RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 NOL8Q76FK4 1167 aaKnown RBP2.39□□□□□ -2.03
HMGB3P17-201ENST00000504195 OVCH2Q7RTZ1 564 aa2.39□□□□□ -2.03
HMGB3P17-201ENST00000504195 TFAP2DQ7Z6R9 452 aa2.39□□□□□ -2.03
HMGB3P17-201ENST00000504195 ADGRF4Q8IZF3 695 aa2.39□□□□□ -2.03
HMGB3P17-201ENST00000504195 KAT2BQ92831 832 aa2.39□□□□□ -2.03
HMGB3P17-201ENST00000504195 P2RY11Q96G91 374 aa2.39□□□□□ -2.03
HMGB3P17-201ENST00000504195 SENP7Q9BQF6 1050 aa2.39□□□□□ -2.03
HMGB3P17-201ENST00000504195 HTATIP2Q9BUP3 242 aa2.39□□□□□ -2.03
HMGB3P17-201ENST00000504195 GATA5Q9BWX5 397 aaPredicted RBP2.39□□□□□ -2.03
HMGB3P17-201ENST00000504195 RTFDC1Q9BY42 306 aaPredicted RBP2.39□□□□□ -2.03
HMGB3P17-201ENST00000504195 RNF26Q9BY78 433 aaPredicted RBP2.39□□□□□ -2.03
HMGB3P17-201ENST00000504195 SEZ6LQ9BYH1 1024 aa2.39□□□□□ -2.03
HMGB3P17-201ENST00000504195 C22orf23Q9BZE7 217 aa2.39□□□□□ -2.03
HMGB3P17-201ENST00000504195 CDT1Q9H211 546 aa2.39□□□□□ -2.03
HMGB3P17-201ENST00000504195 TMEM60Q9H2L4 133 aa2.39□□□□□ -2.03
HMGB3P17-201ENST00000504195 YY1AP1Q9H869 796 aa2.39□□□□□ -2.03
HMGB3P17-201ENST00000504195 VPS45Q9NRW7 570 aa2.39□□□□□ -2.03
HMGB3P17-201ENST00000504195 TYW1Q9NV66 732 aaKnown RBP2.39□□□□□ -2.03
HMGB3P17-201ENST00000504195 RGS17Q9UGC6 210 aaPredicted RBP2.39□□□□□ -2.03
HMGB3P17-201ENST00000504195 MID2Q9UJV3 735 aa2.39□□□□□ -2.03
HMGB3P17-201ENST00000504195 ITGB1BP2Q9UKP3 347 aa2.39□□□□□ -2.03
HMGB3P17-201ENST00000504195 AGO2Q9UKV8 859 aaKnown RBP2.39□□□□□ -2.03
HMGB3P17-201ENST00000504195 OGDHLQ9ULD0 1010 aa2.39□□□□□ -2.03
HMGB3P17-201ENST00000504195 PCDHGB1Q9Y5G3 927 aa2.39□□□□□ -2.03
HMGB3P17-201ENST00000504195 SCN5AQ14524 2016 aa2.39□□□□□ -2.03
HMGB3P17-201ENST00000504195 COL15A1P39059 1388 aa2.38□□□□□ -2.03
HMGB3P17-201ENST00000504195 TRBV5-3A0A0A0MS03 114 aa2.38□□□□□ -2.03
HMGB3P17-201ENST00000504195 GOLIM4O00461 696 aa2.38□□□□□ -2.03
HMGB3P17-201ENST00000504195 TCERG1O14776 1098 aaKnown RBP2.38□□□□□ -2.03
HMGB3P17-201ENST00000504195 PRPF3O43395 683 aaKnown RBP2.38□□□□□ -2.03
HMGB3P17-201ENST00000504195 WDR47O94967 919 aa2.38□□□□□ -2.03
HMGB3P17-201ENST00000504195 ACAA1P09110 424 aaPredicted RBP2.38□□□□□ -2.03
HMGB3P17-201ENST00000504195 U2AF1L5P0DN76 240 aaPredicted RBP2.38□□□□□ -2.03
HMGB3P17-201ENST00000504195 BTF3P20290 206 aaKnown RBP2.38□□□□□ -2.03
HMGB3P17-201ENST00000504195 YY1P25490 414 aa2.38□□□□□ -2.03
HMGB3P17-201ENST00000504195 ERVFC1-1P60608 527 aa2.38□□□□□ -2.03
HMGB3P17-201ENST00000504195 RPS16P62249 146 aaKnown RBP2.38□□□□□ -2.03
HMGB3P17-201ENST00000504195 RAE1P78406 368 aaKnown RBP2.38□□□□□ -2.03
HMGB3P17-201ENST00000504195 IRX3P78415 501 aaPredicted RBP2.38□□□□□ -2.03
HMGB3P17-201ENST00000504195 U2AF1Q01081 240 aaKnown RBP eCLIP2.38□□□□□ -2.03
HMGB3P17-201ENST00000504195 POU5F1BQ06416 359 aa2.38□□□□□ -2.03
HMGB3P17-201ENST00000504195 HDAC1Q13547 482 aaPredicted RBP2.38□□□□□ -2.03
HMGB3P17-201ENST00000504195 KCNAB1Q14722 419 aa2.38□□□□□ -2.03
HMGB3P17-201ENST00000504195 RALBP1Q15311 655 aa2.38□□□□□ -2.03
HMGB3P17-201ENST00000504195 TTF1Q15361 905 aaPredicted RBP2.38□□□□□ -2.03
HMGB3P17-201ENST00000504195 DLGAP5Q15398 846 aa2.38□□□□□ -2.03
HMGB3P17-201ENST00000504195 CNN3Q15417 329 aaKnown RBP2.38□□□□□ -2.03
HMGB3P17-201ENST00000504195 HSP90AB3PQ58FF7 597 aa2.38□□□□□ -2.03
HMGB3P17-201ENST00000504195 MANEALQ5VSG8 457 aa2.38□□□□□ -2.03
HMGB3P17-201ENST00000504195 WDR78Q5VTH9 848 aa2.38□□□□□ -2.03
HMGB3P17-201ENST00000504195 PLAG1Q6DJT9 500 aa2.38□□□□□ -2.03
HMGB3P17-201ENST00000504195 GRHL2Q6ISB3 625 aa2.38□□□□□ -2.03
HMGB3P17-201ENST00000504195 SWSAP1Q6NVH7 229 aa2.38□□□□□ -2.03
HMGB3P17-201ENST00000504195 APOA5Q6Q788 366 aa2.38□□□□□ -2.03
HMGB3P17-201ENST00000504195 RINLQ6ZS11 566 aa2.38□□□□□ -2.03
HMGB3P17-201ENST00000504195 EPM2AIP1Q7L775 607 aaPredicted RBP2.38□□□□□ -2.03
HMGB3P17-201ENST00000504195 TPH2Q8IWU9 490 aa2.38□□□□□ -2.03
HMGB3P17-201ENST00000504195 SDR16C5Q8N3Y7 309 aa2.38□□□□□ -2.03
HMGB3P17-201ENST00000504195 OTUD6BQ8N6M0 293 aa2.38□□□□□ -2.03
HMGB3P17-201ENST00000504195 MBD3L2Q8NHZ7 208 aaPredicted RBP2.38□□□□□ -2.03
HMGB3P17-201ENST00000504195 OIT3Q8WWZ8 545 aa2.38□□□□□ -2.03
HMGB3P17-201ENST00000504195 LPAR1Q92633 364 aa2.38□□□□□ -2.03
HMGB3P17-201ENST00000504195 CHST8Q9H2A9 424 aa2.38□□□□□ -2.03
HMGB3P17-201ENST00000504195 SAP30LQ9HAJ7 183 aa2.38□□□□□ -2.03
HMGB3P17-201ENST00000504195 ZNF287Q9HBT7 754 aa2.38□□□□□ -2.03
HMGB3P17-201ENST00000504195 MOV10Q9HCE1 1003 aaKnown RBP2.38□□□□□ -2.03
HMGB3P17-201ENST00000504195 MLXIPLQ9NP71 852 aa2.38□□□□□ -2.03
HMGB3P17-201ENST00000504195 TERF2IPQ9NYB0 399 aa2.38□□□□□ -2.03
HMGB3P17-201ENST00000504195 IPO11Q9UI26 975 aaKnown RBP2.38□□□□□ -2.03
HMGB3P17-201ENST00000504195 VPS51Q9UID3 782 aa2.38□□□□□ -2.03
HMGB3P17-201ENST00000504195 HPSEQ9Y251 543 aa2.38□□□□□ -2.03
HMGB3P17-201ENST00000504195 KIR2DS5A0A0G2JLQ3 304 aa2.37□□□□□ -2.03
HMGB3P17-201ENST00000504195 A0A1W2PPC1 479 aa2.37□□□□□ -2.03
HMGB3P17-201ENST00000504195 C16orf96A6NNT2 1141 aa2.37□□□□□ -2.03
HMGB3P17-201ENST00000504195 BTBD18B2RXH4 712 aa2.37□□□□□ -2.03
HMGB3P17-201ENST00000504195 KIR2DS3K7RE56 304 aa2.37□□□□□ -2.03
HMGB3P17-201ENST00000504195 TPD52L2O43399 206 aaKnown RBP2.37□□□□□ -2.03
HMGB3P17-201ENST00000504195 RFPL1O75677 317 aa2.37□□□□□ -2.03
HMGB3P17-201ENST00000504195 MAP4K4O95819 1239 aaPredicted RBP2.37□□□□□ -2.03
HMGB3P17-201ENST00000504195 MBPP02686 304 aaPredicted RBP2.37□□□□□ -2.03
HMGB3P17-201ENST00000504195 IL1R1P14778 569 aa2.37□□□□□ -2.03
HMGB3P17-201ENST00000504195 GM2AP17900 193 aa2.37□□□□□ -2.03
HMGB3P17-201ENST00000504195 DUSP1P28562 367 aa2.37□□□□□ -2.03
HMGB3P17-201ENST00000504195 IDUAP35475 653 aa2.37□□□□□ -2.03
HMGB3P17-201ENST00000504195 SSR1P43307 286 aaKnown RBP2.37□□□□□ -2.03
HMGB3P17-201ENST00000504195 CARSP49589 748 aaKnown RBP2.37□□□□□ -2.03
HMGB3P17-201ENST00000504195 CACNB3P54284 484 aa2.37□□□□□ -2.03
HMGB3P17-201ENST00000504195 FMO1Q01740 532 aa2.37□□□□□ -2.03
HMGB3P17-201ENST00000504195 SHBQ15464 509 aa2.37□□□□□ -2.03
HMGB3P17-201ENST00000504195 GLE1Q53GS7 698 aaKnown RBP2.37□□□□□ -2.03
HMGB3P17-201ENST00000504195 CCDC181Q5TID7 509 aa2.37□□□□□ -2.03
HMGB3P17-201ENST00000504195 SPSB3Q6PJ21 355 aa2.37□□□□□ -2.03
HMGB3P17-201ENST00000504195 UNC13DQ70J99 1090 aa2.37□□□□□ -2.03
HMGB3P17-201ENST00000504195 KIAA0319LQ8IZA0 1049 aa2.37□□□□□ -2.03
HMGB3P17-201ENST00000504195 NME8Q8N427 588 aa2.37□□□□□ -2.03
HMGB3P17-201ENST00000504195 AKAP1Q92667 903 aaKnown RBP eCLIP2.37□□□□□ -2.03
HMGB3P17-201ENST00000504195 CENPIQ92674 756 aaPredicted RBP2.37□□□□□ -2.03
HMGB3P17-201ENST00000504195 CELF1Q92879 486 aaKnown RBP2.37□□□□□ -2.03
HMGB3P17-201ENST00000504195 PRR11Q96HE9 360 aaPredicted RBP2.37□□□□□ -2.03
HMGB3P17-201ENST00000504195 FAM227BQ96M60 508 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms