RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 TBX4P57082 545 aa16.02■□□□□ 0.16
TPM3-219ENST00000509409 SEMA3BQ13214 749 aa16.02■□□□□ 0.16
TPM3-219ENST00000509409 MORC3Q14149 939 aa16.02■□□□□ 0.16
TPM3-219ENST00000509409 NUGGCQ68CJ6 796 aa16.02■□□□□ 0.16
TPM3-219ENST00000509409 RFWD3Q6PCD5 774 aa16.02■□□□□ 0.16
TPM3-219ENST00000509409 FAM124AQ86V42 546 aa16.02■□□□□ 0.16
TPM3-219ENST00000509409 LMO3Q8TAP4 145 aa16.02■□□□□ 0.16
TPM3-219ENST00000509409 CLEC4CQ8WTT0 213 aa16.02■□□□□ 0.16
TPM3-219ENST00000509409 ZSWIM1Q9BR11 485 aa16.02■□□□□ 0.16
TPM3-219ENST00000509409 STIM2Q9P246 746 aa16.02■□□□□ 0.16
TPM3-219ENST00000509409 GGA2Q9UJY4 613 aa16.02■□□□□ 0.16
TPM3-219ENST00000509409 STOML2Q9UJZ1 356 aa16.02■□□□□ 0.16
TPM3-219ENST00000509409 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.02■□□□□ 0.16
TPM3-219ENST00000509409 CACNA1BQ00975 2339 aa16.02■□□□□ 0.15
TPM3-219ENST00000509409 EPG5Q9HCE0 2579 aa16.02■□□□□ 0.15
TPM3-219ENST00000509409 SPAARA0A1B0GVQ0 90 aa16.01■□□□□ 0.15
TPM3-219ENST00000509409 UPK3BL1B0FP48 263 aa16.01■□□□□ 0.15
TPM3-219ENST00000509409 UPK3BL2E5RIL1 263 aa16.01■□□□□ 0.15
TPM3-219ENST00000509409 ACSL4O60488 711 aa16.01■□□□□ 0.15
TPM3-219ENST00000509409 GADD45BO75293 160 aaPredicted RBP16.01■□□□□ 0.15
TPM3-219ENST00000509409 FGFR1OPO95684 399 aaKnown RBP16.01■□□□□ 0.15
TPM3-219ENST00000509409 TOP3BO95985 862 aaKnown RBP16.01■□□□□ 0.15
TPM3-219ENST00000509409 ATP5BP06576 529 aaKnown RBP16.01■□□□□ 0.15
TPM3-219ENST00000509409 PABPC1P11940 636 aaKnown RBP16.01■□□□□ 0.15
TPM3-219ENST00000509409 POLR2EP19388 210 aaKnown RBP16.01■□□□□ 0.15
TPM3-219ENST00000509409 BMP6P22004 513 aa16.01■□□□□ 0.15
TPM3-219ENST00000509409 COPAP53621 1224 aa16.01■□□□□ 0.15
TPM3-219ENST00000509409 SIM1P81133 766 aaPredicted RBP16.01■□□□□ 0.15
TPM3-219ENST00000509409 GCNT1Q02742 428 aa16.01■□□□□ 0.15
TPM3-219ENST00000509409 PAK1Q13153 545 aa16.01■□□□□ 0.15
TPM3-219ENST00000509409 DCAF12L1Q5VU92 463 aa16.01■□□□□ 0.15
TPM3-219ENST00000509409 MBLAC2Q68D91 279 aa16.01■□□□□ 0.15
TPM3-219ENST00000509409 MSANTD2Q6P1R3 559 aa16.01■□□□□ 0.15
TPM3-219ENST00000509409 PIP4P1Q86T03 277 aa16.01■□□□□ 0.15
TPM3-219ENST00000509409 CCDC117Q8IWD4 279 aaPredicted RBP16.01■□□□□ 0.15
TPM3-219ENST00000509409 CADM4Q8NFZ8 388 aa16.01■□□□□ 0.15
TPM3-219ENST00000509409 OR2T3Q8NH03 318 aa16.01■□□□□ 0.15
TPM3-219ENST00000509409 FAM149B1Q96BN6 582 aa16.01■□□□□ 0.15
TPM3-219ENST00000509409 DDX50Q9BQ39 737 aaKnown RBP16.01■□□□□ 0.15
TPM3-219ENST00000509409 INTS2Q9H0H0 1204 aaKnown RBP16.01■□□□□ 0.15
TPM3-219ENST00000509409 UBE2TQ9NPD8 197 aaPredicted RBP16.01■□□□□ 0.15
TPM3-219ENST00000509409 PCDHB9Q9Y5E1 797 aa16.01■□□□□ 0.15
TPM3-219ENST00000509409 A0A1B0GTW7 788 aa16■□□□□ 0.15
TPM3-219ENST00000509409 TYW5A2RUC4 315 aaKnown RBP16■□□□□ 0.15
TPM3-219ENST00000509409 CAPN9O14815 690 aa16■□□□□ 0.15
TPM3-219ENST00000509409 SGSHP51688 502 aa16■□□□□ 0.15
TPM3-219ENST00000509409 PIK3R6Q5UE93 754 aa16■□□□□ 0.15
TPM3-219ENST00000509409 TRIM59Q8IWR1 403 aa16■□□□□ 0.15
TPM3-219ENST00000509409 SCUBE3Q8IX30 993 aa16■□□□□ 0.15
TPM3-219ENST00000509409 AHI1Q8N157 1196 aa16■□□□□ 0.15
TPM3-219ENST00000509409 ZCCHC9Q8N567 271 aaKnown RBP16■□□□□ 0.15
TPM3-219ENST00000509409 ZNF366Q8N895 744 aa16■□□□□ 0.15
TPM3-219ENST00000509409 SCNM1Q9BWG6 230 aa16■□□□□ 0.15
TPM3-219ENST00000509409 LHX5Q9H2C1 402 aa16■□□□□ 0.15
TPM3-219ENST00000509409 DNAAF2Q9NVR5 837 aaKnown RBP16■□□□□ 0.15
TPM3-219ENST00000509409 SUN2Q9UH99 717 aa16■□□□□ 0.15
TPM3-219ENST00000509409 CHD8Q9HCK8 2581 aa16■□□□□ 0.15
TPM3-219ENST00000509409 METTL12A8MUP2 240 aa15.99■□□□□ 0.15
TPM3-219ENST00000509409 IRAK2O43187 625 aa15.99■□□□□ 0.15
TPM3-219ENST00000509409 MED7O43513 233 aa15.99■□□□□ 0.15
TPM3-219ENST00000509409 PROS1P07225 676 aa15.99■□□□□ 0.15
TPM3-219ENST00000509409 DLDP09622 509 aaKnown RBP15.99■□□□□ 0.15
TPM3-219ENST00000509409 ACADSBP45954 432 aa15.99■□□□□ 0.15
TPM3-219ENST00000509409 ST8SIA6P61647 398 aa15.99■□□□□ 0.15
TPM3-219ENST00000509409 RING1Q06587 406 aa15.99■□□□□ 0.15
TPM3-219ENST00000509409 MPP7Q5T2T1 576 aa15.99■□□□□ 0.15
TPM3-219ENST00000509409 DENND1BQ6P3S1 775 aa15.99■□□□□ 0.15
TPM3-219ENST00000509409 FOXR2Q6PJQ5 311 aa15.99■□□□□ 0.15
TPM3-219ENST00000509409 UNQ6494/PRO21346Q6UXR6 183 aa15.99■□□□□ 0.15
TPM3-219ENST00000509409 ADIPOR2Q86V24 386 aa15.99■□□□□ 0.15
TPM3-219ENST00000509409 MFN1Q8IWA4 741 aa15.99■□□□□ 0.15
TPM3-219ENST00000509409 ZNF557Q8N988 423 aaPredicted RBP15.99■□□□□ 0.15
TPM3-219ENST00000509409 DNASE2BQ8WZ79 361 aa15.99■□□□□ 0.15
TPM3-219ENST00000509409 SNX19Q92543 992 aa15.99■□□□□ 0.15
TPM3-219ENST00000509409 AZIN2Q96A70 460 aa15.99■□□□□ 0.15
TPM3-219ENST00000509409 KREMEN1Q96MU8 473 aa15.99■□□□□ 0.15
TPM3-219ENST00000509409 ZDHHC5Q9C0B5 715 aa15.99■□□□□ 0.15
TPM3-219ENST00000509409 NAALADL1Q9UQQ1 740 aa15.99■□□□□ 0.15
TPM3-219ENST00000509409 C1QTNF9BB2RNN3 333 aa15.98■□□□□ 0.15
TPM3-219ENST00000509409 BCAT2O15382 392 aaPredicted RBP15.98■□□□□ 0.15
TPM3-219ENST00000509409 SART1O43290 800 aaKnown RBP15.98■□□□□ 0.15
TPM3-219ENST00000509409 SH3BP5O60239 455 aa15.98■□□□□ 0.15
TPM3-219ENST00000509409 LETM1O95202 739 aaPredicted RBP15.98■□□□□ 0.15
TPM3-219ENST00000509409 MOCS2O96007 188 aaPredicted RBP15.98■□□□□ 0.15
TPM3-219ENST00000509409 IGLV3-27P01718 113 aa15.98■□□□□ 0.15
TPM3-219ENST00000509409 DNTTP04053 509 aa15.98■□□□□ 0.15
TPM3-219ENST00000509409 C1QTNF9P0C862 333 aa15.98■□□□□ 0.15
TPM3-219ENST00000509409 CD59P13987 128 aa15.98■□□□□ 0.15
TPM3-219ENST00000509409 SLC6A4P31645 630 aa15.98■□□□□ 0.15
TPM3-219ENST00000509409 CD70P32970 193 aa15.98■□□□□ 0.15
TPM3-219ENST00000509409 USP8P40818 1118 aa15.98■□□□□ 0.15
TPM3-219ENST00000509409 GPD2P43304 727 aa15.98■□□□□ 0.15
TPM3-219ENST00000509409 GRIK2Q13002 908 aa15.98■□□□□ 0.15
TPM3-219ENST00000509409 SLC14A1Q13336 389 aa15.98■□□□□ 0.15
TPM3-219ENST00000509409 CAMK2GQ13555 558 aaPredicted RBP15.98■□□□□ 0.15
TPM3-219ENST00000509409 HNRNPDQ14103 355 aaKnown RBP15.98■□□□□ 0.15
TPM3-219ENST00000509409 FAM133BQ5BKY9 247 aaKnown RBP15.98■□□□□ 0.15
TPM3-219ENST00000509409 KIAA0907Q7Z7F0 614 aaPredicted RBP15.98■□□□□ 0.15
TPM3-219ENST00000509409 CARNMT1Q8N4J0 409 aa15.98■□□□□ 0.15
TPM3-219ENST00000509409 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms