RNA–Protein interactions for RNA: ENST00000507215.5

NR1I3-224, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 620 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-224ENST00000507215 LMAN2Q12907 356 aa7.29□□□□□ -1.24
NR1I3-224ENST00000507215 HNRNPDQ14103 355 aaKnown RBP7.29□□□□□ -1.24
NR1I3-224ENST00000507215 CTTNQ14247 550 aaKnown RBP7.29□□□□□ -1.24
NR1I3-224ENST00000507215 SF3A2Q15428 464 aaKnown RBP7.29□□□□□ -1.24
NR1I3-224ENST00000507215 ZNF124Q15973 351 aa7.29□□□□□ -1.24
NR1I3-224ENST00000507215 ITPRIPL2Q3MIP1 535 aa7.29□□□□□ -1.24
NR1I3-224ENST00000507215 XKR4Q5GH76 650 aa7.29□□□□□ -1.24
NR1I3-224ENST00000507215 TMC6Q7Z403 805 aa7.29□□□□□ -1.24
NR1I3-224ENST00000507215 BEST2Q8NFU1 509 aa7.29□□□□□ -1.24
NR1I3-224ENST00000507215 USP33Q8TEY7 942 aa7.29□□□□□ -1.24
NR1I3-224ENST00000507215 RABGGTAQ92696 567 aa7.29□□□□□ -1.24
NR1I3-224ENST00000507215 ZNF274Q96GC6 653 aaPredicted RBP7.29□□□□□ -1.24
NR1I3-224ENST00000507215 FAM84AQ96KN4 292 aa7.29□□□□□ -1.24
NR1I3-224ENST00000507215 JAKMIP1Q96N16 626 aaKnown RBP7.29□□□□□ -1.24
NR1I3-224ENST00000507215 GCNAQ96QF7 691 aa7.29□□□□□ -1.24
NR1I3-224ENST00000507215 TMEM209Q96SK2 561 aa7.29□□□□□ -1.24
NR1I3-224ENST00000507215 SLC32A1Q9H598 525 aa7.29□□□□□ -1.24
NR1I3-224ENST00000507215 TUFT1Q9NNX1 390 aa7.29□□□□□ -1.24
NR1I3-224ENST00000507215 TMEM9BQ9NQ34 198 aa7.29□□□□□ -1.24
NR1I3-224ENST00000507215 FBXL5Q9UKA1 691 aa7.29□□□□□ -1.24
NR1I3-224ENST00000507215 STK36Q9NRP7 1315 aa7.28□□□□□ -1.24
NR1I3-224ENST00000507215 NUP210Q8TEM1 1887 aaPredicted RBP7.28□□□□□ -1.24
NR1I3-224ENST00000507215 SMIM28A0A1B0GU29 152 aa7.28□□□□□ -1.24
NR1I3-224ENST00000507215 OR6C75A6NL08 312 aa7.28□□□□□ -1.24
NR1I3-224ENST00000507215 SRRM3A6NNA2 597 aaPredicted RBP7.28□□□□□ -1.24
NR1I3-224ENST00000507215 HRKO00198 91 aa7.28□□□□□ -1.24
NR1I3-224ENST00000507215 ETV2O00321 342 aaPredicted RBP7.28□□□□□ -1.24
NR1I3-224ENST00000507215 USO1O60763 962 aaKnown RBP7.28□□□□□ -1.24
NR1I3-224ENST00000507215 APBB3O95704 486 aa7.28□□□□□ -1.24
NR1I3-224ENST00000507215 CAVIN2O95810 425 aa7.28□□□□□ -1.24
NR1I3-224ENST00000507215 C1QTNF9P0C862 333 aa7.28□□□□□ -1.24
NR1I3-224ENST00000507215 MYL4P12829 197 aa7.28□□□□□ -1.24
NR1I3-224ENST00000507215 KCNE1P15382 129 aa7.28□□□□□ -1.24
NR1I3-224ENST00000507215 DDX6P26196 483 aaKnown RBP eCLIP7.28□□□□□ -1.24
NR1I3-224ENST00000507215 CDC25CP30307 473 aa7.28□□□□□ -1.24
NR1I3-224ENST00000507215 HSPA4P34932 840 aa7.28□□□□□ -1.24
NR1I3-224ENST00000507215 HOXD12P35452 270 aa7.28□□□□□ -1.24
NR1I3-224ENST00000507215 VIPR2P41587 438 aa7.28□□□□□ -1.24
NR1I3-224ENST00000507215 CCR2P41597 374 aa7.28□□□□□ -1.24
NR1I3-224ENST00000507215 MAPKAPK2P49137 400 aa7.28□□□□□ -1.24
NR1I3-224ENST00000507215 MCM2P49736 904 aa7.28□□□□□ -1.24
NR1I3-224ENST00000507215 SUMO1P63165 101 aaKnown RBP7.28□□□□□ -1.24
NR1I3-224ENST00000507215 SMARCB1Q12824 385 aa7.28□□□□□ -1.24
NR1I3-224ENST00000507215 SRSF5Q13243 272 aaKnown RBP7.28□□□□□ -1.24
NR1I3-224ENST00000507215 NR1I3Q14994 352 aa7.28□□□□□ -1.24
NR1I3-224ENST00000507215 TEAD2Q15562 447 aa7.28□□□□□ -1.24
NR1I3-224ENST00000507215 NPY5RQ15761 445 aa7.28□□□□□ -1.24
NR1I3-224ENST00000507215 CALCRLQ16602 461 aa7.28□□□□□ -1.24
NR1I3-224ENST00000507215 PLK5Q496M5 336 aa7.28□□□□□ -1.24
NR1I3-224ENST00000507215 ATF7IP2Q5U623 682 aa7.28□□□□□ -1.24
NR1I3-224ENST00000507215 LMBRD2Q68DH5 695 aaPredicted RBP7.28□□□□□ -1.24
NR1I3-224ENST00000507215 Q6ZS52 159 aa7.28□□□□□ -1.24
NR1I3-224ENST00000507215 KBTBD6Q86V97 674 aa7.28□□□□□ -1.24
NR1I3-224ENST00000507215 CDR2LQ86X02 465 aaPredicted RBP7.28□□□□□ -1.24
NR1I3-224ENST00000507215 NOSTRINQ8IVI9 506 aa7.28□□□□□ -1.24
NR1I3-224ENST00000507215 ERMNQ8TAM6 284 aa7.28□□□□□ -1.24
NR1I3-224ENST00000507215 BPIFB1Q8TDL5 484 aa7.28□□□□□ -1.24
NR1I3-224ENST00000507215 ZCCHC14Q8WYQ9 949 aaKnown RBP7.28□□□□□ -1.24
NR1I3-224ENST00000507215 KIFAP3Q92845 792 aa7.28□□□□□ -1.24
NR1I3-224ENST00000507215 TCEAL4Q96EI5 215 aa7.28□□□□□ -1.24
NR1I3-224ENST00000507215 TRMT2BQ96GJ1 504 aaKnown RBP7.28□□□□□ -1.24
NR1I3-224ENST00000507215 ZSWIM3Q96MP5 696 aa7.28□□□□□ -1.24
NR1I3-224ENST00000507215 TSPAN18Q96SJ8 248 aa7.28□□□□□ -1.24
NR1I3-224ENST00000507215 JAM3Q9BX67 310 aa7.28□□□□□ -1.24
NR1I3-224ENST00000507215 TTC12Q9H892 705 aaPredicted RBP7.28□□□□□ -1.24
NR1I3-224ENST00000507215 KIF9Q9HAQ2 790 aa7.28□□□□□ -1.24
NR1I3-224ENST00000507215 WASF3Q9UPY6 502 aa7.28□□□□□ -1.24
NR1I3-224ENST00000507215 TNFSF13BQ9Y275 285 aa7.28□□□□□ -1.24
NR1I3-224ENST00000507215 GDAQ9Y2T3 454 aa7.28□□□□□ -1.24
NR1I3-224ENST00000507215 DMXL2Q8TDJ6 3036 aa7.27□□□□□ -1.24
NR1I3-224ENST00000507215 FLNBO75369 2602 aaKnown RBP7.27□□□□□ -1.25
NR1I3-224ENST00000507215 TEX51A0A1B0GUA7 166 aa7.27□□□□□ -1.25
NR1I3-224ENST00000507215 BCLAF3A2AJT9 711 aaKnown RBP7.27□□□□□ -1.25
NR1I3-224ENST00000507215 TRDMT1O14717 391 aaKnown RBP7.27□□□□□ -1.25
NR1I3-224ENST00000507215 XPOTO43592 962 aaKnown RBP7.27□□□□□ -1.25
NR1I3-224ENST00000507215 CDC45O75419 566 aa7.27□□□□□ -1.25
NR1I3-224ENST00000507215 MOSPD3O75425 235 aa7.27□□□□□ -1.25
NR1I3-224ENST00000507215 REC8O95072 547 aa7.27□□□□□ -1.25
NR1I3-224ENST00000507215 OAZ2O95190 189 aa7.27□□□□□ -1.25
NR1I3-224ENST00000507215 SEC24AO95486 1093 aa7.27□□□□□ -1.25
NR1I3-224ENST00000507215 CYP11B2P19099 503 aa7.27□□□□□ -1.25
NR1I3-224ENST00000507215 CDR1P51861 262 aa7.27□□□□□ -1.25
NR1I3-224ENST00000507215 NCKAP1LP55160 1127 aa7.27□□□□□ -1.25
NR1I3-224ENST00000507215 ARPP19P56211 112 aa7.27□□□□□ -1.25
NR1I3-224ENST00000507215 GPR85P60893 370 aa7.27□□□□□ -1.25
NR1I3-224ENST00000507215 DLG4P78352 724 aa7.27□□□□□ -1.25
NR1I3-224ENST00000507215 YWHAHQ04917 246 aaPredicted RBP7.27□□□□□ -1.25
NR1I3-224ENST00000507215 ORC2Q13416 577 aaPredicted RBP7.27□□□□□ -1.25
NR1I3-224ENST00000507215 MYBPC2Q14324 1141 aa7.27□□□□□ -1.25
NR1I3-224ENST00000507215 VEPH1Q14D04 833 aa7.27□□□□□ -1.25
NR1I3-224ENST00000507215 PON2Q15165 354 aa7.27□□□□□ -1.25
NR1I3-224ENST00000507215 USP39Q53GS9 565 aaKnown RBP7.27□□□□□ -1.25
NR1I3-224ENST00000507215 TMEM196Q5HYL7 178 aa7.27□□□□□ -1.25
NR1I3-224ENST00000507215 SPDYCQ5MJ68 293 aa7.27□□□□□ -1.25
NR1I3-224ENST00000507215 HAUS3Q68CZ6 603 aa7.27□□□□□ -1.25
NR1I3-224ENST00000507215 CD300LGQ6UXG3 332 aa7.27□□□□□ -1.25
NR1I3-224ENST00000507215 ALKAL1Q6UXT8 129 aa7.27□□□□□ -1.25
NR1I3-224ENST00000507215 PIK3AP1Q6ZUJ8 805 aa7.27□□□□□ -1.25
NR1I3-224ENST00000507215 SYT13Q7L8C5 426 aa7.27□□□□□ -1.25
NR1I3-224ENST00000507215 RABEPKQ7Z6M1 372 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms