592 aa10.97□□□□□ -0.65
CLDND1-231ENST00000515620 USP30Q70CQ3 517 aa10.97□□□□□ -0.65
CLDND1-231ENST00000515620 KANSL1Q7Z3B3 1105 aa10.97□□□□□ -0.65
CLDND1-231ENST00000515620 CCDC186Q7Z3E2 898 aa10.97□□□□□ -0.65
CLDND1-231ENST00000515620 CCDC65Q8IXS2 484 aa10.97□□□□□ -0.65
CLDND1-231ENST00000515620 ZC3H3Q8IXZ2 948 aaKnown RBP10.97□□□□□ -0.65
CLDND1-231ENST00000515620 WFIKKN2Q8TEU8 576 aa10.97□□□□□ -0.65
CLDND1-231ENST00000515620 SNRNP27Q8WVK2 155 aaKnown RBP10.97□□□□□ -0.65
CLDND1-231ENST00000515620 SERAC1Q96JX3 654 aa10.97□□□□□ -0.65
CLDND1-231ENST00000515620 CDK5RAP1Q96SZ6 601 aaKnown RBP10.97□□□□□ -0.65
CLDND1-231ENST00000515620 VRTNQ9H8Y1 702 aa10.97□□□□□ -0.65
CLDND1-231ENST00000515620 AGPAT3Q9NRZ7 376 aa10.97□□□□□ -0.65
CLDND1-231ENST00000515620 IL17BQ9UHF5 180 aa10.97□□□□□ -0.65
CLDND1-231ENST00000515620 HEMK1Q9Y5R4 338 aaPredicted RBP10.97□□□□□ -0.65
CLDND1-231ENST00000515620 UBR5O95071 2799 aaPredicted RBP10.97□□□□□ -0.65
CLDND1-231ENST00000515620 A0A1W2PP55 124 aa10.96□□□□□ -0.65
CLDND1-231ENST00000515620 LRRC72A6NJI9 287 aa10.96□□□□□ -0.65
CLDND1-231ENST00000515620 TLR4O00206 839 aa10.96□□□□□ -0.65
CLDND1-231ENST00000515620 SIGLEC6O43699 453 aa10.96□□□□□ -0.65
CLDND1-231ENST00000515620 USP12O75317 370 aa10.96□□□□□ -0.65
CLDND1-231ENST00000515620 DXOO77932 396 aaKnown RBP10.96□□□□□ -0.65
CLDND1-231ENST00000515620 PABPC1P11940 636 aaKnown RBP10.96□□□□□ -0.65
CLDND1-231ENST00000515620 GJB2P29033 226 aa10.96□□□□□ -0.65
CLDND1-231ENST00000515620 STAT6P42226 847 aa10.96□□□□□ -0.65
CLDND1-231ENST00000515620 KIF11P52732 1056 aa10.96□□□□□ -0.65
CLDND1-231ENST00000515620 E2F1Q01094 437 aa10.96□□□□□ -0.65
CLDND1-231ENST00000515620 NCOA4Q13772 614 aa10.96□□□□□ -0.65
CLDND1-231ENST00000515620 BMT2Q1RMZ1 405 aa10.96□□□□□ -0.65
CLDND1-231ENST00000515620 MPPE1Q53F39 396 aa10.96□□□□□ -0.65
CLDND1-231ENST00000515620 SLC45A4Q5BKX6 768 aa10.96□□□□□ -0.65
CLDND1-231ENST00000515620 C6orf132Q5T0Z8 1188 aa10.96□□□□□ -0.65
CLDND1-231ENST00000515620 MBLAC2Q68D91 279 aa10.96□□□□□ -0.65
CLDND1-231ENST00000515620 RSRC2Q7L4I2 434 aaKnown RBP10.96□□□□□ -0.65
CLDND1-231ENST00000515620 ADIPOR2Q86V24 386 aa10.96□□□□□ -0.65
CLDND1-231ENST00000515620 LSMEM2Q8N112 164 aa10.96□□□□□ -0.65
CLDND1-231ENST00000515620 AHI1Q8N157 1196 aa10.96□□□□□ -0.65
CLDND1-231ENST00000515620 CRYBG2Q8N1P7 616 aa10.96□□□□□ -0.65
CLDND1-231ENST00000515620 OXR1Q8N573 874 aa10.96□□□□□ -0.65
CLDND1-231ENST00000515620 XXYLT1Q8NBI6 393 aa10.96□□□□□ -0.65
CLDND1-231ENST00000515620 OR2T34Q8NGX1 318 aa10.96□□□□□ -0.65
CLDND1-231ENST00000515620 VCPIP1Q96JH7 1222 aa10.96□□□□□ -0.65
CLDND1-231ENST00000515620 DPH1Q9BZG8 443 aa10.96□□□□□ -0.65
CLDND1-231ENST00000515620 FAM117AQ9C073 453 aa10.96□□□□□ -0.65
CLDND1-231ENST00000515620 RSPH9Q9H1X1 276 aaPredicted RBP10.96□□□□□ -0.65
CLDND1-231ENST00000515620 PNPLA8Q9NP80 782 aa10.96□□□□□ -0.65
CLDND1-231ENST00000515620 CLIC5Q9NZA1 410 aa10.96□□□□□ -0.65
CLDND1-231ENST00000515620 MARCH2Q9P0N8 246 aa10.96□□□□□ -0.65
CLDND1-231ENST00000515620 GGA2Q9UJY4 613 aa10.96□□□□□ -0.65
CLDND1-231ENST00000515620 STRIP2Q9ULQ0 834 aa10.96□□□□□ -0.65
CLDND1-231ENST00000515620 UNC79Q9P2D8 2635 aa10.95□□□□□ -0.66
CLDND1-231ENST00000515620 SLC12A8A0AV02 714 aa10.95□□□□□ -0.66
CLDND1-231ENST00000515620 TRIM38O00635 465 aa10.95□□□□□ -0.66
CLDND1-231ENST00000515620 MID1O15344 667 aa10.95□□□□□ -0.66
CLDND1-231ENST00000515620 TGFB1I1O43294 461 aa10.95□□□□□ -0.66
CLDND1-231ENST00000515620 RNASEH1O60930 286 aaKnown RBP10.95□□□□□ -0.66
CLDND1-231ENST00000515620 RNASEH2AO75792 299 aaKnown RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms