RNA–Protein interactions for RNA: ENST00000508848.5

POLR2J3-213, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 1,030 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-213ENST00000508848 HAPLN3Q96S86 360 aa11□□□□□ -0.65
POLR2J3-213ENST00000508848 PPP1R9BQ96SB3 815 aa11□□□□□ -0.65
POLR2J3-213ENST00000508848 PRMT1Q99873 361 aaKnown RBP11□□□□□ -0.65
POLR2J3-213ENST00000508848 NCAPGQ9BPX3 1015 aa11□□□□□ -0.65
POLR2J3-213ENST00000508848 HAUS4Q9H6D7 363 aa11□□□□□ -0.65
POLR2J3-213ENST00000508848 ARHGEF4Q9NR80 690 aa11□□□□□ -0.65
POLR2J3-213ENST00000508848 SPATA6Q9NWH7 488 aaPredicted RBP11□□□□□ -0.65
POLR2J3-213ENST00000508848 DDIT4Q9NX09 232 aa11□□□□□ -0.65
POLR2J3-213ENST00000508848 ARHGEF38Q9NXL2 777 aa11□□□□□ -0.65
POLR2J3-213ENST00000508848 PCDHGA2Q9Y5H1 932 aa11□□□□□ -0.65
POLR2J3-213ENST00000508848 CXorf51AA0A1B0GTR3 108 aa10.99□□□□□ -0.65
POLR2J3-213ENST00000508848 C2CD4BA6NLJ0 364 aa10.99□□□□□ -0.65
POLR2J3-213ENST00000508848 M0QYT0 321 aa10.99□□□□□ -0.65
POLR2J3-213ENST00000508848 MSI1O43347 362 aaKnown RBP10.99□□□□□ -0.65
POLR2J3-213ENST00000508848 EGFP01133 1207 aa10.99□□□□□ -0.65
POLR2J3-213ENST00000508848 GYPCP04921 128 aa10.99□□□□□ -0.65
POLR2J3-213ENST00000508848 HMBSP08397 361 aa10.99□□□□□ -0.65
POLR2J3-213ENST00000508848 SP9P0CG40 484 aa10.99□□□□□ -0.65
POLR2J3-213ENST00000508848 MYBL1P10243 752 aa10.99□□□□□ -0.65
POLR2J3-213ENST00000508848 HOXD9P28356 352 aaPredicted RBP10.99□□□□□ -0.65
POLR2J3-213ENST00000508848 SLC6A11P48066 632 aa10.99□□□□□ -0.65
POLR2J3-213ENST00000508848 DGKGP49619 791 aa10.99□□□□□ -0.65
POLR2J3-213ENST00000508848 VASPP50552 380 aaPredicted RBP10.99□□□□□ -0.65
POLR2J3-213ENST00000508848 AIF1P55008 147 aa10.99□□□□□ -0.65
POLR2J3-213ENST00000508848 ARID5AQ03989 594 aa10.99□□□□□ -0.65
POLR2J3-213ENST00000508848 DMC1Q14565 340 aa10.99□□□□□ -0.65
POLR2J3-213ENST00000508848 ACAP1Q15027 740 aa10.99□□□□□ -0.65
POLR2J3-213ENST00000508848 ZC3H12AQ5D1E8 599 aaKnown RBP10.99□□□□□ -0.65
POLR2J3-213ENST00000508848 MS4A13Q5J8X5 152 aa10.99□□□□□ -0.65
POLR2J3-213ENST00000508848 PPP1R15BQ5SWA1 713 aa10.99□□□□□ -0.65
POLR2J3-213ENST00000508848 FAM102AQ5T9C2 384 aaPredicted RBP10.99□□□□□ -0.65
POLR2J3-213ENST00000508848 GRAMD4Q6IC98 578 aa10.99□□□□□ -0.65
POLR2J3-213ENST00000508848 PLEKHA7Q6IQ23 1121 aa10.99□□□□□ -0.65
POLR2J3-213ENST00000508848 ZC3H14Q6PJT7 736 aaKnown RBP10.99□□□□□ -0.65
POLR2J3-213ENST00000508848 SND1Q7KZF4 910 aaKnown RBP eCLIP10.99□□□□□ -0.65
POLR2J3-213ENST00000508848 ZNF571Q7Z3V5 609 aaPredicted RBP10.99□□□□□ -0.65
POLR2J3-213ENST00000508848 VSTM4Q8IW00 320 aa10.99□□□□□ -0.65
POLR2J3-213ENST00000508848 KDM1BQ8NB78 822 aa10.99□□□□□ -0.65
POLR2J3-213ENST00000508848 OR8K1Q8NGG5 319 aa10.99□□□□□ -0.65
POLR2J3-213ENST00000508848 TTC8Q8TAM2 541 aa10.99□□□□□ -0.65
POLR2J3-213ENST00000508848 WFIKKN2Q8TEU8 576 aa10.99□□□□□ -0.65
POLR2J3-213ENST00000508848 DNAJC7Q99615 494 aa10.99□□□□□ -0.65
POLR2J3-213ENST00000508848 WDCPQ9H6R7 721 aa10.99□□□□□ -0.65
POLR2J3-213ENST00000508848 PARVAQ9NVD7 372 aa10.99□□□□□ -0.65
POLR2J3-213ENST00000508848 DNAJC17Q9NVM6 304 aaKnown RBP10.99□□□□□ -0.65
POLR2J3-213ENST00000508848 ZSCAN32Q9NX65 697 aa10.99□□□□□ -0.65
POLR2J3-213ENST00000508848 EBF1Q9UH73 591 aa10.99□□□□□ -0.65
POLR2J3-213ENST00000508848 CHD5Q8TDI0 1954 aa10.99□□□□□ -0.65
POLR2J3-213ENST00000508848 ZFHX2Q9C0A1 2572 aaPredicted RBP10.99□□□□□ -0.65
POLR2J3-213ENST00000508848 FAM186AA6NE01 2351 aa10.98□□□□□ -0.65
POLR2J3-213ENST00000508848 PLXND1Q9Y4D7 1925 aa10.98□□□□□ -0.65
POLR2J3-213ENST00000508848 SSU72P8A0A1W2PR75 194 aa10.98□□□□□ -0.65
POLR2J3-213ENST00000508848 TYW5A2RUC4 315 aaKnown RBP10.98□□□□□ -0.65
POLR2J3-213ENST00000508848 TBC1D3BA6NDS4 549 aa10.98□□□□□ -0.65
POLR2J3-213ENST00000508848 NEDD8-MDP1E9PL57 170 aa10.98□□□□□ -0.65
POLR2J3-213ENST00000508848 K7ESF4 209 aa10.98□□□□□ -0.65
POLR2J3-213ENST00000508848 DDX3XO00571 662 aaKnown RBP eCLIP10.98□□□□□ -0.65
POLR2J3-213ENST00000508848 LILRB5O75023 590 aa10.98□□□□□ -0.65
POLR2J3-213ENST00000508848 RNF40O75150 1001 aa10.98□□□□□ -0.65
POLR2J3-213ENST00000508848 TPM1P09493 284 aa10.98□□□□□ -0.65
POLR2J3-213ENST00000508848 FLT3P36888 993 aa10.98□□□□□ -0.65
POLR2J3-213ENST00000508848 ZNF143P52747 638 aaPredicted RBP10.98□□□□□ -0.65
POLR2J3-213ENST00000508848 PLK1P53350 603 aa10.98□□□□□ -0.65
POLR2J3-213ENST00000508848 NHLH1Q02575 133 aa10.98□□□□□ -0.65
POLR2J3-213ENST00000508848 TBX2Q13207 712 aaPredicted RBP10.98□□□□□ -0.65
POLR2J3-213ENST00000508848 EOGTQ5NDL2 527 aa10.98□□□□□ -0.65
POLR2J3-213ENST00000508848 NADSYN1Q6IA69 706 aa10.98□□□□□ -0.65
POLR2J3-213ENST00000508848 MMS22LQ6ZRQ5 1243 aa10.98□□□□□ -0.65
POLR2J3-213ENST00000508848 TPGS1Q6ZTW0 290 aa10.98□□□□□ -0.65
POLR2J3-213ENST00000508848 C12orf40Q86WS4 652 aa10.98□□□□□ -0.65
POLR2J3-213ENST00000508848 HJURPQ8NCD3 748 aaPredicted RBP10.98□□□□□ -0.65
POLR2J3-213ENST00000508848 TTC16Q8NEE8 873 aa10.98□□□□□ -0.65
POLR2J3-213ENST00000508848 DDI1Q8WTU0 396 aa10.98□□□□□ -0.65
POLR2J3-213ENST00000508848 MRFAP1L1Q96HT8 127 aa10.98□□□□□ -0.65
POLR2J3-213ENST00000508848 LMLNQ96KR4 655 aa10.98□□□□□ -0.65
POLR2J3-213ENST00000508848 OSBPL2Q9H1P3 480 aa10.98□□□□□ -0.65
POLR2J3-213ENST00000508848 MMP17Q9ULZ9 603 aa10.98□□□□□ -0.65
POLR2J3-213ENST00000508848 CKAP5Q14008 2032 aa10.97□□□□□ -0.65
POLR2J3-213ENST00000508848 IGLV3-10A0A075B6K4 115 aa10.97□□□□□ -0.65
POLR2J3-213ENST00000508848 ANKRD62A6NC57 917 aa10.97□□□□□ -0.65
POLR2J3-213ENST00000508848 DRGXA6NNA5 263 aa10.97□□□□□ -0.65
POLR2J3-213ENST00000508848 EIF3CLB5ME19 914 aaKnown RBP10.97□□□□□ -0.65
POLR2J3-213ENST00000508848 GRAP2O75791 330 aa10.97□□□□□ -0.65
POLR2J3-213ENST00000508848 FTLP02792 175 aaPredicted RBP10.97□□□□□ -0.65
POLR2J3-213ENST00000508848 PDGFRAP16234 1089 aa10.97□□□□□ -0.65
POLR2J3-213ENST00000508848 DESP17661 470 aa10.97□□□□□ -0.65
POLR2J3-213ENST00000508848 SDC4P31431 198 aa10.97□□□□□ -0.65
POLR2J3-213ENST00000508848 CASP14P31944 242 aa10.97□□□□□ -0.65
POLR2J3-213ENST00000508848 RDXP35241 583 aaKnown RBP10.97□□□□□ -0.65
POLR2J3-213ENST00000508848 RFC1P35251 1148 aaPredicted RBP10.97□□□□□ -0.65
POLR2J3-213ENST00000508848 DGKEP52429 567 aa10.97□□□□□ -0.65
POLR2J3-213ENST00000508848 PITX1P78337 314 aaPredicted RBP10.97□□□□□ -0.65
POLR2J3-213ENST00000508848 DEUP1Q05D60 604 aa10.97□□□□□ -0.65
POLR2J3-213ENST00000508848 SCAPQ12770 1279 aa10.97□□□□□ -0.65
POLR2J3-213ENST00000508848 TSR1Q2NL82 804 aaKnown RBP10.97□□□□□ -0.65
POLR2J3-213ENST00000508848 OTUD1Q5VV17 481 aaPredicted RBP10.97□□□□□ -0.65
POLR2J3-213ENST00000508848 E4F1Q66K89 784 aaPredicted RBP10.97□□□□□ -0.65
POLR2J3-213ENST00000508848 WDR59Q6PJI9 974 aa10.97□□□□□ -0.65
POLR2J3-213ENST00000508848 IL17RCQ8NAC3 791 aa10.97□□□□□ -0.65
POLR2J3-213ENST00000508848 UCMAQ8WVF2 138 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms