RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 DNASE2BQ8WZ79 361 aa12.03□□□□□ -0.48
HMGCS1-204ENST00000507293 GATA6Q92908 595 aa12.03□□□□□ -0.48
HMGCS1-204ENST00000507293 DHTKD1Q96HY7 919 aaPredicted RBP12.03□□□□□ -0.48
HMGCS1-204ENST00000507293 MIR1-1HGQ9H1L0 117 aa12.03□□□□□ -0.48
HMGCS1-204ENST00000507293 ABCB8Q9NUT2 735 aa12.03□□□□□ -0.48
HMGCS1-204ENST00000507293 ZMIZ1Q9ULJ6 1067 aa12.03□□□□□ -0.48
HMGCS1-204ENST00000507293 GOLGA6L7A0A1B0GV03 622 aa12.02□□□□□ -0.49
HMGCS1-204ENST00000507293 GJB3O75712 270 aa12.02□□□□□ -0.49
HMGCS1-204ENST00000507293 IGLV3-27P01718 113 aa12.02□□□□□ -0.49
HMGCS1-204ENST00000507293 PABPC1P11940 636 aaKnown RBP12.02□□□□□ -0.49
HMGCS1-204ENST00000507293 OXTRP30559 389 aa12.02□□□□□ -0.49
HMGCS1-204ENST00000507293 NUCB2P80303 420 aa12.02□□□□□ -0.49
HMGCS1-204ENST00000507293 CAMK2GQ13555 558 aaPredicted RBP12.02□□□□□ -0.49
HMGCS1-204ENST00000507293 CNGA2Q16280 664 aa12.02□□□□□ -0.49
HMGCS1-204ENST00000507293 KLHL10Q6JEL2 608 aa12.02□□□□□ -0.49
HMGCS1-204ENST00000507293 TTI2Q6NXR4 508 aa12.02□□□□□ -0.49
HMGCS1-204ENST00000507293 PMF1Q6P1K2 205 aa12.02□□□□□ -0.49
HMGCS1-204ENST00000507293 RFWD3Q6PCD5 774 aa12.02□□□□□ -0.49
HMGCS1-204ENST00000507293 FAM124AQ86V42 546 aa12.02□□□□□ -0.49
HMGCS1-204ENST00000507293 ARHGEF19Q8IW93 802 aa12.02□□□□□ -0.49
HMGCS1-204ENST00000507293 AHI1Q8N157 1196 aa12.02□□□□□ -0.49
HMGCS1-204ENST00000507293 ZNF366Q8N895 744 aa12.02□□□□□ -0.49
HMGCS1-204ENST00000507293 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.02□□□□□ -0.49
HMGCS1-204ENST00000507293 KDF1Q8NAX2 398 aaPredicted RBP12.02□□□□□ -0.49
HMGCS1-204ENST00000507293 OR2T3Q8NH03 318 aa12.02□□□□□ -0.49
HMGCS1-204ENST00000507293 WFDC5Q8TCV5 224 aa12.02□□□□□ -0.49
HMGCS1-204ENST00000507293 CLEC4CQ8WTT0 213 aa12.02□□□□□ -0.49
HMGCS1-204ENST00000507293 SLC35F5Q8WV83 523 aa12.02□□□□□ -0.49
HMGCS1-204ENST00000507293 IRGQQ8WZA9 623 aa12.02□□□□□ -0.49
HMGCS1-204ENST00000507293 TMA16Q96EY4 203 aaKnown RBP12.02□□□□□ -0.49
HMGCS1-204ENST00000507293 CAMK1GQ96NX5 476 aa12.02□□□□□ -0.49
HMGCS1-204ENST00000507293 NUP58Q9BVL2 599 aa12.02□□□□□ -0.49
HMGCS1-204ENST00000507293 LHX5Q9H2C1 402 aa12.02□□□□□ -0.49
HMGCS1-204ENST00000507293 TMEM245Q9H330 911 aa12.02□□□□□ -0.49
HMGCS1-204ENST00000507293 GGA2Q9UJY4 613 aa12.02□□□□□ -0.49
HMGCS1-204ENST00000507293 KLK13Q9UKR3 277 aa12.02□□□□□ -0.49
HMGCS1-204ENST00000507293 CTNND2Q9UQB3 1225 aa12.02□□□□□ -0.49
HMGCS1-204ENST00000507293 NEUROG3Q9Y4Z2 214 aa12.02□□□□□ -0.49
HMGCS1-204ENST00000507293 PLXNA2O75051 1894 aa12.02□□□□□ -0.49
HMGCS1-204ENST00000507293 METTL12A8MUP2 240 aa12.01□□□□□ -0.49
HMGCS1-204ENST00000507293 PMM2O15305 246 aa12.01□□□□□ -0.49
HMGCS1-204ENST00000507293 BCAT2O15382 392 aaPredicted RBP12.01□□□□□ -0.49
HMGCS1-204ENST00000507293 SH3BP5O60239 455 aa12.01□□□□□ -0.49
HMGCS1-204ENST00000507293 TBL1XO60907 577 aa12.01□□□□□ -0.49
HMGCS1-204ENST00000507293 LTFP02788 710 aa12.01□□□□□ -0.49
HMGCS1-204ENST00000507293 SLC6A4P31645 630 aa12.01□□□□□ -0.49
HMGCS1-204ENST00000507293 PPP1R2P41236 205 aa12.01□□□□□ -0.49
HMGCS1-204ENST00000507293 SLC11A2P49281 568 aa12.01□□□□□ -0.49
HMGCS1-204ENST00000507293 CETN1Q12798 172 aa12.01□□□□□ -0.49
HMGCS1-204ENST00000507293 SLC14A1Q13336 389 aa12.01□□□□□ -0.49
HMGCS1-204ENST00000507293 HNRNPDQ14103 355 aaKnown RBP12.01□□□□□ -0.49
HMGCS1-204ENST00000507293 BECN1Q14457 450 aa12.01□□□□□ -0.49
HMGCS1-204ENST00000507293 STILQ15468 1287 aa12.01□□□□□ -0.49
HMGCS1-204ENST00000507293 PTPRNQ16849 979 aa12.01□□□□□ -0.49
HMGCS1-204ENST00000507293 PIK3R6Q5UE93 754 aa12.01□□□□□ -0.49
HMGCS1-204ENST00000507293 NUGGCQ68CJ6 796 aa12.01□□□□□ -0.49
HMGCS1-204ENST00000507293 MBLAC2Q68D91 279 aa12.01□□□□□ -0.49
HMGCS1-204ENST00000507293 RRAGAQ7L523 313 aa12.01□□□□□ -0.49
HMGCS1-204ENST00000507293 KIAA0907Q7Z7F0 614 aaPredicted RBP12.01□□□□□ -0.49
HMGCS1-204ENST00000507293 ADIPOR2Q86V24 386 aa12.01□□□□□ -0.49
HMGCS1-204ENST00000507293 NAXDQ8IW45 347 aa12.01□□□□□ -0.49
HMGCS1-204ENST00000507293 LMO3Q8TAP4 145 aa12.01□□□□□ -0.49
HMGCS1-204ENST00000507293 NELFBQ8WX92 580 aa12.01□□□□□ -0.49
HMGCS1-204ENST00000507293 GOLGA1Q92805 767 aa12.01□□□□□ -0.49
HMGCS1-204ENST00000507293 HSFY1Q96LI6 401 aa12.01□□□□□ -0.49
HMGCS1-204ENST00000507293 ZDHHC5Q9C0B5 715 aa12.01□□□□□ -0.49
HMGCS1-204ENST00000507293 MIS12Q9H081 205 aa12.01□□□□□ -0.49
HMGCS1-204ENST00000507293 EIF2B4Q9UI10 523 aaKnown RBP12.01□□□□□ -0.49
HMGCS1-204ENST00000507293 PLA2G4CQ9UP65 541 aa12.01□□□□□ -0.49
HMGCS1-204ENST00000507293 NFE2L3Q9Y4A8 694 aa12.01□□□□□ -0.49
HMGCS1-204ENST00000507293 CEP295Q9C0D2 2601 aa12.01□□□□□ -0.49
HMGCS1-204ENST00000507293 PTPRBP23467 1997 aa12□□□□□ -0.49
HMGCS1-204ENST00000507293 TMEM8BA6NDV4 472 aa12□□□□□ -0.49
HMGCS1-204ENST00000507293 PPP1R3GB7ZBB8 358 aa12□□□□□ -0.49
HMGCS1-204ENST00000507293 P4HA2O15460 535 aa12□□□□□ -0.49
HMGCS1-204ENST00000507293 ACSL4O60488 711 aa12□□□□□ -0.49
HMGCS1-204ENST00000507293 BMP6P22004 513 aa12□□□□□ -0.49
HMGCS1-204ENST00000507293 CD70P32970 193 aa12□□□□□ -0.49
HMGCS1-204ENST00000507293 RDXP35241 583 aaKnown RBP12□□□□□ -0.49
HMGCS1-204ENST00000507293 TBX4P57082 545 aa12□□□□□ -0.49
HMGCS1-204ENST00000507293 RING1Q06587 406 aa12□□□□□ -0.49
HMGCS1-204ENST00000507293 FAM133BQ5BKY9 247 aaKnown RBP12□□□□□ -0.49
HMGCS1-204ENST00000507293 NADSYN1Q6IA69 706 aa12□□□□□ -0.49
HMGCS1-204ENST00000507293 UNC45BQ8IWX7 931 aa12□□□□□ -0.49
HMGCS1-204ENST00000507293 ELOA2Q8IYF1 753 aaPredicted RBP12□□□□□ -0.49
HMGCS1-204ENST00000507293 ZCCHC14Q8WYQ9 949 aaKnown RBP12□□□□□ -0.49
HMGCS1-204ENST00000507293 SNX19Q92543 992 aa12□□□□□ -0.49
HMGCS1-204ENST00000507293 FCRL2Q96LA5 508 aaPredicted RBP12□□□□□ -0.49
HMGCS1-204ENST00000507293 PRICKLE1Q96MT3 831 aaPredicted RBP12□□□□□ -0.49
HMGCS1-204ENST00000507293 KREMEN1Q96MU8 473 aa12□□□□□ -0.49
HMGCS1-204ENST00000507293 C6orf106Q9H6K1 298 aaPredicted RBP12□□□□□ -0.49
HMGCS1-204ENST00000507293 IL21RQ9HBE5 538 aa12□□□□□ -0.49
HMGCS1-204ENST00000507293 PRSS16Q9NQE7 514 aa12□□□□□ -0.49
HMGCS1-204ENST00000507293 STIM2Q9P246 746 aa12□□□□□ -0.49
HMGCS1-204ENST00000507293 MSRB2Q9Y3D2 182 aa12□□□□□ -0.49
HMGCS1-204ENST00000507293 BICDL2A1A5D9 508 aa11.99□□□□□ -0.49
HMGCS1-204ENST00000507293 H0Y626 953 aa11.99□□□□□ -0.49
HMGCS1-204ENST00000507293 BIN1O00499 593 aa11.99□□□□□ -0.49
HMGCS1-204ENST00000507293 IRAK2O43187 625 aa11.99□□□□□ -0.49
HMGCS1-204ENST00000507293 FBXO21O94952 628 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms