RNA–Protein interactions for RNA: ENST00000509900.5

PTPN20-223, Transcript of protein tyrosine phosphatase, non-receptor type 20, human

TSL 1 (best) BASIC

Gene PTPN20, Length 693 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN20-223	ENST00000509900	HTR3D	Q70Z44	454 aa		10.11	□□□□□ -0.79
PTPN20-223	ENST00000509900	SPATS2	Q86XZ4	545 aa	Known RBP	10.11	□□□□□ -0.79
PTPN20-223	ENST00000509900	ERMN	Q8TAM6	284 aa		10.11	□□□□□ -0.79
PTPN20-223	ENST00000509900	SPATA20	Q8TB22	786 aa		10.11	□□□□□ -0.79
PTPN20-223	ENST00000509900	SORCS1	Q8WY21	1168 aa		10.11	□□□□□ -0.79
PTPN20-223	ENST00000509900	SKA1	Q96BD8	255 aa		10.11	□□□□□ -0.79
PTPN20-223	ENST00000509900	SLITRK1	Q96PX8	696 aa		10.11	□□□□□ -0.79
PTPN20-223	ENST00000509900	INSM2	Q96T92	566 aa	Predicted RBP	10.11	□□□□□ -0.79
PTPN20-223	ENST00000509900	FUCA2	Q9BTY2	467 aa		10.11	□□□□□ -0.79
PTPN20-223	ENST00000509900	OSBPL2	Q9H1P3	480 aa		10.11	□□□□□ -0.79
PTPN20-223	ENST00000509900	CCSER2	Q9H7U1	834 aa		10.11	□□□□□ -0.79
PTPN20-223	ENST00000509900	ERVMER34-1	Q9H9K5	563 aa		10.11	□□□□□ -0.79
PTPN20-223	ENST00000509900	CRTAC1	Q9NQ79	661 aa		10.11	□□□□□ -0.79
PTPN20-223	ENST00000509900	AASDHPPT	Q9NRN7	309 aa		10.11	□□□□□ -0.79
PTPN20-223	ENST00000509900	TMPRSS4	Q9NRS4	437 aa		10.11	□□□□□ -0.79
PTPN20-223	ENST00000509900	TMEM30A	Q9NV96	361 aa		10.11	□□□□□ -0.79
PTPN20-223	ENST00000509900	EHD2	Q9NZN4	543 aa		10.11	□□□□□ -0.79
PTPN20-223	ENST00000509900	MAGEC2	Q9UBF1	373 aa	Predicted RBP	10.11	□□□□□ -0.79
PTPN20-223	ENST00000509900	SLC27A6	Q9Y2P4	619 aa		10.11	□□□□□ -0.79
PTPN20-223	ENST00000509900	SVIL	O95425	2214 aa		10.1	□□□□□ -0.79
PTPN20-223	ENST00000509900		A0A0B4J269	797 aa		10.1	□□□□□ -0.79
PTPN20-223	ENST00000509900	TLR4	O00206	839 aa		10.1	□□□□□ -0.79
PTPN20-223	ENST00000509900	CPLX1	O14810	134 aa		10.1	□□□□□ -0.79
PTPN20-223	ENST00000509900	HUS1	O60921	280 aa		10.1	□□□□□ -0.79
PTPN20-223	ENST00000509900	DTNB	O60941	627 aa		10.1	□□□□□ -0.79
PTPN20-223	ENST00000509900	AP1G2	O75843	785 aa		10.1	□□□□□ -0.79
PTPN20-223	ENST00000509900	ANXA13	P27216	316 aa		10.1	□□□□□ -0.79
PTPN20-223	ENST00000509900	COL8A1	P27658	744 aa		10.1	□□□□□ -0.79
PTPN20-223	ENST00000509900	PCSK1	P29120	753 aa		10.1	□□□□□ -0.79
PTPN20-223	ENST00000509900	DCT	P40126	519 aa		10.1	□□□□□ -0.79
PTPN20-223	ENST00000509900	PSMC1	P62191	440 aa	Known RBP	10.1	□□□□□ -0.79
PTPN20-223	ENST00000509900	KCNMA1	Q12791	1236 aa		10.1	□□□□□ -0.79
PTPN20-223	ENST00000509900	IFRD2	Q12894	506 aa	Predicted RBP	10.1	□□□□□ -0.79
PTPN20-223	ENST00000509900	TDRD10	Q5VZ19	366 aa	Known RBP	10.1	□□□□□ -0.79
PTPN20-223	ENST00000509900	C1orf186	Q6ZWK4	172 aa		10.1	□□□□□ -0.79
PTPN20-223	ENST00000509900	SRRM1	Q8IYB3	904 aa	Known RBP	10.1	□□□□□ -0.79
PTPN20-223	ENST00000509900	TMEM86A	Q8N2M4	240 aa		10.1	□□□□□ -0.79
PTPN20-223	ENST00000509900	SLC25A45	Q8N413	288 aa		10.1	□□□□□ -0.79
PTPN20-223	ENST00000509900	HTR3C	Q8WXA8	447 aa		10.1	□□□□□ -0.79
PTPN20-223	ENST00000509900	MIB2	Q96AX9	1013 aa		10.1	□□□□□ -0.79
PTPN20-223	ENST00000509900	BICD1	Q96G01	975 aa		10.1	□□□□□ -0.79
PTPN20-223	ENST00000509900	ZNF560	Q96MR9	790 aa		10.1	□□□□□ -0.79
PTPN20-223	ENST00000509900	JAKMIP1	Q96N16	626 aa	Known RBP	10.1	□□□□□ -0.79
PTPN20-223	ENST00000509900	ASB7	Q9H672	318 aa		10.1	□□□□□ -0.79
PTPN20-223	ENST00000509900	SGK2	Q9HBY8	427 aa		10.1	□□□□□ -0.79
PTPN20-223	ENST00000509900	KIAA1024	Q9UPX6	916 aa		10.1	□□□□□ -0.79
PTPN20-223	ENST00000509900	ENTPD2	Q9Y5L3	495 aa		10.1	□□□□□ -0.79
PTPN20-223	ENST00000509900	APC	P25054	2843 aa		10.1	□□□□□ -0.79
PTPN20-223	ENST00000509900		A1L4Q6	167 aa		10.09	□□□□□ -0.79
PTPN20-223	ENST00000509900	CDC14C	A4D256	554 aa		10.09	□□□□□ -0.79
PTPN20-223	ENST00000509900	FAM47DP	A6NHR8	397 aa		10.09	□□□□□ -0.79
PTPN20-223	ENST00000509900	C10orf142	B7Z368	130 aa		10.09	□□□□□ -0.79
PTPN20-223	ENST00000509900	AGFG2	O95081	481 aa		10.09	□□□□□ -0.79
PTPN20-223	ENST00000509900	TNFSF15	O95150	251 aa		10.09	□□□□□ -0.79
PTPN20-223	ENST00000509900	CKMT1A	P12532	417 aa		10.09	□□□□□ -0.79
PTPN20-223	ENST00000509900	RPS6KB1	P23443	525 aa		10.09	□□□□□ -0.79
PTPN20-223	ENST00000509900	LMO2	P25791	158 aa		10.09	□□□□□ -0.79
PTPN20-223	ENST00000509900	GRN	P28799	593 aa	Known RBP	10.09	□□□□□ -0.79
PTPN20-223	ENST00000509900	CCT6A	P40227	531 aa	Known RBP	10.09	□□□□□ -0.79
PTPN20-223	ENST00000509900	ACOT2	P49753	483 aa		10.09	□□□□□ -0.79
PTPN20-223	ENST00000509900	LIG4	P49917	911 aa		10.09	□□□□□ -0.79
PTPN20-223	ENST00000509900	CACNA2D1	P54289	1103 aa		10.09	□□□□□ -0.79
PTPN20-223	ENST00000509900	RPS14	P62263	151 aa	Known RBP	10.09	□□□□□ -0.79
PTPN20-223	ENST00000509900	CYP4F2	P78329	520 aa		10.09	□□□□□ -0.79
PTPN20-223	ENST00000509900	HECTD3	Q5T447	861 aa		10.09	□□□□□ -0.79
PTPN20-223	ENST00000509900	RINT1	Q6NUQ1	792 aa		10.09	□□□□□ -0.79
PTPN20-223	ENST00000509900	SLC39A4	Q6P5W5	647 aa		10.09	□□□□□ -0.79
PTPN20-223	ENST00000509900	FOXR1	Q6PIV2	292 aa		10.09	□□□□□ -0.79
PTPN20-223	ENST00000509900	BLOC1S2	Q6QNY1	142 aa		10.09	□□□□□ -0.79
PTPN20-223	ENST00000509900	SERPINA13P	Q6UXR4	307 aa		10.09	□□□□□ -0.79
PTPN20-223	ENST00000509900	TMC6	Q7Z403	805 aa		10.09	□□□□□ -0.79
PTPN20-223	ENST00000509900	ARL14	Q8N4G2	192 aa		10.09	□□□□□ -0.79
PTPN20-223	ENST00000509900	OXR1	Q8N573	874 aa		10.09	□□□□□ -0.79
PTPN20-223	ENST00000509900	UCMA	Q8WVF2	138 aa		10.09	□□□□□ -0.79
PTPN20-223	ENST00000509900	HPS3	Q969F9	1004 aa		10.09	□□□□□ -0.79
PTPN20-223	ENST00000509900	C8orf48	Q96LL4	319 aa		10.09	□□□□□ -0.79
PTPN20-223	ENST00000509900	SYT15	Q9BQS2	421 aa		10.09	□□□□□ -0.79
PTPN20-223	ENST00000509900	OCSTAMP	Q9BR26	566 aa		10.09	□□□□□ -0.79
PTPN20-223	ENST00000509900	MSTO1	Q9BUK6	570 aa		10.09	□□□□□ -0.79
PTPN20-223	ENST00000509900	ADNP	Q9H2P0	1102 aa		10.09	□□□□□ -0.79
PTPN20-223	ENST00000509900	DDX19A	Q9NUU7	478 aa	Known RBP	10.09	□□□□□ -0.79
PTPN20-223	ENST00000509900	ELOVL2	Q9NXB9	296 aa		10.09	□□□□□ -0.79
PTPN20-223	ENST00000509900	CHORDC1	Q9UHD1	332 aa	Predicted RBP	10.09	□□□□□ -0.79
PTPN20-223	ENST00000509900	ANAPC2	Q9UJX6	822 aa		10.09	□□□□□ -0.79
PTPN20-223	ENST00000509900	LY6G6E	A0A0G2JKS1	128 aa		10.08	□□□□□ -0.8
PTPN20-223	ENST00000509900	SLC35F4	A4IF30	521 aa		10.08	□□□□□ -0.8
PTPN20-223	ENST00000509900		E9PMD0	336 aa		10.08	□□□□□ -0.8
PTPN20-223	ENST00000509900	HNRNPDL	O14979	420 aa	Known RBP	10.08	□□□□□ -0.8
PTPN20-223	ENST00000509900	CENPB	P07199	599 aa	Predicted RBP	10.08	□□□□□ -0.8
PTPN20-223	ENST00000509900	GP1BA	P07359	652 aa		10.08	□□□□□ -0.8
PTPN20-223	ENST00000509900	PLS3	P13797	630 aa		10.08	□□□□□ -0.8
PTPN20-223	ENST00000509900	WT1	P19544	449 aa	Predicted RBP	10.08	□□□□□ -0.8
PTPN20-223	ENST00000509900	TGM2	P21980	687 aa		10.08	□□□□□ -0.8
PTPN20-223	ENST00000509900	POLR2B	P30876	1174 aa	Known RBP	10.08	□□□□□ -0.8
PTPN20-223	ENST00000509900	PNPLA4	P41247	253 aa		10.08	□□□□□ -0.8
PTPN20-223	ENST00000509900	LHX1	P48742	406 aa		10.08	□□□□□ -0.8
PTPN20-223	ENST00000509900	CD97	P48960	835 aa		10.08	□□□□□ -0.8
PTPN20-223	ENST00000509900	TUB	P50607	506 aa		10.08	□□□□□ -0.8
PTPN20-223	ENST00000509900	GALC	P54803	685 aa		10.08	□□□□□ -0.8
PTPN20-223	ENST00000509900	CYP27A1	Q02318	531 aa		10.08	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms