RNA–Protein interactions for RNA: ENST00000506042.5

SQSTM1-210, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 921 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-210ENST00000506042 RING1Q06587 406 aa21.93■■□□□ 1.1
SQSTM1-210ENST00000506042 ADIGQ0VDE8 80 aa21.93■■□□□ 1.1
SQSTM1-210ENST00000506042 SCAPQ12770 1279 aa21.93■■□□□ 1.1
SQSTM1-210ENST00000506042 STIM1Q13586 685 aa21.93■■□□□ 1.1
SQSTM1-210ENST00000506042 CUL2Q13617 745 aa21.93■■□□□ 1.1
SQSTM1-210ENST00000506042 BSPRYQ5W0U4 402 aa21.93■■□□□ 1.1
SQSTM1-210ENST00000506042 CACUL1Q86Y37 369 aa21.93■■□□□ 1.1
SQSTM1-210ENST00000506042 CD93Q9NPY3 652 aa21.93■■□□□ 1.1
SQSTM1-210ENST00000506042 TPX2Q9ULW0 747 aaKnown RBP21.93■■□□□ 1.1
SQSTM1-210ENST00000506042 FAM237AA0A1B0GTK4 181 aa21.92■■□□□ 1.1
SQSTM1-210ENST00000506042 KCNJ18B7U540 433 aa21.92■■□□□ 1.1
SQSTM1-210ENST00000506042 SMC2O95347 1197 aa21.92■■□□□ 1.1
SQSTM1-210ENST00000506042 SEMA4FO95754 770 aa21.92■■□□□ 1.1
SQSTM1-210ENST00000506042 ASLP04424 464 aa21.92■■□□□ 1.1
SQSTM1-210ENST00000506042 DLDP09622 509 aaKnown RBP21.92■■□□□ 1.1
SQSTM1-210ENST00000506042 PABPC1P11940 636 aaKnown RBP21.92■■□□□ 1.1
SQSTM1-210ENST00000506042 CCT8P50990 548 aa21.92■■□□□ 1.1
SQSTM1-210ENST00000506042 COPAP53621 1224 aa21.92■■□□□ 1.1
SQSTM1-210ENST00000506042 ACAP1Q15027 740 aa21.92■■□□□ 1.1
SQSTM1-210ENST00000506042 ZNF776Q68DI1 518 aaPredicted RBP21.92■■□□□ 1.1
SQSTM1-210ENST00000506042 CCNI2Q6ZMN8 369 aaPredicted RBP21.92■■□□□ 1.1
SQSTM1-210ENST00000506042 SCML4Q8N228 414 aa21.92■■□□□ 1.1
SQSTM1-210ENST00000506042 GANCQ8TET4 914 aa21.92■■□□□ 1.1
SQSTM1-210ENST00000506042 KCTD13Q8WZ19 329 aa21.92■■□□□ 1.1
SQSTM1-210ENST00000506042 IRGQQ8WZA9 623 aa21.92■■□□□ 1.1
SQSTM1-210ENST00000506042 ABCB8Q9NUT2 735 aa21.92■■□□□ 1.1
SQSTM1-210ENST00000506042 STOML2Q9UJZ1 356 aa21.92■■□□□ 1.1
SQSTM1-210ENST00000506042 CKAP5Q14008 2032 aa21.92■■□□□ 1.1
SQSTM1-210ENST00000506042 SART1O43290 800 aaKnown RBP21.91■■□□□ 1.1
SQSTM1-210ENST00000506042 TSPAN3O60637 253 aa21.91■■□□□ 1.1
SQSTM1-210ENST00000506042 MOCS3O95396 460 aa21.91■■□□□ 1.1
SQSTM1-210ENST00000506042 HOXD9P28356 352 aaPredicted RBP21.91■■□□□ 1.1
SQSTM1-210ENST00000506042 C21orf59P57076 290 aa21.91■■□□□ 1.1
SQSTM1-210ENST00000506042 IGSF8Q969P0 613 aa21.91■■□□□ 1.1
SQSTM1-210ENST00000506042 METTL14Q9HCE5 456 aaKnown RBP21.91■■□□□ 1.1
SQSTM1-210ENST00000506042 ARMCX3Q9UH62 379 aaPredicted RBP21.91■■□□□ 1.1
SQSTM1-210ENST00000506042 RALYQ9UKM9 306 aaKnown RBP21.91■■□□□ 1.1
SQSTM1-210ENST00000506042 ZBTB32Q9Y2Y4 487 aaPredicted RBP21.91■■□□□ 1.1
SQSTM1-210ENST00000506042 CHD6Q8TD26 2715 aa21.91■■□□□ 1.1
SQSTM1-210ENST00000506042 CACNA1EQ15878 2313 aa21.9■■□□□ 1.1
SQSTM1-210ENST00000506042 ZNF202O95125 648 aa21.9■■□□□ 1.1
SQSTM1-210ENST00000506042 PAEPP09466 180 aa21.9■■□□□ 1.1
SQSTM1-210ENST00000506042 CDK4P11802 303 aa21.9■■□□□ 1.1
SQSTM1-210ENST00000506042 CD27P26842 260 aa21.9■■□□□ 1.1
SQSTM1-210ENST00000506042 PPP1R2P41236 205 aa21.9■■□□□ 1.1
SQSTM1-210ENST00000506042 MCCD1P59942 119 aaPredicted RBP21.9■■□□□ 1.1
SQSTM1-210ENST00000506042 LRRC63Q05C16 580 aa21.9■■□□□ 1.1
SQSTM1-210ENST00000506042 ZCWPW2Q504Y3 356 aa21.9■■□□□ 1.1
SQSTM1-210ENST00000506042 USP30Q70CQ3 517 aa21.9■■□□□ 1.1
SQSTM1-210ENST00000506042 DDX51Q8N8A6 666 aaKnown RBP eCLIP21.9■■□□□ 1.1
SQSTM1-210ENST00000506042 PNPLA1Q8N8W4 532 aa21.9■■□□□ 1.1
SQSTM1-210ENST00000506042 HJURPQ8NCD3 748 aaPredicted RBP21.9■■□□□ 1.1
SQSTM1-210ENST00000506042 ACE2Q9BYF1 805 aaPredicted RBP21.9■■□□□ 1.1
SQSTM1-210ENST00000506042 TMEM245Q9H330 911 aa21.9■■□□□ 1.1
SQSTM1-210ENST00000506042 A0A1B0GVT2 93 aa21.89■■□□□ 1.09
SQSTM1-210ENST00000506042 TNFSF14O43557 240 aa21.89■■□□□ 1.09
SQSTM1-210ENST00000506042 CBFA2T3O75081 653 aa21.89■■□□□ 1.09
SQSTM1-210ENST00000506042 FBXO21O94952 628 aa21.89■■□□□ 1.09
SQSTM1-210ENST00000506042 FSBPO95073 299 aa21.89■■□□□ 1.09
SQSTM1-210ENST00000506042 PRR29P0C7W0 189 aa21.89■■□□□ 1.09
SQSTM1-210ENST00000506042 HLA-FP30511 346 aa21.89■■□□□ 1.09
SQSTM1-210ENST00000506042 CSNK1EP49674 416 aaKnown RBP21.89■■□□□ 1.09
SQSTM1-210ENST00000506042 SLC45A4Q5BKX6 768 aa21.89■■□□□ 1.09
SQSTM1-210ENST00000506042 RNF219Q5W0B1 726 aaPredicted RBP21.89■■□□□ 1.09
SQSTM1-210ENST00000506042 MBLAC2Q68D91 279 aa21.89■■□□□ 1.09
SQSTM1-210ENST00000506042 MFN1Q8IWA4 741 aa21.89■■□□□ 1.09
SQSTM1-210ENST00000506042 SORCS1Q8WY21 1168 aa21.89■■□□□ 1.09
SQSTM1-210ENST00000506042 EDEM1Q92611 657 aa21.89■■□□□ 1.09
SQSTM1-210ENST00000506042 SEMA4DQ92854 862 aa21.89■■□□□ 1.09
SQSTM1-210ENST00000506042 AZIN2Q96A70 460 aa21.89■■□□□ 1.09
SQSTM1-210ENST00000506042 GSDMAQ96QA5 445 aa21.89■■□□□ 1.09
SQSTM1-210ENST00000506042 FNDC3AQ9Y2H6 1198 aaKnown RBP21.89■■□□□ 1.09
SQSTM1-210ENST00000506042 COQ4Q9Y3A0 265 aa21.89■■□□□ 1.09
SQSTM1-210ENST00000506042 LRRC72A6NJI9 287 aa21.88■■□□□ 1.09
SQSTM1-210ENST00000506042 EIF4E1BA6NMX2 242 aaKnown RBP21.88■■□□□ 1.09
SQSTM1-210ENST00000506042 E9PAM4 449 aa21.88■■□□□ 1.09
SQSTM1-210ENST00000506042 YKT6O15498 198 aa21.88■■□□□ 1.09
SQSTM1-210ENST00000506042 HLA-EP13747 358 aa21.88■■□□□ 1.09
SQSTM1-210ENST00000506042 LCP1P13796 627 aa21.88■■□□□ 1.09
SQSTM1-210ENST00000506042 NNMTP40261 264 aa21.88■■□□□ 1.09
SQSTM1-210ENST00000506042 NUCB2P80303 420 aa21.88■■□□□ 1.09
SQSTM1-210ENST00000506042 PKP1Q13835 747 aa21.88■■□□□ 1.09
SQSTM1-210ENST00000506042 COL9A2Q14055 689 aaPredicted RBP21.88■■□□□ 1.09
SQSTM1-210ENST00000506042 SERPINB11Q96P15 392 aa21.88■■□□□ 1.09
SQSTM1-210ENST00000506042 NT5C1BQ96P26 610 aa21.88■■□□□ 1.09
SQSTM1-210ENST00000506042 SFMBT1Q9UHJ3 866 aa21.88■■□□□ 1.09
SQSTM1-210ENST00000506042 ANKRD6Q9Y2G4 727 aa21.88■■□□□ 1.09
SQSTM1-210ENST00000506042 CEP83Q9Y592 693 aa21.88■■□□□ 1.09
SQSTM1-210ENST00000506042 PCDHGA12O60330 932 aa21.87■■□□□ 1.09
SQSTM1-210ENST00000506042 TBL1XO60907 577 aa21.87■■□□□ 1.09
SQSTM1-210ENST00000506042 TBX4P57082 545 aa21.87■■□□□ 1.09
SQSTM1-210ENST00000506042 DAOAP59103 153 aa21.87■■□□□ 1.09
SQSTM1-210ENST00000506042 CDH18Q13634 790 aa21.87■■□□□ 1.09
SQSTM1-210ENST00000506042 ZNF658Q5TYW1 1059 aaPredicted RBP21.87■■□□□ 1.09
SQSTM1-210ENST00000506042 MSANTD2Q6P1R3 559 aa21.87■■□□□ 1.09
SQSTM1-210ENST00000506042 TMPRSS7Q7RTY8 843 aa21.87■■□□□ 1.09
SQSTM1-210ENST00000506042 KDM1BQ8NB78 822 aa21.87■■□□□ 1.09
SQSTM1-210ENST00000506042 CYB5D2Q8WUJ1 264 aa21.87■■□□□ 1.09
SQSTM1-210ENST00000506042 TATDN2Q93075 761 aa21.87■■□□□ 1.09
SQSTM1-210ENST00000506042 TM9SF3Q9HD45 589 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms