RNA–Protein interactions for RNA: ENST00000513016.5

VCAN-209, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 8,483 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-209ENST00000513016 AGTP01019 485 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 FYNP06241 537 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 YBX3P16989 372 aaKnown RBP eCLIP4.35□□□□□ -1.71
VCAN-209ENST00000513016 MTHFRP42898 656 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 SMAD3P84022 425 aaKnown RBP4.35□□□□□ -1.71
VCAN-209ENST00000513016 GCNT1Q02742 428 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 RGS1Q08116 209 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 UBXN2BQ14CS0 331 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 NDUFA9Q16795 377 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 C3orf67Q6ZVT6 689 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 C16orf59Q7L2K0 433 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 TTC7BQ86TV6 843 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 METTL16Q86W50 562 aaKnown RBP4.35□□□□□ -1.71
VCAN-209ENST00000513016 DEFB106AQ8N104 65 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 C3orf20Q8ND61 904 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 COPS5Q92905 334 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 ZNF333Q96JL9 665 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 FEM1CQ96JP0 617 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 FAM161BQ96MY7 647 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 BBS4Q96RK4 519 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 PADI4Q9UM07 663 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 FRMPD4Q14CM0 1322 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 C16orf96A6NNT2 1141 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 EIF3HO15372 352 aaKnown RBP eCLIP4.35□□□□□ -1.71
VCAN-209ENST00000513016 PROSCO94903 275 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 OR6A2O95222 327 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 HLA-DPA1P20036 260 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 RAP1GAPP47736 663 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 FXR1P51114 621 aaKnown RBP eCLIP4.35□□□□□ -1.71
VCAN-209ENST00000513016 PTENP60484 403 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 CDH17Q12864 832 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 SNCBQ16143 134 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 PRR23CQ6ZRP0 262 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 C16orf62Q7Z3J2 963 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 GLT6D1Q7Z4J2 308 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 C17orf53Q8N3J3 647 aaPredicted RBP4.35□□□□□ -1.71
VCAN-209ENST00000513016 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.35□□□□□ -1.71
VCAN-209ENST00000513016 SLC2A14Q8TDB8 520 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 FAIM2Q9BWQ8 316 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 FANCFQ9NPI8 374 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 BTBD7Q9P203 1132 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 GMEB2Q9UKD1 530 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 CHMP2BQ9UQN3 213 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 PCDHB11Q9Y5F2 797 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 RPS6KL1Q9Y6S9 549 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 A0A1B0GTH6 734 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 ANKDD1BA6NHY2 528 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 DGKAP23743 735 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 OR1D2P34982 312 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 MMP13P45452 471 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 BLKP51451 505 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 XKR4Q5GH76 650 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 RASIP1Q5U651 963 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 CYP20A1Q6UW02 462 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 RBM43Q6ZSC3 357 aaKnown RBP4.35□□□□□ -1.71
VCAN-209ENST00000513016 FAM71DQ8N9W8 422 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 RFWD2Q8NHY2 731 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 ZFP28Q8NHY6 868 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 WNT8BQ93098 351 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 PPP1R14AQ96A00 147 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 ACDQ96AP0 544 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 ELAC2Q9BQ52 826 aaKnown RBP4.35□□□□□ -1.71
VCAN-209ENST00000513016 TAS2R13Q9NYV9 303 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 TBC1D3DA0A087WVF3 549 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 TBC1D3IA0A087WXS9 549 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 TBC1D3EA0A087X179 549 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 TBC1D3KA0A087X1G2 549 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 TBC1D3FA6NER0 549 aaPredicted RBP4.35□□□□□ -1.71
VCAN-209ENST00000513016 TBC1D3LB9A6J9 549 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 TADA3O75528 432 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 RASSF9O75901 435 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 TBC1D3HP0C7X1 549 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 NPR3P17342 541 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 CYP2F1P24903 491 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 MAGEA4P43358 317 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 RFX3P48380 749 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 PSMC6P62333 389 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 TOMM20Q15388 145 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 CNGA2Q16280 664 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 WSCD1Q658N2 575 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 TBC1D3GQ6DHY5 549 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 RAET1GQ6H3X3 334 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 TBC1D3CQ6IPX1 549 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 PDE12Q6L8Q7 609 aaKnown RBP4.35□□□□□ -1.71
VCAN-209ENST00000513016 C3orf62Q6ZUJ4 267 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 MON1AQ86VX9 555 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 TBC1D3Q8IZP1 549 aaPredicted RBP4.35□□□□□ -1.71
VCAN-209ENST00000513016 SGSM3Q96HU1 749 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 MAML3Q96JK9 1138 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 ZYG11BQ9C0D3 744 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 KCTD10Q9H3F6 313 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 PCMTD2Q9NV79 361 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 DZANK1Q9NVP4 752 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 NCDNQ9UBB6 729 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 LTBP3Q9NS15 1303 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 TM9SF1O15321 606 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 SLITRK3O94933 977 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 SGPL1O95470 568 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 PRNPP04156 253 aa4.35□□□□□ -1.71
VCAN-209ENST00000513016 ENO2P09104 434 aaPredicted RBP4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms