RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 TKTL2Q9H0I9 626 aa10.17□□□□□ -0.78
TOPBP1-209ENST00000513818 EPHX3Q9H6B9 360 aa10.17□□□□□ -0.78
TOPBP1-209ENST00000513818 ARHGEF3Q9NR81 526 aa10.17□□□□□ -0.78
TOPBP1-209ENST00000513818 GPATCH2LQ9NWQ4 482 aa10.17□□□□□ -0.78
TOPBP1-209ENST00000513818 TRIM10Q9UDY6 481 aa10.17□□□□□ -0.78
TOPBP1-209ENST00000513818 PCDHA13Q9Y5I0 950 aa10.17□□□□□ -0.78
TOPBP1-209ENST00000513818 ANTXRLA6NF34 631 aa10.16□□□□□ -0.78
TOPBP1-209ENST00000513818 SHISA7A6NL88 538 aa10.16□□□□□ -0.78
TOPBP1-209ENST00000513818 SPECC1L-ADORA2AF8WAN1 911 aa10.16□□□□□ -0.78
TOPBP1-209ENST00000513818 TNFRSF10AO00220 468 aa10.16□□□□□ -0.78
TOPBP1-209ENST00000513818 SLC9A3R1O14745 358 aaPredicted RBP10.16□□□□□ -0.78
TOPBP1-209ENST00000513818 TRIM24O15164 1050 aa10.16□□□□□ -0.78
TOPBP1-209ENST00000513818 PAGE1O75459 146 aa10.16□□□□□ -0.78
TOPBP1-209ENST00000513818 LCA5LO95447 670 aa10.16□□□□□ -0.78
TOPBP1-209ENST00000513818 PTMAP06454 111 aaKnown RBP10.16□□□□□ -0.78
TOPBP1-209ENST00000513818 ADH5P11766 374 aa10.16□□□□□ -0.78
TOPBP1-209ENST00000513818 CCR1P32246 355 aa10.16□□□□□ -0.78
TOPBP1-209ENST00000513818 CTHP32929 405 aa10.16□□□□□ -0.78
TOPBP1-209ENST00000513818 GJA4P35212 333 aa10.16□□□□□ -0.78
TOPBP1-209ENST00000513818 GJC1P36383 396 aa10.16□□□□□ -0.78
TOPBP1-209ENST00000513818 SLC11A2P49281 568 aa10.16□□□□□ -0.78
TOPBP1-209ENST00000513818 CXCR3P49682 368 aa10.16□□□□□ -0.78
TOPBP1-209ENST00000513818 KDSRQ06136 332 aa10.16□□□□□ -0.78
TOPBP1-209ENST00000513818 RING1Q06587 406 aa10.16□□□□□ -0.78
TOPBP1-209ENST00000513818 MESP2Q0VG99 397 aa10.16□□□□□ -0.78
TOPBP1-209ENST00000513818 SLC44A4Q53GD3 710 aa10.16□□□□□ -0.78
TOPBP1-209ENST00000513818 MS4A13Q5J8X5 152 aa10.16□□□□□ -0.78
TOPBP1-209ENST00000513818 RHBDF2Q6PJF5 856 aa10.16□□□□□ -0.78
TOPBP1-209ENST00000513818 SND1Q7KZF4 910 aaKnown RBP eCLIP10.16□□□□□ -0.78
TOPBP1-209ENST00000513818 ARCQ7LC44 396 aa10.16□□□□□ -0.78
TOPBP1-209ENST00000513818 STRADAQ7RTN6 431 aa10.16□□□□□ -0.78
TOPBP1-209ENST00000513818 C14orf80Q86SX3 495 aa10.16□□□□□ -0.78
TOPBP1-209ENST00000513818 SFTPA1Q8IWL2 248 aa10.16□□□□□ -0.78
TOPBP1-209ENST00000513818 UNC45BQ8IWX7 931 aa10.16□□□□□ -0.78
TOPBP1-209ENST00000513818 UBALD2Q8IYN6 164 aa10.16□□□□□ -0.78
TOPBP1-209ENST00000513818 CFAP52Q8N1V2 620 aa10.16□□□□□ -0.78
TOPBP1-209ENST00000513818 ARFGAP1Q8N6T3 406 aa10.16□□□□□ -0.78
TOPBP1-209ENST00000513818 ATP6V0D2Q8N8Y2 350 aa10.16□□□□□ -0.78
TOPBP1-209ENST00000513818 ANP32BQ92688 251 aaKnown RBP10.16□□□□□ -0.78
TOPBP1-209ENST00000513818 DNASE1L2Q92874 299 aa10.16□□□□□ -0.78
TOPBP1-209ENST00000513818 PGAP3Q96FM1 320 aaPredicted RBP10.16□□□□□ -0.78
TOPBP1-209ENST00000513818 PEBP4Q96S96 227 aa10.16□□□□□ -0.78
TOPBP1-209ENST00000513818 CNPY3Q9BT09 278 aa10.16□□□□□ -0.78
TOPBP1-209ENST00000513818 BBS2Q9BXC9 721 aa10.16□□□□□ -0.78
TOPBP1-209ENST00000513818 FOXQ1Q9C009 403 aa10.16□□□□□ -0.78
TOPBP1-209ENST00000513818 DCLK3Q9C098 648 aa10.16□□□□□ -0.78
TOPBP1-209ENST00000513818 SIK2Q9H0K1 926 aa10.16□□□□□ -0.78
TOPBP1-209ENST00000513818 KCNF1Q9H3M0 494 aa10.16□□□□□ -0.78
TOPBP1-209ENST00000513818 GOLPH3Q9H4A6 298 aa10.16□□□□□ -0.78
TOPBP1-209ENST00000513818 WDCPQ9H6R7 721 aa10.16□□□□□ -0.78
TOPBP1-209ENST00000513818 MRPL47Q9HD33 250 aaKnown RBP10.16□□□□□ -0.78
TOPBP1-209ENST00000513818 SPHK2Q9NRA0 654 aa10.16□□□□□ -0.78
TOPBP1-209ENST00000513818 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.16□□□□□ -0.78
TOPBP1-209ENST00000513818 RRN3Q9NYV6 651 aa10.16□□□□□ -0.78
TOPBP1-209ENST00000513818 STIM2Q9P246 746 aa10.16□□□□□ -0.78
TOPBP1-209ENST00000513818 TBC1D14Q9P2M4 693 aa10.16□□□□□ -0.78
TOPBP1-209ENST00000513818 PCSK1NQ9UHG2 260 aa10.16□□□□□ -0.78
TOPBP1-209ENST00000513818 VANGL2Q9ULK5 521 aa10.16□□□□□ -0.78
TOPBP1-209ENST00000513818 CLEC4EQ9ULY5 219 aa10.16□□□□□ -0.78
TOPBP1-209ENST00000513818 NDRG2Q9UN36 371 aaKnown RBP10.16□□□□□ -0.78
TOPBP1-209ENST00000513818 HYOU1Q9Y4L1 999 aa10.16□□□□□ -0.78
TOPBP1-209ENST00000513818 HS3ST4Q9Y661 456 aa10.16□□□□□ -0.78
TOPBP1-209ENST00000513818 TECTAO75443 2155 aa10.15□□□□□ -0.78
TOPBP1-209ENST00000513818 KCNU1A8MYU2 1149 aa10.15□□□□□ -0.78
TOPBP1-209ENST00000513818 BUB1O43683 1085 aa10.15□□□□□ -0.78
TOPBP1-209ENST00000513818 LRCH4O75427 683 aa10.15□□□□□ -0.78
TOPBP1-209ENST00000513818 ENDOD1O94919 500 aa10.15□□□□□ -0.78
TOPBP1-209ENST00000513818 IPO7O95373 1038 aaKnown RBP10.15□□□□□ -0.78
TOPBP1-209ENST00000513818 ADH1CP00326 375 aa10.15□□□□□ -0.78
TOPBP1-209ENST00000513818 TYRP14679 529 aa10.15□□□□□ -0.78
TOPBP1-209ENST00000513818 TACR2P21452 398 aa10.15□□□□□ -0.78
TOPBP1-209ENST00000513818 SLC6A11P48066 632 aa10.15□□□□□ -0.78
TOPBP1-209ENST00000513818 RPS24P62847 133 aaKnown RBP10.15□□□□□ -0.78
TOPBP1-209ENST00000513818 PFKPQ01813 784 aa10.15□□□□□ -0.78
TOPBP1-209ENST00000513818 MESDQ14696 234 aa10.15□□□□□ -0.78
TOPBP1-209ENST00000513818 PPP2R5DQ14738 602 aa10.15□□□□□ -0.78
TOPBP1-209ENST00000513818 PON2Q15165 354 aa10.15□□□□□ -0.78
TOPBP1-209ENST00000513818 CA9Q16790 459 aa10.15□□□□□ -0.78
TOPBP1-209ENST00000513818 SMTNL2Q2TAL5 461 aa10.15□□□□□ -0.78
TOPBP1-209ENST00000513818 FYB2Q5VWT5 728 aa10.15□□□□□ -0.78
TOPBP1-209ENST00000513818 TXNRD3NBQ6F5E7 133 aa10.15□□□□□ -0.78
TOPBP1-209ENST00000513818 KIAA1328Q86T90 577 aa10.15□□□□□ -0.78
TOPBP1-209ENST00000513818 LRRC8AQ8IWT6 810 aa10.15□□□□□ -0.78
TOPBP1-209ENST00000513818 ADGRG2Q8IZP9 1017 aa10.15□□□□□ -0.78
TOPBP1-209ENST00000513818 LGI2Q8N0V4 545 aa10.15□□□□□ -0.78
TOPBP1-209ENST00000513818 PYROXD2Q8N2H3 581 aa10.15□□□□□ -0.78
TOPBP1-209ENST00000513818 FLCNQ8NFG4 579 aa10.15□□□□□ -0.78
TOPBP1-209ENST00000513818 SLC35G2Q8TBE7 412 aa10.15□□□□□ -0.78
TOPBP1-209ENST00000513818 WFDC5Q8TCV5 224 aa10.15□□□□□ -0.78
TOPBP1-209ENST00000513818 RFFLQ8WZ73 363 aa10.15□□□□□ -0.78
TOPBP1-209ENST00000513818 CENPIQ92674 756 aaPredicted RBP10.15□□□□□ -0.78
TOPBP1-209ENST00000513818 EDAQ92838 391 aa10.15□□□□□ -0.78
TOPBP1-209ENST00000513818 PDLIM2Q96JY6 352 aa10.15□□□□□ -0.78
TOPBP1-209ENST00000513818 LACRTQ9GZZ8 138 aa10.15□□□□□ -0.78
TOPBP1-209ENST00000513818 KLHL11Q9NVR0 708 aa10.15□□□□□ -0.78
TOPBP1-209ENST00000513818 ARHGEF38Q9NXL2 777 aa10.15□□□□□ -0.78
TOPBP1-209ENST00000513818 SALL4Q9UJQ4 1053 aa10.15□□□□□ -0.78
TOPBP1-209ENST00000513818 NCOR1O75376 2440 aa10.14□□□□□ -0.79
TOPBP1-209ENST00000513818 TMEM221A6NGB7 291 aa10.14□□□□□ -0.79
TOPBP1-209ENST00000513818 F5H5T6 163 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms