RNA–Protein interactions for RNA: ENST00000508321.1

HTT-204, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 386 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-204ENST00000508321 LRRC3BQ96PB8 259 aa10.62□□□□□ -0.71
HTT-204ENST00000508321 ALS2CR12Q96Q35 445 aa10.62□□□□□ -0.71
HTT-204ENST00000508321 UHRF1Q96T88 793 aaPredicted RBP10.62□□□□□ -0.71
HTT-204ENST00000508321 CALCOCO1Q9P1Z2 691 aa10.62□□□□□ -0.71
HTT-204ENST00000508321 PPP2R2CQ9Y2T4 447 aa10.62□□□□□ -0.71
HTT-204ENST00000508321 WNT6Q9Y6F9 365 aa10.62□□□□□ -0.71
HTT-204ENST00000508321 RCCD1A6NED2 376 aa10.61□□□□□ -0.71
HTT-204ENST00000508321 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.61□□□□□ -0.71
HTT-204ENST00000508321 PSTPIP1O43586 416 aa10.61□□□□□ -0.71
HTT-204ENST00000508321 PAGE1O75459 146 aa10.61□□□□□ -0.71
HTT-204ENST00000508321 CYP17A1P05093 508 aa10.61□□□□□ -0.71
HTT-204ENST00000508321 ADH5P11766 374 aa10.61□□□□□ -0.71
HTT-204ENST00000508321 MIPP30301 263 aa10.61□□□□□ -0.71
HTT-204ENST00000508321 ADRA1BP35368 520 aa10.61□□□□□ -0.71
HTT-204ENST00000508321 NAP1L1P55209 391 aaKnown RBP10.61□□□□□ -0.71
HTT-204ENST00000508321 SLC25A11Q02978 314 aaKnown RBP10.61□□□□□ -0.71
HTT-204ENST00000508321 GAD2Q05329 585 aa10.61□□□□□ -0.71
HTT-204ENST00000508321 RUNX3Q13761 415 aa10.61□□□□□ -0.71
HTT-204ENST00000508321 C5orf22Q49AR2 442 aa10.61□□□□□ -0.71
HTT-204ENST00000508321 MPPE1Q53F39 396 aa10.61□□□□□ -0.71
HTT-204ENST00000508321 BOLA3Q53S33 107 aa10.61□□□□□ -0.71
HTT-204ENST00000508321 HS1BP3Q53T59 392 aa10.61□□□□□ -0.71
HTT-204ENST00000508321 FAM133BQ5BKY9 247 aaKnown RBP10.61□□□□□ -0.71
HTT-204ENST00000508321 MS4A13Q5J8X5 152 aa10.61□□□□□ -0.71
HTT-204ENST00000508321 PIK3R6Q5UE93 754 aa10.61□□□□□ -0.71
HTT-204ENST00000508321 LRRC38Q5VT99 294 aa10.61□□□□□ -0.71
HTT-204ENST00000508321 LRRC31Q6UY01 552 aa10.61□□□□□ -0.71
HTT-204ENST00000508321 VSIG1Q86XK7 387 aa10.61□□□□□ -0.71
HTT-204ENST00000508321 RSAD2Q8WXG1 361 aa10.61□□□□□ -0.71
HTT-204ENST00000508321 ASIC4Q96FT7 647 aa10.61□□□□□ -0.71
HTT-204ENST00000508321 EPAS1Q99814 870 aa10.61□□□□□ -0.71
HTT-204ENST00000508321 PRMT1Q99873 361 aaKnown RBP10.61□□□□□ -0.71
HTT-204ENST00000508321 PLA2G2FQ9BZM2 168 aa10.61□□□□□ -0.71
HTT-204ENST00000508321 TRIM7Q9C029 511 aa10.61□□□□□ -0.71
HTT-204ENST00000508321 LACRTQ9GZZ8 138 aa10.61□□□□□ -0.71
HTT-204ENST00000508321 OSBPL2Q9H1P3 480 aa10.61□□□□□ -0.71
HTT-204ENST00000508321 C8orf33Q9H7E9 229 aaPredicted RBP10.61□□□□□ -0.71
HTT-204ENST00000508321 ECT2Q9H8V3 914 aa10.61□□□□□ -0.71
HTT-204ENST00000508321 SPHK2Q9NRA0 654 aa10.61□□□□□ -0.71
HTT-204ENST00000508321 DONSONQ9NYP3 566 aa10.61□□□□□ -0.71
HTT-204ENST00000508321 USP18Q9UMW8 372 aa10.61□□□□□ -0.71
HTT-204ENST00000508321 MIA3Q5JRA6 1907 aa10.6□□□□□ -0.71
HTT-204ENST00000508321 IGLV3-10A0A075B6K4 115 aa10.6□□□□□ -0.71
HTT-204ENST00000508321 A0A1B0GVM2 712 aa10.6□□□□□ -0.71
HTT-204ENST00000508321 TCAF2A6NFQ2 919 aa10.6□□□□□ -0.71
HTT-204ENST00000508321 GFRA2O00451 464 aa10.6□□□□□ -0.71
HTT-204ENST00000508321 FGF10O15520 208 aaPredicted RBP10.6□□□□□ -0.71
HTT-204ENST00000508321 SPOPO43791 374 aa10.6□□□□□ -0.71
HTT-204ENST00000508321 CACNG3O60359 315 aa10.6□□□□□ -0.71
HTT-204ENST00000508321 BUB1BO60566 1050 aaPredicted RBP10.6□□□□□ -0.71
HTT-204ENST00000508321 PENKP01210 267 aaPredicted RBP10.6□□□□□ -0.71
HTT-204ENST00000508321 TACR2P21452 398 aa10.6□□□□□ -0.71
HTT-204ENST00000508321 MSNP26038 577 aaKnown RBP10.6□□□□□ -0.71
HTT-204ENST00000508321 L1CAMP32004 1257 aa10.6□□□□□ -0.71
HTT-204ENST00000508321 ATXN1P54253 815 aaKnown RBP10.6□□□□□ -0.71
HTT-204ENST00000508321 OXCT1P55809 520 aa10.6□□□□□ -0.71
HTT-204ENST00000508321 PRKCQQ04759 706 aa10.6□□□□□ -0.71
HTT-204ENST00000508321 MESDQ14696 234 aa10.6□□□□□ -0.71
HTT-204ENST00000508321 DHCR24Q15392 516 aa10.6□□□□□ -0.71
HTT-204ENST00000508321 DPYSL2Q16555 572 aa10.6□□□□□ -0.71
HTT-204ENST00000508321 ERMARDQ5T6L9 678 aa10.6□□□□□ -0.71
HTT-204ENST00000508321 SH3PXD2AQ5TCZ1 1133 aa10.6□□□□□ -0.71
HTT-204ENST00000508321 RNF43Q68DV7 783 aa10.6□□□□□ -0.71
HTT-204ENST00000508321 NADSYN1Q6IA69 706 aa10.6□□□□□ -0.71
HTT-204ENST00000508321 SCYL2Q6P3W7 929 aa10.6□□□□□ -0.71
HTT-204ENST00000508321 CHST9Q7L1S5 443 aa10.6□□□□□ -0.71
HTT-204ENST00000508321 DAAM2Q86T65 1068 aa10.6□□□□□ -0.71
HTT-204ENST00000508321 RALGPS2Q86X27 583 aaPredicted RBP10.6□□□□□ -0.71
HTT-204ENST00000508321 CCDC117Q8IWD4 279 aaPredicted RBP10.6□□□□□ -0.71
HTT-204ENST00000508321 CCDC185Q8N715 623 aa10.6□□□□□ -0.71
HTT-204ENST00000508321 TPCN2Q8NHX9 752 aa10.6□□□□□ -0.71
HTT-204ENST00000508321 SHDQ96IW2 340 aa10.6□□□□□ -0.71
HTT-204ENST00000508321 XPO6Q96QU8 1125 aaKnown RBP10.6□□□□□ -0.71
HTT-204ENST00000508321 RPP25Q9BUL9 199 aaKnown RBP10.6□□□□□ -0.71
HTT-204ENST00000508321 SLC2A11Q9BYW1 496 aa10.6□□□□□ -0.71
HTT-204ENST00000508321 EBF3Q9H4W6 596 aa10.6□□□□□ -0.71
HTT-204ENST00000508321 HPS4Q9NQG7 708 aa10.6□□□□□ -0.71
HTT-204ENST00000508321 RCOR3Q9P2K3 495 aaPredicted RBP10.6□□□□□ -0.71
HTT-204ENST00000508321 PPARGC1AQ9UBK2 798 aaKnown RBP10.6□□□□□ -0.71
HTT-204ENST00000508321 WNT16Q9UBV4 365 aa10.6□□□□□ -0.71
HTT-204ENST00000508321 FZD10Q9ULW2 581 aa10.6□□□□□ -0.71
HTT-204ENST00000508321 AP4E1Q9UPM8 1137 aa10.6□□□□□ -0.71
HTT-204ENST00000508321 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.6□□□□□ -0.71
HTT-204ENST00000508321 HS3ST4Q9Y661 456 aa10.6□□□□□ -0.71
HTT-204ENST00000508321 BDP1A6H8Y1 2624 aa10.59□□□□□ -0.71
HTT-204ENST00000508321 MACROD2A1Z1Q3 448 aa10.59□□□□□ -0.71
HTT-204ENST00000508321 MIF4GDA9UHW6 222 aaKnown RBP10.59□□□□□ -0.71
HTT-204ENST00000508321 ZNF487B1APH4 448 aa10.59□□□□□ -0.71
HTT-204ENST00000508321 DCXO43602 365 aa10.59□□□□□ -0.71
HTT-204ENST00000508321 ALADP13716 330 aa10.59□□□□□ -0.71
HTT-204ENST00000508321 ARSAP15289 507 aa10.59□□□□□ -0.71
HTT-204ENST00000508321 HOXC13P31276 330 aa10.59□□□□□ -0.71
HTT-204ENST00000508321 SLC6A4P31645 630 aa10.59□□□□□ -0.71
HTT-204ENST00000508321 CTHP32929 405 aa10.59□□□□□ -0.71
HTT-204ENST00000508321 SEMA3BQ13214 749 aa10.59□□□□□ -0.71
HTT-204ENST00000508321 AUHQ13825 339 aaKnown RBP10.59□□□□□ -0.71
HTT-204ENST00000508321 PDK2Q15119 407 aa10.59□□□□□ -0.71
HTT-204ENST00000508321 E2F5Q15329 346 aa10.59□□□□□ -0.71
HTT-204ENST00000508321 LY6G5CQ5SRR4 150 aa10.59□□□□□ -0.71
HTT-204ENST00000508321 MANEALQ5VSG8 457 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms