RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 PDCLQ13371 301 aa5.82□□□□□ -1.48
HMGCS1-207ENST00000514610 CBFBQ13951 182 aa5.82□□□□□ -1.48
HMGCS1-207ENST00000514610 PROSER3Q2NL68 480 aa5.82□□□□□ -1.48
HMGCS1-207ENST00000514610 KRTAP15-1Q3LI76 137 aa5.82□□□□□ -1.48
HMGCS1-207ENST00000514610 ZNF569Q5MCW4 686 aa5.82□□□□□ -1.48
HMGCS1-207ENST00000514610 FBXO47Q5MNV8 452 aa5.82□□□□□ -1.48
HMGCS1-207ENST00000514610 DGAT2L7PQ6IED9 249 aa5.82□□□□□ -1.48
HMGCS1-207ENST00000514610 TMEM65Q6PI78 240 aa5.82□□□□□ -1.48
HMGCS1-207ENST00000514610 SERPINA13PQ6UXR4 307 aa5.82□□□□□ -1.48
HMGCS1-207ENST00000514610 CHSY1Q86X52 802 aa5.82□□□□□ -1.48
HMGCS1-207ENST00000514610 BOLLQ8N9W6 283 aaKnown RBP5.82□□□□□ -1.48
HMGCS1-207ENST00000514610 UBXN10Q96LJ8 280 aa5.82□□□□□ -1.48
HMGCS1-207ENST00000514610 ARHGAP39Q9C0H5 1083 aa5.82□□□□□ -1.48
HMGCS1-207ENST00000514610 RRN3Q9NYV6 651 aa5.82□□□□□ -1.48
HMGCS1-207ENST00000514610 ZNHIT2Q9UHR6 403 aa5.82□□□□□ -1.48
HMGCS1-207ENST00000514610 COL11A2P13942 1736 aaPredicted RBP5.82□□□□□ -1.48
HMGCS1-207ENST00000514610 SPATA31A1Q5TZJ5 1347 aa5.81□□□□□ -1.48
HMGCS1-207ENST00000514610 MBD3L5A6NJ08 208 aaPredicted RBP5.81□□□□□ -1.48
HMGCS1-207ENST00000514610 TISP43B9A030 160 aa5.81□□□□□ -1.48
HMGCS1-207ENST00000514610 GCATO75600 419 aa5.81□□□□□ -1.48
HMGCS1-207ENST00000514610 GRK5P34947 590 aa5.81□□□□□ -1.48
HMGCS1-207ENST00000514610 STAT6P42226 847 aa5.81□□□□□ -1.48
HMGCS1-207ENST00000514610 TLE3Q04726 772 aa5.81□□□□□ -1.48
HMGCS1-207ENST00000514610 ADCK5Q3MIX3 580 aa5.81□□□□□ -1.48
HMGCS1-207ENST00000514610 LRRC24Q50LG9 513 aa5.81□□□□□ -1.48
HMGCS1-207ENST00000514610 KIAA1324Q6UXG2 1013 aaKnown RBP5.81□□□□□ -1.48
HMGCS1-207ENST00000514610 C2CD5Q86YS7 1000 aa5.81□□□□□ -1.48
HMGCS1-207ENST00000514610 LAS2Q8IYD9 372 aa5.81□□□□□ -1.48
HMGCS1-207ENST00000514610 ADAMTS18Q8TE60 1221 aa5.81□□□□□ -1.48
HMGCS1-207ENST00000514610 GOLGA1Q92805 767 aa5.81□□□□□ -1.48
HMGCS1-207ENST00000514610 SDCCAG3Q96C92 435 aa5.81□□□□□ -1.48
HMGCS1-207ENST00000514610 ZSCAN31Q96LW9 406 aaPredicted RBP5.81□□□□□ -1.48
HMGCS1-207ENST00000514610 CCDC17Q96LX7 622 aa5.81□□□□□ -1.48
HMGCS1-207ENST00000514610 MRIQ9BWK5 157 aa5.81□□□□□ -1.48
HMGCS1-207ENST00000514610 RNF26Q9BY78 433 aaPredicted RBP5.81□□□□□ -1.48
HMGCS1-207ENST00000514610 PCDHA10Q9Y5I2 948 aa5.81□□□□□ -1.48
HMGCS1-207ENST00000514610 BTBD19C9JJ37 291 aa5.8□□□□□ -1.48
HMGCS1-207ENST00000514610 POC1B-GALNT4F8VUJ3 575 aa5.8□□□□□ -1.48
HMGCS1-207ENST00000514610 AARSP49588 968 aaKnown RBP eCLIP5.8□□□□□ -1.48
HMGCS1-207ENST00000514610 ACTR2P61160 394 aa5.8□□□□□ -1.48
HMGCS1-207ENST00000514610 DCTN1Q14203 1278 aa5.8□□□□□ -1.48
HMGCS1-207ENST00000514610 SEC23BQ15437 767 aa5.8□□□□□ -1.48
HMGCS1-207ENST00000514610 CNGA3Q16281 694 aa5.8□□□□□ -1.48
HMGCS1-207ENST00000514610 TBRG1Q3YBR2 411 aa5.8□□□□□ -1.48
HMGCS1-207ENST00000514610 TMEM119Q4V9L6 283 aa5.8□□□□□ -1.48
HMGCS1-207ENST00000514610 FCRLBQ6BAA4 426 aa5.8□□□□□ -1.48
HMGCS1-207ENST00000514610 WDR93Q6P2C0 686 aa5.8□□□□□ -1.48
HMGCS1-207ENST00000514610 FBXO42Q6P3S6 717 aa5.8□□□□□ -1.48
HMGCS1-207ENST00000514610 RASGRP2Q7LDG7 609 aa5.8□□□□□ -1.48
HMGCS1-207ENST00000514610 GALNT4Q8N4A0 578 aa5.8□□□□□ -1.48
HMGCS1-207ENST00000514610 SLC2A12Q8TD20 617 aa5.8□□□□□ -1.48
HMGCS1-207ENST00000514610 PNISRQ8TF01 805 aaKnown RBP5.8□□□□□ -1.48
HMGCS1-207ENST00000514610 ASB12Q8WXK4 309 aa5.8□□□□□ -1.48
HMGCS1-207ENST00000514610 HIC2Q96JB3 615 aa5.8□□□□□ -1.48
HMGCS1-207ENST00000514610 FYTTD1Q96QD9 318 aaKnown RBP5.8□□□□□ -1.48
HMGCS1-207ENST00000514610 CHODLQ9H9P2 273 aa5.8□□□□□ -1.48
HMGCS1-207ENST00000514610 ASNSD1Q9NWL6 643 aa5.8□□□□□ -1.48
HMGCS1-207ENST00000514610 B3GNT3Q9Y2A9 372 aa5.8□□□□□ -1.48
HMGCS1-207ENST00000514610 TBC1D3DA0A087WVF3 549 aa5.79□□□□□ -1.48
HMGCS1-207ENST00000514610 TBC1D3IA0A087WXS9 549 aa5.79□□□□□ -1.48
HMGCS1-207ENST00000514610 TBC1D3EA0A087X179 549 aa5.79□□□□□ -1.48
HMGCS1-207ENST00000514610 TBC1D3KA0A087X1G2 549 aa5.79□□□□□ -1.48
HMGCS1-207ENST00000514610 TBC1D3BA6NDS4 549 aa5.79□□□□□ -1.48
HMGCS1-207ENST00000514610 TBC1D3FA6NER0 549 aaPredicted RBP5.79□□□□□ -1.48
HMGCS1-207ENST00000514610 TBC1D3LB9A6J9 549 aa5.79□□□□□ -1.48
HMGCS1-207ENST00000514610 NUDT3O95989 172 aa5.79□□□□□ -1.48
HMGCS1-207ENST00000514610 TBC1D3HP0C7X1 549 aa5.79□□□□□ -1.48
HMGCS1-207ENST00000514610 IGFBP2P18065 325 aa5.79□□□□□ -1.48
HMGCS1-207ENST00000514610 RXRAP19793 462 aa5.79□□□□□ -1.48
HMGCS1-207ENST00000514610 BMP5P22003 454 aa5.79□□□□□ -1.48
HMGCS1-207ENST00000514610 SLC8A1P32418 973 aa5.79□□□□□ -1.48
HMGCS1-207ENST00000514610 HOXD12P35452 270 aa5.79□□□□□ -1.48
HMGCS1-207ENST00000514610 VPS41P49754 854 aa5.79□□□□□ -1.48
HMGCS1-207ENST00000514610 ZNF84P51523 738 aa5.79□□□□□ -1.48
HMGCS1-207ENST00000514610 RCAN1P53805 252 aa5.79□□□□□ -1.48
HMGCS1-207ENST00000514610 KPNB1Q14974 876 aaKnown RBP5.79□□□□□ -1.48
HMGCS1-207ENST00000514610 FAM110CQ1W6H9 321 aa5.79□□□□□ -1.48
HMGCS1-207ENST00000514610 PRAMEF17Q5VTA0 474 aa5.79□□□□□ -1.48
HMGCS1-207ENST00000514610 TBC1D3GQ6DHY5 549 aa5.79□□□□□ -1.48
HMGCS1-207ENST00000514610 SUMO4Q6EEV6 95 aa5.79□□□□□ -1.48
HMGCS1-207ENST00000514610 TBC1D3CQ6IPX1 549 aa5.79□□□□□ -1.48
HMGCS1-207ENST00000514610 SYNE3Q6ZMZ3 975 aa5.79□□□□□ -1.48
HMGCS1-207ENST00000514610 ANKS1BQ7Z6G8 1248 aa5.79□□□□□ -1.48
HMGCS1-207ENST00000514610 TFAP2DQ7Z6R9 452 aa5.79□□□□□ -1.48
HMGCS1-207ENST00000514610 CPOQ8IVL8 374 aa5.79□□□□□ -1.48
HMGCS1-207ENST00000514610 TBC1D3Q8IZP1 549 aaPredicted RBP5.79□□□□□ -1.48
HMGCS1-207ENST00000514610 PNLDC1Q8NA58 520 aaKnown RBP5.79□□□□□ -1.48
HMGCS1-207ENST00000514610 GPR78Q96P69 363 aa5.79□□□□□ -1.48
HMGCS1-207ENST00000514610 PYM1Q9BRP8 204 aaKnown RBP5.79□□□□□ -1.48
HMGCS1-207ENST00000514610 HERC2P3Q9BVR0 1158 aa5.79□□□□□ -1.48
HMGCS1-207ENST00000514610 GATA5Q9BWX5 397 aaPredicted RBP5.79□□□□□ -1.48
HMGCS1-207ENST00000514610 RIOX1Q9H6W3 641 aa5.79□□□□□ -1.48
HMGCS1-207ENST00000514610 CYP3A7-CYP3A51PA0A087WV96 503 aa5.78□□□□□ -1.48
HMGCS1-207ENST00000514610 RRHO14718 337 aa5.78□□□□□ -1.48
HMGCS1-207ENST00000514610 NCAM2O15394 837 aa5.78□□□□□ -1.48
HMGCS1-207ENST00000514610 PROP1O75360 226 aa5.78□□□□□ -1.48
HMGCS1-207ENST00000514610 TFRCP02786 760 aaKnown RBP5.78□□□□□ -1.48
HMGCS1-207ENST00000514610 CHRM5P08912 532 aaPredicted RBP5.78□□□□□ -1.48
HMGCS1-207ENST00000514610 CYP3A7P24462 503 aa5.78□□□□□ -1.48
HMGCS1-207ENST00000514610 IDUAP35475 653 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms