RNA–Protein interactions for RNA: ENST00000506542.1

SERF1B-204, Transcript of small EDRK-rich factor 1B, humanhuman

TSL 3 BASIC

Gene SERF1B, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1B-204ENST00000506542 NMUR1Q9HB89 426 aa14.42□□□□□ -0.1
SERF1B-204ENST00000506542 CNGB3Q9NQW8 809 aa14.42□□□□□ -0.1
SERF1B-204ENST00000506542 DDX56Q9NY93 547 aaKnown RBP14.42□□□□□ -0.1
SERF1B-204ENST00000506542 TRPM5Q9NZQ8 1165 aa14.42□□□□□ -0.1
SERF1B-204ENST00000506542 WNT16Q9UBV4 365 aa14.42□□□□□ -0.1
SERF1B-204ENST00000506542 MIA3Q5JRA6 1907 aa14.41□□□□□ -0.1
SERF1B-204ENST00000506542 ATG2BQ96BY7 2078 aa14.41□□□□□ -0.1
SERF1B-204ENST00000506542 GOLGA6L10A0A0M3HER8 536 aa14.41□□□□□ -0.1
SERF1B-204ENST00000506542 OTOL1A6NHN0 477 aaPredicted RBP14.41□□□□□ -0.1
SERF1B-204ENST00000506542 DAB1O75553 588 aa14.41□□□□□ -0.1
SERF1B-204ENST00000506542 TBX18O95935 607 aa14.41□□□□□ -0.1
SERF1B-204ENST00000506542 DESP17661 470 aa14.41□□□□□ -0.1
SERF1B-204ENST00000506542 HDCP19113 662 aa14.41□□□□□ -0.1
SERF1B-204ENST00000506542 IL1R2P27930 398 aa14.41□□□□□ -0.1
SERF1B-204ENST00000506542 MIPP30301 263 aa14.41□□□□□ -0.1
SERF1B-204ENST00000506542 ATP13A4Q4VNC1 1196 aa14.41□□□□□ -0.1
SERF1B-204ENST00000506542 TXNRD3NBQ6F5E7 133 aa14.41□□□□□ -0.1
SERF1B-204ENST00000506542 CCDC70Q6NSX1 233 aa14.41□□□□□ -0.1
SERF1B-204ENST00000506542 RCOR2Q8IZ40 523 aa14.41□□□□□ -0.1
SERF1B-204ENST00000506542 WBP2Q969T9 261 aa14.41□□□□□ -0.1
SERF1B-204ENST00000506542 RBM41Q96IZ5 413 aaKnown RBP14.41□□□□□ -0.1
SERF1B-204ENST00000506542 NCAPGQ9BPX3 1015 aa14.41□□□□□ -0.1
SERF1B-204ENST00000506542 ULBP1Q9BZM6 244 aa14.41□□□□□ -0.1
SERF1B-204ENST00000506542 TDP1Q9NUW8 608 aa14.41□□□□□ -0.1
SERF1B-204ENST00000506542 USP34Q70CQ2 3546 aa14.41□□□□□ -0.1
SERF1B-204ENST00000506542 TRAV19A0A0A6YYK7 116 aa14.4□□□□□ -0.1
SERF1B-204ENST00000506542 TARSL2A2RTX5 802 aaKnown RBP14.4□□□□□ -0.1
SERF1B-204ENST00000506542 SART1O43290 800 aaKnown RBP14.4□□□□□ -0.1
SERF1B-204ENST00000506542 KRT1P04264 644 aa14.4□□□□□ -0.1
SERF1B-204ENST00000506542 DCNP07585 359 aaKnown RBP14.4□□□□□ -0.1
SERF1B-204ENST00000506542 MATKP42679 507 aa14.4□□□□□ -0.1
SERF1B-204ENST00000506542 DAOAP59103 153 aa14.4□□□□□ -0.1
SERF1B-204ENST00000506542 YWHAZP63104 245 aaKnown RBP14.4□□□□□ -0.1
SERF1B-204ENST00000506542 FCHO2Q0JRZ9 810 aa14.4□□□□□ -0.1
SERF1B-204ENST00000506542 GLE1Q53GS7 698 aaKnown RBP14.4□□□□□ -0.1
SERF1B-204ENST00000506542 SH3PXD2AQ5TCZ1 1133 aa14.4□□□□□ -0.1
SERF1B-204ENST00000506542 NAIF1Q69YI7 327 aaPredicted RBP14.4□□□□□ -0.1
SERF1B-204ENST00000506542 C8orf74Q6P047 294 aa14.4□□□□□ -0.1
SERF1B-204ENST00000506542 TPRG1Q6ZUI0 275 aa14.4□□□□□ -0.1
SERF1B-204ENST00000506542 ADAT2Q7Z6V5 191 aaKnown RBP14.4□□□□□ -0.1
SERF1B-204ENST00000506542 CCDC50Q8IVM0 306 aa14.4□□□□□ -0.1
SERF1B-204ENST00000506542 SCML4Q8N228 414 aa14.4□□□□□ -0.1
SERF1B-204ENST00000506542 BPIFB1Q8TDL5 484 aa14.4□□□□□ -0.1
SERF1B-204ENST00000506542 CENPIQ92674 756 aaPredicted RBP14.4□□□□□ -0.1
SERF1B-204ENST00000506542 SLITRK1Q96PX8 696 aa14.4□□□□□ -0.1
SERF1B-204ENST00000506542 KRT12Q99456 494 aa14.4□□□□□ -0.1
SERF1B-204ENST00000506542 LRRC1Q9BTT6 524 aa14.4□□□□□ -0.1
SERF1B-204ENST00000506542 DDX23Q9BUQ8 820 aaKnown RBP14.4□□□□□ -0.1
SERF1B-204ENST00000506542 PARD6BQ9BYG5 372 aa14.4□□□□□ -0.1
SERF1B-204ENST00000506542 EBF3Q9H4W6 596 aa14.4□□□□□ -0.1
SERF1B-204ENST00000506542 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.4□□□□□ -0.1
SERF1B-204ENST00000506542 IL37Q9NZH6 218 aa14.4□□□□□ -0.1
SERF1B-204ENST00000506542 USP18Q9UMW8 372 aa14.4□□□□□ -0.1
SERF1B-204ENST00000506542 WNT6Q9Y6F9 365 aa14.4□□□□□ -0.1
SERF1B-204ENST00000506542 A0A1W2PQH9 124 aa14.39□□□□□ -0.11
SERF1B-204ENST00000506542 MDM4O15151 490 aa14.39□□□□□ -0.11
SERF1B-204ENST00000506542 COCHO43405 550 aa14.39□□□□□ -0.11
SERF1B-204ENST00000506542 RTN3O95197 1032 aaPredicted RBP14.39□□□□□ -0.11
SERF1B-204ENST00000506542 TRUB2O95900 331 aaKnown RBP14.39□□□□□ -0.11
SERF1B-204ENST00000506542 OAS1P00973 400 aaKnown RBP14.39□□□□□ -0.11
SERF1B-204ENST00000506542 GLULP15104 373 aa14.39□□□□□ -0.11
SERF1B-204ENST00000506542 ARSAP15289 507 aa14.39□□□□□ -0.11
SERF1B-204ENST00000506542 PTPN7P35236 360 aa14.39□□□□□ -0.11
SERF1B-204ENST00000506542 COPS2P61201 443 aa14.39□□□□□ -0.11
SERF1B-204ENST00000506542 ATP11AP98196 1134 aa14.39□□□□□ -0.11
SERF1B-204ENST00000506542 SIX1Q15475 284 aaPredicted RBP14.39□□□□□ -0.11
SERF1B-204ENST00000506542 MLF2Q15773 248 aaPredicted RBP14.39□□□□□ -0.11
SERF1B-204ENST00000506542 PPP2R5EQ16537 467 aa14.39□□□□□ -0.11
SERF1B-204ENST00000506542 CDO1Q16878 200 aa14.39□□□□□ -0.11
SERF1B-204ENST00000506542 RAB6CQ53S08 254 aa14.39□□□□□ -0.11
SERF1B-204ENST00000506542 BMP8AQ7Z5Y6 402 aa14.39□□□□□ -0.11
SERF1B-204ENST00000506542 YAF2Q8IY57 180 aa14.39□□□□□ -0.11
SERF1B-204ENST00000506542 DEFB106AQ8N104 65 aa14.39□□□□□ -0.11
SERF1B-204ENST00000506542 CELF5Q8N6W0 485 aaKnown RBP14.39□□□□□ -0.11
SERF1B-204ENST00000506542 SH3RF2Q8TEC5 729 aa14.39□□□□□ -0.11
SERF1B-204ENST00000506542 FAM172AQ8WUF8 416 aa14.39□□□□□ -0.11
SERF1B-204ENST00000506542 FAM149B1Q96BN6 582 aa14.39□□□□□ -0.11
SERF1B-204ENST00000506542 SLC2A13Q96QE2 648 aa14.39□□□□□ -0.11
SERF1B-204ENST00000506542 PEBP4Q96S96 227 aa14.39□□□□□ -0.11
SERF1B-204ENST00000506542 PNKPQ96T60 521 aa14.39□□□□□ -0.11
SERF1B-204ENST00000506542 RAB6CQ9H0N0 254 aa14.39□□□□□ -0.11
SERF1B-204ENST00000506542 DDX47Q9H0S4 455 aaKnown RBP14.39□□□□□ -0.11
SERF1B-204ENST00000506542 LINC00597Q9H2U6 94 aa14.39□□□□□ -0.11
SERF1B-204ENST00000506542 ZWILCHQ9H900 591 aa14.39□□□□□ -0.11
SERF1B-204ENST00000506542 GKN1Q9NS71 199 aa14.39□□□□□ -0.11
SERF1B-204ENST00000506542 KLHL11Q9NVR0 708 aa14.39□□□□□ -0.11
SERF1B-204ENST00000506542 PCSK1NQ9UHG2 260 aa14.39□□□□□ -0.11
SERF1B-204ENST00000506542 RAB21Q9UL25 225 aa14.39□□□□□ -0.11
SERF1B-204ENST00000506542 TCRBV7S2A1N4TA0A589 114 aa14.39□□□□□ -0.11
SERF1B-204ENST00000506542 ZBED1O96006 694 aa14.39□□□□□ -0.11
SERF1B-204ENST00000506542 TUBBP07437 444 aa14.39□□□□□ -0.11
SERF1B-204ENST00000506542 USP17L7P0C7H9 530 aa14.39□□□□□ -0.11
SERF1B-204ENST00000506542 H2AFXP16104 143 aaPredicted RBP14.39□□□□□ -0.11
SERF1B-204ENST00000506542 AVPR2P30518 371 aa14.39□□□□□ -0.11
SERF1B-204ENST00000506542 CETN2P41208 172 aa14.39□□□□□ -0.11
SERF1B-204ENST00000506542 SMTNL2Q2TAL5 461 aa14.39□□□□□ -0.11
SERF1B-204ENST00000506542 ZFYVE27Q5T4F4 411 aa14.39□□□□□ -0.11
SERF1B-204ENST00000506542 PM20D1Q6GTS8 502 aa14.39□□□□□ -0.11
SERF1B-204ENST00000506542 TXNDC11Q6PKC3 985 aa14.39□□□□□ -0.11
SERF1B-204ENST00000506542 CYP4V2Q6ZWL3 525 aaPredicted RBP14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms