RNA–Protein interactions for RNA: ENST00000504440.1

NPHP3-AS1-202, NPHP3 antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP3-AS1, Length 2,507 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-AS1-202ENST00000504440 PEBP4Q96S96 227 aa6.83□□□□□ -1.32
NPHP3-AS1-202ENST00000504440 CALN1Q9BXU9 219 aa6.83□□□□□ -1.32
NPHP3-AS1-202ENST00000504440 MAGEB5Q9BZ81 275 aa6.83□□□□□ -1.32
NPHP3-AS1-202ENST00000504440 TRIM6Q9C030 488 aaPredicted RBP6.83□□□□□ -1.32
NPHP3-AS1-202ENST00000504440 XYLT2Q9H1B5 865 aa6.83□□□□□ -1.32
NPHP3-AS1-202ENST00000504440 ACSS3Q9H6R3 686 aa6.83□□□□□ -1.32
NPHP3-AS1-202ENST00000504440 ACTR10Q9NZ32 417 aa6.83□□□□□ -1.32
NPHP3-AS1-202ENST00000504440 HACL1Q9UJ83 578 aa6.83□□□□□ -1.32
NPHP3-AS1-202ENST00000504440 LRRC42Q9Y546 428 aa6.83□□□□□ -1.32
NPHP3-AS1-202ENST00000504440 TCRBV9S1A1TA0A576 114 aa6.82□□□□□ -1.32
NPHP3-AS1-202ENST00000504440 DPPA5A6NC42 116 aa6.82□□□□□ -1.32
NPHP3-AS1-202ENST00000504440 KBTBD13C9JR72 458 aa6.82□□□□□ -1.32
NPHP3-AS1-202ENST00000504440 CYB561D2O14569 222 aa6.82□□□□□ -1.32
NPHP3-AS1-202ENST00000504440 ADCY3O60266 1144 aa6.82□□□□□ -1.32
NPHP3-AS1-202ENST00000504440 MSCO60682 206 aa6.82□□□□□ -1.32
NPHP3-AS1-202ENST00000504440 LPXNO60711 386 aa6.82□□□□□ -1.32
NPHP3-AS1-202ENST00000504440 STAM2O75886 525 aa6.82□□□□□ -1.32
NPHP3-AS1-202ENST00000504440 ATP5HO75947 161 aa6.82□□□□□ -1.32
NPHP3-AS1-202ENST00000504440 WFS1O76024 890 aa6.82□□□□□ -1.32
NPHP3-AS1-202ENST00000504440 ZWINTO95229 277 aa6.82□□□□□ -1.32
NPHP3-AS1-202ENST00000504440 LDHAP00338 332 aaKnown RBP6.82□□□□□ -1.32
NPHP3-AS1-202ENST00000504440 MT-ND3P03897 115 aa6.82□□□□□ -1.32
NPHP3-AS1-202ENST00000504440 RBP3P10745 1247 aa6.82□□□□□ -1.32
NPHP3-AS1-202ENST00000504440 NEFHP12036 1026 aa6.82□□□□□ -1.32
NPHP3-AS1-202ENST00000504440 SLC18A1P54219 525 aa6.82□□□□□ -1.32
NPHP3-AS1-202ENST00000504440 YWHAGP61981 247 aaKnown RBP eCLIP6.82□□□□□ -1.32
NPHP3-AS1-202ENST00000504440 TRPC3Q13507 836 aa6.82□□□□□ -1.32
NPHP3-AS1-202ENST00000504440 TNFAIP1Q13829 316 aa6.82□□□□□ -1.32
NPHP3-AS1-202ENST00000504440 BLMHQ13867 455 aa6.82□□□□□ -1.32
NPHP3-AS1-202ENST00000504440 KPNB1Q14974 876 aaKnown RBP6.82□□□□□ -1.32
NPHP3-AS1-202ENST00000504440 C15orf59Q2T9L4 293 aaPredicted RBP6.82□□□□□ -1.32
NPHP3-AS1-202ENST00000504440 EEF1DP3Q658K8 133 aa6.82□□□□□ -1.32
NPHP3-AS1-202ENST00000504440 CAPRIN2Q6IMN6 1127 aaKnown RBP6.82□□□□□ -1.32
NPHP3-AS1-202ENST00000504440 TRNP1Q6NT89 227 aa6.82□□□□□ -1.32
NPHP3-AS1-202ENST00000504440 ATP11CQ8NB49 1132 aa6.82□□□□□ -1.32
NPHP3-AS1-202ENST00000504440 SHKBP1Q8TBC3 707 aa6.82□□□□□ -1.32
NPHP3-AS1-202ENST00000504440 PTCD3Q96EY7 689 aaKnown RBP6.82□□□□□ -1.32
NPHP3-AS1-202ENST00000504440 PPP1R16BQ96T49 567 aa6.82□□□□□ -1.32
NPHP3-AS1-202ENST00000504440 TSSK1BQ9BXA7 367 aa6.82□□□□□ -1.32
NPHP3-AS1-202ENST00000504440 TMEM120AQ9BXJ8 343 aa6.82□□□□□ -1.32
NPHP3-AS1-202ENST00000504440 OSBPL1AQ9BXW6 950 aa6.82□□□□□ -1.32
NPHP3-AS1-202ENST00000504440 GPATCH2LQ9NWQ4 482 aa6.82□□□□□ -1.32
NPHP3-AS1-202ENST00000504440 DDX56Q9NY93 547 aaKnown RBP6.82□□□□□ -1.32
NPHP3-AS1-202ENST00000504440 NR2E3Q9Y5X4 410 aa6.82□□□□□ -1.32
NPHP3-AS1-202ENST00000504440 ARID2Q68CP9 1835 aa6.82□□□□□ -1.32
NPHP3-AS1-202ENST00000504440 CCDC195A0A1B0GUA6 201 aa6.82□□□□□ -1.32
NPHP3-AS1-202ENST00000504440 EME2A4GXA9 379 aaPredicted RBP6.82□□□□□ -1.32
NPHP3-AS1-202ENST00000504440 SIGLEC16A6NMB1 481 aa6.82□□□□□ -1.32
NPHP3-AS1-202ENST00000504440 ENO4A6NNW6 628 aa6.82□□□□□ -1.32
NPHP3-AS1-202ENST00000504440 F5H423 210 aaPredicted RBP6.82□□□□□ -1.32
NPHP3-AS1-202ENST00000504440 H0YCG3 227 aa6.82□□□□□ -1.32
NPHP3-AS1-202ENST00000504440 GSC2O15499 205 aa6.82□□□□□ -1.32
NPHP3-AS1-202ENST00000504440 DKC1O60832 514 aaKnown RBP eCLIP6.82□□□□□ -1.32
NPHP3-AS1-202ENST00000504440 HOXC6P09630 235 aa6.82□□□□□ -1.32
NPHP3-AS1-202ENST00000504440 KITP10721 976 aa6.82□□□□□ -1.32
NPHP3-AS1-202ENST00000504440 PTPN7P35236 360 aa6.82□□□□□ -1.32
NPHP3-AS1-202ENST00000504440 PCK1P35558 622 aa6.82□□□□□ -1.32
NPHP3-AS1-202ENST00000504440 ETV4P43268 484 aa6.82□□□□□ -1.32
NPHP3-AS1-202ENST00000504440 RPL6Q02878 288 aaKnown RBP6.82□□□□□ -1.32
NPHP3-AS1-202ENST00000504440 GSTM4Q03013 218 aa6.82□□□□□ -1.32
NPHP3-AS1-202ENST00000504440 ENPEPQ07075 957 aa6.82□□□□□ -1.32
NPHP3-AS1-202ENST00000504440 BMPR2Q13873 1038 aa6.82□□□□□ -1.32
NPHP3-AS1-202ENST00000504440 SMAD1Q15797 465 aaKnown RBP6.82□□□□□ -1.32
NPHP3-AS1-202ENST00000504440 DDR2Q16832 855 aa6.82□□□□□ -1.32
NPHP3-AS1-202ENST00000504440 CDO1Q16878 200 aa6.82□□□□□ -1.32
NPHP3-AS1-202ENST00000504440 LY6KQ17RY6 165 aa6.82□□□□□ -1.32
NPHP3-AS1-202ENST00000504440 DUOXA2Q1HG44 320 aa6.82□□□□□ -1.32
NPHP3-AS1-202ENST00000504440 SGSM1Q2NKQ1 1148 aa6.82□□□□□ -1.32
NPHP3-AS1-202ENST00000504440 ZNF699Q32M78 642 aa6.82□□□□□ -1.32
NPHP3-AS1-202ENST00000504440 ACSBG2Q5FVE4 666 aa6.82□□□□□ -1.32
NPHP3-AS1-202ENST00000504440 XRRA1Q6P2D8 792 aa6.82□□□□□ -1.32
NPHP3-AS1-202ENST00000504440 DARS2Q6PI48 645 aaKnown RBP6.82□□□□□ -1.32
NPHP3-AS1-202ENST00000504440 C4orf50Q6ZRC1 276 aa6.82□□□□□ -1.32
NPHP3-AS1-202ENST00000504440 SH2D5Q6ZV89 423 aa6.82□□□□□ -1.32
NPHP3-AS1-202ENST00000504440 BBS12Q6ZW61 710 aa6.82□□□□□ -1.32
NPHP3-AS1-202ENST00000504440 XYLT1Q86Y38 959 aa6.82□□□□□ -1.32
NPHP3-AS1-202ENST00000504440 RNF149Q8NC42 400 aa6.82□□□□□ -1.32
NPHP3-AS1-202ENST00000504440 SPATA18Q8TC71 538 aa6.82□□□□□ -1.32
NPHP3-AS1-202ENST00000504440 UCMAQ8WVF2 138 aa6.82□□□□□ -1.32
NPHP3-AS1-202ENST00000504440 WRNIP1Q96S55 665 aa6.82□□□□□ -1.32
NPHP3-AS1-202ENST00000504440 ACO2Q99798 780 aaKnown RBP6.82□□□□□ -1.32
NPHP3-AS1-202ENST00000504440 YIPF3Q9GZM5 350 aa6.82□□□□□ -1.32
NPHP3-AS1-202ENST00000504440 SMYD3Q9H7B4 428 aa6.82□□□□□ -1.32
NPHP3-AS1-202ENST00000504440 PLAC1Q9HBJ0 212 aa6.82□□□□□ -1.32
NPHP3-AS1-202ENST00000504440 SENP1Q9P0U3 644 aa6.82□□□□□ -1.32
NPHP3-AS1-202ENST00000504440 ADARB2-AS1A8MUL3 147 aa6.81□□□□□ -1.32
NPHP3-AS1-202ENST00000504440 E7ESA3 106 aa6.81□□□□□ -1.32
NPHP3-AS1-202ENST00000504440 TRAFD1O14545 582 aaPredicted RBP6.81□□□□□ -1.32
NPHP3-AS1-202ENST00000504440 ABLIM1O14639 778 aa6.81□□□□□ -1.32
NPHP3-AS1-202ENST00000504440 LSM8O95777 96 aaKnown RBP6.81□□□□□ -1.32
NPHP3-AS1-202ENST00000504440 TRUB2O95900 331 aaKnown RBP6.81□□□□□ -1.32
NPHP3-AS1-202ENST00000504440 GSTP1P09211 210 aaKnown RBP6.81□□□□□ -1.32
NPHP3-AS1-202ENST00000504440 DLDP09622 509 aaKnown RBP6.81□□□□□ -1.32
NPHP3-AS1-202ENST00000504440 TROVE2P10155 538 aaKnown RBP eCLIP6.81□□□□□ -1.32
NPHP3-AS1-202ENST00000504440 MYL2P10916 166 aa6.81□□□□□ -1.32
NPHP3-AS1-202ENST00000504440 UBA1P22314 1058 aaKnown RBP6.81□□□□□ -1.32
NPHP3-AS1-202ENST00000504440 HSD3B2P26439 372 aa6.81□□□□□ -1.32
NPHP3-AS1-202ENST00000504440 PHBP35232 272 aa6.81□□□□□ -1.32
NPHP3-AS1-202ENST00000504440 NEK3P51956 506 aa6.81□□□□□ -1.32
NPHP3-AS1-202ENST00000504440 ARFIP2P53365 341 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms