RNA–Protein interactions for RNA: ENST00000510906.5

PDPN-209, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 786 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-209ENST00000510906 PWP1Q13610 501 aa9.06□□□□□ -0.96
PDPN-209ENST00000510906 MORC3Q14149 939 aa9.06□□□□□ -0.96
PDPN-209ENST00000510906 LPAL2Q16609 132 aa9.06□□□□□ -0.96
PDPN-209ENST00000510906 PERM1Q5SV97 790 aa9.06□□□□□ -0.96
PDPN-209ENST00000510906 TTI2Q6NXR4 508 aa9.06□□□□□ -0.96
PDPN-209ENST00000510906 ADAMTSL4Q6UY14 1074 aa9.06□□□□□ -0.96
PDPN-209ENST00000510906 KIAA2013Q8IYS2 634 aa9.06□□□□□ -0.96
PDPN-209ENST00000510906 ADGRG2Q8IZP9 1017 aa9.06□□□□□ -0.96
PDPN-209ENST00000510906 SLC4A11Q8NBS3 891 aa9.06□□□□□ -0.96
PDPN-209ENST00000510906 SLC35C1Q96A29 364 aa9.06□□□□□ -0.96
PDPN-209ENST00000510906 PLD4Q96BZ4 506 aa9.06□□□□□ -0.96
PDPN-209ENST00000510906 DHTKD1Q96HY7 919 aaPredicted RBP9.06□□□□□ -0.96
PDPN-209ENST00000510906 HEXIM2Q96MH2 286 aaKnown RBP9.06□□□□□ -0.96
PDPN-209ENST00000510906 TRIM56Q9BRZ2 755 aaKnown RBP9.06□□□□□ -0.96
PDPN-209ENST00000510906 GTPBP4Q9BZE4 634 aaKnown RBP9.06□□□□□ -0.96
PDPN-209ENST00000510906 NMUR1Q9HB89 426 aa9.06□□□□□ -0.96
PDPN-209ENST00000510906 COMMD8Q9NX08 183 aa9.06□□□□□ -0.96
PDPN-209ENST00000510906 OSER1Q9NX31 292 aa9.06□□□□□ -0.96
PDPN-209ENST00000510906 COQ4Q9Y3A0 265 aa9.06□□□□□ -0.96
PDPN-209ENST00000510906 DENND4CQ5VZ89 1909 aa9.05□□□□□ -0.96
PDPN-209ENST00000510906 E2F8A0AVK6 867 aa9.05□□□□□ -0.96
PDPN-209ENST00000510906 MED19A0JLT2 244 aaPredicted RBP9.05□□□□□ -0.96
PDPN-209ENST00000510906 ENC1O14682 589 aa9.05□□□□□ -0.96
PDPN-209ENST00000510906 SLC9A3R1O14745 358 aaPredicted RBP9.05□□□□□ -0.96
PDPN-209ENST00000510906 CELA3AP09093 270 aa9.05□□□□□ -0.96
PDPN-209ENST00000510906 IRF1P10914 325 aa9.05□□□□□ -0.96
PDPN-209ENST00000510906 SLC6A11P48066 632 aa9.05□□□□□ -0.96
PDPN-209ENST00000510906 TUBP50607 506 aa9.05□□□□□ -0.96
PDPN-209ENST00000510906 KIF11P52732 1056 aa9.05□□□□□ -0.96
PDPN-209ENST00000510906 STX17P56962 302 aa9.05□□□□□ -0.96
PDPN-209ENST00000510906 MESP2Q0VG99 397 aa9.05□□□□□ -0.96
PDPN-209ENST00000510906 LRMPQ12912 555 aa9.05□□□□□ -0.96
PDPN-209ENST00000510906 CUL2Q13617 745 aa9.05□□□□□ -0.96
PDPN-209ENST00000510906 DHCR24Q15392 516 aa9.05□□□□□ -0.96
PDPN-209ENST00000510906 RHBDF2Q6PJF5 856 aa9.05□□□□□ -0.96
PDPN-209ENST00000510906 LONP2Q86WA8 852 aa9.05□□□□□ -0.96
PDPN-209ENST00000510906 DDX42Q86XP3 938 aaKnown RBP eCLIP9.05□□□□□ -0.96
PDPN-209ENST00000510906 KIAA1958Q8N8K9 716 aa9.05□□□□□ -0.96
PDPN-209ENST00000510906 RPLP0P6Q8NHW5 317 aa9.05□□□□□ -0.96
PDPN-209ENST00000510906 NELFBQ8WX92 580 aa9.05□□□□□ -0.96
PDPN-209ENST00000510906 TMEM176AQ96HP8 235 aa9.05□□□□□ -0.96
PDPN-209ENST00000510906 FAXDC2Q96IV6 333 aa9.05□□□□□ -0.96
PDPN-209ENST00000510906 RHOVQ96L33 236 aa9.05□□□□□ -0.96
PDPN-209ENST00000510906 DUSP16Q9BY84 665 aa9.05□□□□□ -0.96
PDPN-209ENST00000510906 NACA2Q9H009 215 aa9.05□□□□□ -0.96
PDPN-209ENST00000510906 ADAM19Q9H013 955 aa9.05□□□□□ -0.96
PDPN-209ENST00000510906 MUC3BQ9H195 1237 aa9.05□□□□□ -0.96
PDPN-209ENST00000510906 FBXO44Q9H4M3 255 aa9.05□□□□□ -0.96
PDPN-209ENST00000510906 TLR8Q9NR97 1041 aaKnown RBP9.05□□□□□ -0.96
PDPN-209ENST00000510906 NCDNQ9UBB6 729 aa9.05□□□□□ -0.96
PDPN-209ENST00000510906 NUDT5Q9UKK9 219 aa9.05□□□□□ -0.96
PDPN-209ENST00000510906 SOX13Q9UN79 622 aa9.05□□□□□ -0.96
PDPN-209ENST00000510906 CTNND2Q9UQB3 1225 aa9.05□□□□□ -0.96
PDPN-209ENST00000510906 SCML2Q9UQR0 700 aa9.05□□□□□ -0.96
PDPN-209ENST00000510906 GREB1Q4ZG55 1949 aa9.05□□□□□ -0.96
PDPN-209ENST00000510906 ANAPC1Q9H1A4 1944 aa9.05□□□□□ -0.96
PDPN-209ENST00000510906 A0A1W2PQH9 124 aa9.04□□□□□ -0.96
PDPN-209ENST00000510906 MDM4O15151 490 aa9.04□□□□□ -0.96
PDPN-209ENST00000510906 ATG13O75143 517 aa9.04□□□□□ -0.96
PDPN-209ENST00000510906 RARGP13631 454 aa9.04□□□□□ -0.96
PDPN-209ENST00000510906 HOXA6P31267 233 aa9.04□□□□□ -0.96
PDPN-209ENST00000510906 PPP1R2P41236 205 aa9.04□□□□□ -0.96
PDPN-209ENST00000510906 FMO5P49326 533 aa9.04□□□□□ -0.96
PDPN-209ENST00000510906 CCDC40Q4G0X9 1142 aa9.04□□□□□ -0.96
PDPN-209ENST00000510906 FBXO43Q4G163 708 aa9.04□□□□□ -0.96
PDPN-209ENST00000510906 LY6G5CQ5SRR4 150 aa9.04□□□□□ -0.96
PDPN-209ENST00000510906 ARHGAP17Q68EM7 881 aa9.04□□□□□ -0.96
PDPN-209ENST00000510906 PRR23BQ6ZRT6 265 aa9.04□□□□□ -0.96
PDPN-209ENST00000510906 SCD5Q86SK9 330 aa9.04□□□□□ -0.96
PDPN-209ENST00000510906 C12orf40Q86WS4 652 aa9.04□□□□□ -0.96
PDPN-209ENST00000510906 TTC30AQ86WT1 665 aa9.04□□□□□ -0.96
PDPN-209ENST00000510906 SFTPA1Q8IWL2 248 aa9.04□□□□□ -0.96
PDPN-209ENST00000510906 BBS7Q8IWZ6 715 aa9.04□□□□□ -0.96
PDPN-209ENST00000510906 TTC39CQ8N584 583 aa9.04□□□□□ -0.96
PDPN-209ENST00000510906 UBXN4Q92575 508 aa9.04□□□□□ -0.96
PDPN-209ENST00000510906 TTC9Q92623 222 aa9.04□□□□□ -0.96
PDPN-209ENST00000510906 EXOC4Q96A65 974 aa9.04□□□□□ -0.96
PDPN-209ENST00000510906 TMEM74Q96NL1 305 aa9.04□□□□□ -0.96
PDPN-209ENST00000510906 DNAI2Q9GZS0 605 aa9.04□□□□□ -0.96
PDPN-209ENST00000510906 METTL14Q9HCE5 456 aaKnown RBP9.04□□□□□ -0.96
PDPN-209ENST00000510906 PNPLA8Q9NP80 782 aa9.04□□□□□ -0.96
PDPN-209ENST00000510906 CHMP5Q9NZZ3 219 aa9.04□□□□□ -0.96
PDPN-209ENST00000510906 TBC1D14Q9P2M4 693 aa9.04□□□□□ -0.96
PDPN-209ENST00000510906 SLC8A2Q9UPR5 921 aa9.04□□□□□ -0.96
PDPN-209ENST00000510906 SH3BP1Q9Y3L3 701 aa9.04□□□□□ -0.96
PDPN-209ENST00000510906 MAP1BP46821 2468 aaKnown RBP9.04□□□□□ -0.96
PDPN-209ENST00000510906 FANCMQ8IYD8 2048 aa9.04□□□□□ -0.96
PDPN-209ENST00000510906 ELOA3CA0A087WX78 387 aaPredicted RBP9.03□□□□□ -0.96
PDPN-209ENST00000510906 ELOA3DA6NLF2 546 aaPredicted RBP9.03□□□□□ -0.96
PDPN-209ENST00000510906 K7EQS6 105 aa9.03□□□□□ -0.96
PDPN-209ENST00000510906 TULP2O00295 520 aa9.03□□□□□ -0.96
PDPN-209ENST00000510906 GREM1O60565 184 aa9.03□□□□□ -0.96
PDPN-209ENST00000510906 ADH5P11766 374 aa9.03□□□□□ -0.96
PDPN-209ENST00000510906 CD19P15391 556 aa9.03□□□□□ -0.96
PDPN-209ENST00000510906 ATP5C1P36542 298 aaKnown RBP9.03□□□□□ -0.96
PDPN-209ENST00000510906 UBE2HP62256 183 aa9.03□□□□□ -0.96
PDPN-209ENST00000510906 KDSRQ06136 332 aa9.03□□□□□ -0.96
PDPN-209ENST00000510906 PAK1Q13153 545 aa9.03□□□□□ -0.96
PDPN-209ENST00000510906 SIM2Q14190 667 aaPredicted RBP9.03□□□□□ -0.96
PDPN-209ENST00000510906 DMC1Q14565 340 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms