RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 N6AMT1Q9Y5N5 214 aa13.17□□□□□ -0.3
SMAD1-215ENST00000515385 C7orf72A4D263 438 aa13.16□□□□□ -0.3
SMAD1-215ENST00000515385 FAM159BA6NKW6 160 aa13.16□□□□□ -0.3
SMAD1-215ENST00000515385 CXorf49A8MYA2 514 aaPredicted RBP13.16□□□□□ -0.3
SMAD1-215ENST00000515385 CFAP99D6REC4 459 aa13.16□□□□□ -0.3
SMAD1-215ENST00000515385 APOC4-APOC2K7ER74 178 aa13.16□□□□□ -0.3
SMAD1-215ENST00000515385 PFDN6O15212 129 aa13.16□□□□□ -0.3
SMAD1-215ENST00000515385 GSRP00390 522 aa13.16□□□□□ -0.3
SMAD1-215ENST00000515385 CALCAP01258 141 aa13.16□□□□□ -0.3
SMAD1-215ENST00000515385 APOC2P02655 101 aa13.16□□□□□ -0.3
SMAD1-215ENST00000515385 XRCC1P18887 633 aaPredicted RBP13.16□□□□□ -0.3
SMAD1-215ENST00000515385 GNA15P30679 374 aa13.16□□□□□ -0.3
SMAD1-215ENST00000515385 EIF3EP60228 445 aaKnown RBP13.16□□□□□ -0.3
SMAD1-215ENST00000515385 CNTN2Q02246 1040 aa13.16□□□□□ -0.3
SMAD1-215ENST00000515385 HERC3Q15034 1050 aa13.16□□□□□ -0.3
SMAD1-215ENST00000515385 HADHQ16836 314 aaKnown RBP13.16□□□□□ -0.3
SMAD1-215ENST00000515385 DCUN1D2Q6PH85 259 aa13.16□□□□□ -0.3
SMAD1-215ENST00000515385 COLGALT2Q8IYK4 626 aa13.16□□□□□ -0.3
SMAD1-215ENST00000515385 PCYOX1LQ8NBM8 494 aa13.16□□□□□ -0.3
SMAD1-215ENST00000515385 STON2Q8WXE9 905 aa13.16□□□□□ -0.3
SMAD1-215ENST00000515385 SORT1Q99523 831 aa13.16□□□□□ -0.3
SMAD1-215ENST00000515385 C1orf50Q9BV19 199 aa13.16□□□□□ -0.3
SMAD1-215ENST00000515385 WDR18Q9BV38 432 aa13.16□□□□□ -0.3
SMAD1-215ENST00000515385 PARVBQ9HBI1 364 aa13.16□□□□□ -0.3
SMAD1-215ENST00000515385 POPDC2Q9HBU9 364 aa13.16□□□□□ -0.3
SMAD1-215ENST00000515385 PNPOQ9NVS9 261 aa13.16□□□□□ -0.3
SMAD1-215ENST00000515385 WRAP73Q9P2S5 460 aaPredicted RBP13.16□□□□□ -0.3
SMAD1-215ENST00000515385 TAF1P21675 1872 aa13.16□□□□□ -0.3
SMAD1-215ENST00000515385 A0A1B0GTW7 788 aa13.16□□□□□ -0.3
SMAD1-215ENST00000515385 F8VP50 259 aa13.16□□□□□ -0.3
SMAD1-215ENST00000515385 NOP56O00567 594 aaKnown RBP13.16□□□□□ -0.3
SMAD1-215ENST00000515385 NDUFB5O43674 189 aa13.16□□□□□ -0.3
SMAD1-215ENST00000515385 NOL3O60936 208 aaKnown RBP13.16□□□□□ -0.3
SMAD1-215ENST00000515385 STAMBPO95630 424 aa13.16□□□□□ -0.3
SMAD1-215ENST00000515385 LDHAP00338 332 aaKnown RBP13.16□□□□□ -0.3
SMAD1-215ENST00000515385 OSBPP22059 807 aa13.16□□□□□ -0.3
SMAD1-215ENST00000515385 RPL7AP62424 266 aaKnown RBP13.16□□□□□ -0.3
SMAD1-215ENST00000515385 YWHAZP63104 245 aaKnown RBP13.16□□□□□ -0.3
SMAD1-215ENST00000515385 ZNF252P-AS1Q0IIN9 211 aa13.16□□□□□ -0.3
SMAD1-215ENST00000515385 BMPR2Q13873 1038 aa13.16□□□□□ -0.3
SMAD1-215ENST00000515385 IRAK1BP1Q5VVH5 260 aa13.16□□□□□ -0.3
SMAD1-215ENST00000515385 SLFN13Q68D06 897 aa13.16□□□□□ -0.3
SMAD1-215ENST00000515385 CYS1Q717R9 158 aa13.16□□□□□ -0.3
SMAD1-215ENST00000515385 LYSMD3Q7Z3D4 306 aa13.16□□□□□ -0.3
SMAD1-215ENST00000515385 FAM71DQ8N9W8 422 aa13.16□□□□□ -0.3
SMAD1-215ENST00000515385 FAF2Q96CS3 445 aa13.16□□□□□ -0.3
SMAD1-215ENST00000515385 LENG8Q96PV6 779 aaPredicted RBP13.16□□□□□ -0.3
SMAD1-215ENST00000515385 PSD2Q9BQI7 771 aa13.16□□□□□ -0.3
SMAD1-215ENST00000515385 DCUN1D5Q9BTE7 237 aa13.16□□□□□ -0.3
SMAD1-215ENST00000515385 GBA3Q9H227 469 aa13.16□□□□□ -0.3
SMAD1-215ENST00000515385 COQ10BQ9H8M1 238 aa13.16□□□□□ -0.3
SMAD1-215ENST00000515385 PAK5Q9P286 719 aa13.16□□□□□ -0.3
SMAD1-215ENST00000515385 CCPG1Q9ULG6 757 aa13.16□□□□□ -0.3
SMAD1-215ENST00000515385 TRIM64A6NGJ6 449 aa13.15□□□□□ -0.3
SMAD1-215ENST00000515385 AIM2O14862 343 aa13.15□□□□□ -0.3
SMAD1-215ENST00000515385 PLIN3O60664 434 aa13.15□□□□□ -0.3
SMAD1-215ENST00000515385 RNASEH2AO75792 299 aaKnown RBP13.15□□□□□ -0.3
SMAD1-215ENST00000515385 LSM8O95777 96 aaKnown RBP13.15□□□□□ -0.3
SMAD1-215ENST00000515385 GLDCP23378 1020 aa13.15□□□□□ -0.3
SMAD1-215ENST00000515385 JAK1P23458 1154 aa13.15□□□□□ -0.3
SMAD1-215ENST00000515385 PIK3R1P27986 724 aa13.15□□□□□ -0.3
SMAD1-215ENST00000515385 EPHA3P29320 983 aa13.15□□□□□ -0.3
SMAD1-215ENST00000515385 HSPA1LP34931 641 aa13.15□□□□□ -0.3
SMAD1-215ENST00000515385 HK2P52789 917 aa13.15□□□□□ -0.3
SMAD1-215ENST00000515385 RPL10AP62906 217 aaKnown RBP13.15□□□□□ -0.3
SMAD1-215ENST00000515385 ATP1A4Q13733 1029 aa13.15□□□□□ -0.3
SMAD1-215ENST00000515385 NR1D2Q14995 579 aa13.15□□□□□ -0.3
SMAD1-215ENST00000515385 B3GNT9Q6UX72 402 aa13.15□□□□□ -0.3
SMAD1-215ENST00000515385 C15orf39Q6ZRI6 1047 aa13.15□□□□□ -0.3
SMAD1-215ENST00000515385 CACTIN-AS1Q8N1I8 211 aa13.15□□□□□ -0.3
SMAD1-215ENST00000515385 MMP19Q99542 508 aa13.15□□□□□ -0.3
SMAD1-215ENST00000515385 TPK1Q9H3S4 243 aa13.15□□□□□ -0.3
SMAD1-215ENST00000515385 CXorf21Q9HAI6 301 aa13.15□□□□□ -0.3
SMAD1-215ENST00000515385 XPNPEP1Q9NQW7 623 aa13.15□□□□□ -0.3
SMAD1-215ENST00000515385 NCKIPSDQ9NZQ3 722 aa13.15□□□□□ -0.3
SMAD1-215ENST00000515385 NYAP2Q9P242 653 aa13.15□□□□□ -0.3
SMAD1-215ENST00000515385 CNTN6Q9UQ52 1028 aa13.15□□□□□ -0.3
SMAD1-215ENST00000515385 TIMM22Q9Y584 194 aa13.15□□□□□ -0.3
SMAD1-215ENST00000515385 ROBO1Q9Y6N7 1651 aa13.15□□□□□ -0.3
SMAD1-215ENST00000515385 TCRBV5S1A1TA0A578 114 aa13.14□□□□□ -0.31
SMAD1-215ENST00000515385 H3BMQ9 156 aa13.14□□□□□ -0.31
SMAD1-215ENST00000515385 ACOT8O14734 319 aa13.14□□□□□ -0.31
SMAD1-215ENST00000515385 SPTLC1O15269 473 aa13.14□□□□□ -0.31
SMAD1-215ENST00000515385 AQP9O43315 295 aa13.14□□□□□ -0.31
SMAD1-215ENST00000515385 ZBTB14O43829 449 aa13.14□□□□□ -0.31
SMAD1-215ENST00000515385 ZMPSTE24O75844 475 aa13.14□□□□□ -0.31
SMAD1-215ENST00000515385 ATE1O95260 518 aa13.14□□□□□ -0.31
SMAD1-215ENST00000515385 ALOX5P09917 674 aa13.14□□□□□ -0.31
SMAD1-215ENST00000515385 PABPC1P11940 636 aaKnown RBP13.14□□□□□ -0.31
SMAD1-215ENST00000515385 ACO1P21399 889 aaKnown RBP13.14□□□□□ -0.31
SMAD1-215ENST00000515385 KDELR1P24390 212 aa13.14□□□□□ -0.31
SMAD1-215ENST00000515385 SHMT1P34896 483 aa13.14□□□□□ -0.31
SMAD1-215ENST00000515385 DYNLT1P63172 113 aa13.14□□□□□ -0.31
SMAD1-215ENST00000515385 ROR1Q01973 937 aa13.14□□□□□ -0.31
SMAD1-215ENST00000515385 TRIM16LQ309B1 348 aa13.14□□□□□ -0.31
SMAD1-215ENST00000515385 SPOPLQ6IQ16 392 aa13.14□□□□□ -0.31
SMAD1-215ENST00000515385 OGFOD2Q6N063 350 aa13.14□□□□□ -0.31
SMAD1-215ENST00000515385 MAP4K3Q8IVH8 894 aa13.14□□□□□ -0.31
SMAD1-215ENST00000515385 PACRGLQ8N7B6 248 aa13.14□□□□□ -0.31
SMAD1-215ENST00000515385 DUS3LQ96G46 650 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms