RNA–Protein interactions for RNA: ENST00000498810.1

CDK11A-222, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 2

Gene CDK11A, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-222ENST00000498810 LSM14BQ9BX40 385 aaKnown RBP11.13□□□□□ -0.63
CDK11A-222ENST00000498810 CNTNAP3Q9BZ76 1288 aa11.13□□□□□ -0.63
CDK11A-222ENST00000498810 C2orf42Q9NWW7 574 aa11.13□□□□□ -0.63
CDK11A-222ENST00000498810 TAB2Q9NYJ8 693 aa11.13□□□□□ -0.63
CDK11A-222ENST00000498810 PLK2Q9NYY3 685 aa11.13□□□□□ -0.63
CDK11A-222ENST00000498810 SFMBT1Q9UHJ3 866 aa11.13□□□□□ -0.63
CDK11A-222ENST00000498810 MMP17Q9ULZ9 603 aa11.13□□□□□ -0.63
CDK11A-222ENST00000498810 THADAQ6YHU6 1953 aa11.13□□□□□ -0.63
CDK11A-222ENST00000498810 VPS13AQ96RL7 3174 aa11.12□□□□□ -0.63
CDK11A-222ENST00000498810 YJEFN3A6XGL0 299 aa11.12□□□□□ -0.63
CDK11A-222ENST00000498810 E7ENQ6 273 aa11.12□□□□□ -0.63
CDK11A-222ENST00000498810 RNF225M0QZC1 329 aaPredicted RBP11.12□□□□□ -0.63
CDK11A-222ENST00000498810 MSI1O43347 362 aaKnown RBP11.12□□□□□ -0.63
CDK11A-222ENST00000498810 PON1P27169 355 aa11.12□□□□□ -0.63
CDK11A-222ENST00000498810 KRT9P35527 623 aa11.12□□□□□ -0.63
CDK11A-222ENST00000498810 TNFRSF4P43489 277 aa11.12□□□□□ -0.63
CDK11A-222ENST00000498810 ZNF132P52740 706 aa11.12□□□□□ -0.63
CDK11A-222ENST00000498810 SRSF5Q13243 272 aaKnown RBP11.12□□□□□ -0.63
CDK11A-222ENST00000498810 ELF2Q15723 593 aa11.12□□□□□ -0.63
CDK11A-222ENST00000498810 HSF5Q4G112 596 aaPredicted RBP11.12□□□□□ -0.63
CDK11A-222ENST00000498810 TCP11X2Q5H9J9 407 aa11.12□□□□□ -0.63
CDK11A-222ENST00000498810 RNFT1Q5M7Z0 435 aa11.12□□□□□ -0.63
CDK11A-222ENST00000498810 PM20D1Q6GTS8 502 aa11.12□□□□□ -0.63
CDK11A-222ENST00000498810 CCDC117Q8IWD4 279 aaPredicted RBP11.12□□□□□ -0.63
CDK11A-222ENST00000498810 CHPFQ8IZ52 775 aa11.12□□□□□ -0.63
CDK11A-222ENST00000498810 ZNF276Q8N554 614 aa11.12□□□□□ -0.63
CDK11A-222ENST00000498810 UCMAQ8WVF2 138 aa11.12□□□□□ -0.63
CDK11A-222ENST00000498810 NELL1Q92832 810 aa11.12□□□□□ -0.63
CDK11A-222ENST00000498810 SERPINB11Q96P15 392 aa11.12□□□□□ -0.63
CDK11A-222ENST00000498810 TPSD1Q9BZJ3 242 aa11.12□□□□□ -0.63
CDK11A-222ENST00000498810 GRIP2Q9C0E4 1043 aa11.12□□□□□ -0.63
CDK11A-222ENST00000498810 SAMSN1Q9NSI8 373 aaKnown RBP11.12□□□□□ -0.63
CDK11A-222ENST00000498810 DNAJC12Q9UKB3 198 aa11.12□□□□□ -0.63
CDK11A-222ENST00000498810 HBS1LQ9Y450 684 aaKnown RBP11.12□□□□□ -0.63
CDK11A-222ENST00000498810 CEP192Q8TEP8 1941 aa11.11□□□□□ -0.63
CDK11A-222ENST00000498810 TCRBV21S2A2A0A5A6 115 aa11.11□□□□□ -0.63
CDK11A-222ENST00000498810 K7EQS6 105 aa11.11□□□□□ -0.63
CDK11A-222ENST00000498810 CACNG3O60359 315 aa11.11□□□□□ -0.63
CDK11A-222ENST00000498810 APOEP02649 317 aa11.11□□□□□ -0.63
CDK11A-222ENST00000498810 HOXB2P14652 356 aa11.11□□□□□ -0.63
CDK11A-222ENST00000498810 RHOQP17081 205 aa11.11□□□□□ -0.63
CDK11A-222ENST00000498810 CDK11BP21127 795 aaKnown RBP11.11□□□□□ -0.63
CDK11A-222ENST00000498810 SLC11A2P49281 568 aa11.11□□□□□ -0.63
CDK11A-222ENST00000498810 BPIFB4P59827 614 aa11.11□□□□□ -0.63
CDK11A-222ENST00000498810 ZNF445P59923 1031 aa11.11□□□□□ -0.63
CDK11A-222ENST00000498810 APBA1Q02410 837 aa11.11□□□□□ -0.63
CDK11A-222ENST00000498810 GAB4Q2WGN9 574 aa11.11□□□□□ -0.63
CDK11A-222ENST00000498810 USP39Q53GS9 565 aaKnown RBP11.11□□□□□ -0.63
CDK11A-222ENST00000498810 NUGGCQ68CJ6 796 aa11.11□□□□□ -0.63
CDK11A-222ENST00000498810 DENND1BQ6P3S1 775 aa11.11□□□□□ -0.63
CDK11A-222ENST00000498810 CACNA2D4Q7Z3S7 1137 aa11.11□□□□□ -0.63
CDK11A-222ENST00000498810 IRF2BP1Q8IU81 584 aa11.11□□□□□ -0.63
CDK11A-222ENST00000498810 UNC45BQ8IWX7 931 aa11.11□□□□□ -0.63
CDK11A-222ENST00000498810 SCML4Q8N228 414 aa11.11□□□□□ -0.63
CDK11A-222ENST00000498810 DCLK2Q8N568 766 aa11.11□□□□□ -0.63
CDK11A-222ENST00000498810 SUMF1Q8NBK3 374 aa11.11□□□□□ -0.63
CDK11A-222ENST00000498810 MSANTD4Q8NCY6 345 aa11.11□□□□□ -0.63
CDK11A-222ENST00000498810 CLEC4CQ8WTT0 213 aa11.11□□□□□ -0.63
CDK11A-222ENST00000498810 SLC35F5Q8WV83 523 aa11.11□□□□□ -0.63
CDK11A-222ENST00000498810 HMGB4Q8WW32 186 aa11.11□□□□□ -0.63
CDK11A-222ENST00000498810 GAB3Q8WWW8 586 aa11.11□□□□□ -0.63
CDK11A-222ENST00000498810 ZNF606Q8WXB4 792 aa11.11□□□□□ -0.63
CDK11A-222ENST00000498810 EZH1Q92800 747 aaPredicted RBP11.11□□□□□ -0.63
CDK11A-222ENST00000498810 NAT10Q9H0A0 1025 aaKnown RBP11.11□□□□□ -0.63
CDK11A-222ENST00000498810 VPS16Q9H269 839 aa11.11□□□□□ -0.63
CDK11A-222ENST00000498810 FAM204AQ9H8W3 233 aa11.11□□□□□ -0.63
CDK11A-222ENST00000498810 ZDHHC4Q9NPG8 344 aa11.11□□□□□ -0.63
CDK11A-222ENST00000498810 POLR3BQ9NW08 1133 aaPredicted RBP11.11□□□□□ -0.63
CDK11A-222ENST00000498810 CUEDC1Q9NWM3 386 aaPredicted RBP11.11□□□□□ -0.63
CDK11A-222ENST00000498810 MARK1Q9P0L2 795 aa11.11□□□□□ -0.63
CDK11A-222ENST00000498810 AGO1Q9UL18 857 aaKnown RBP11.11□□□□□ -0.63
CDK11A-222ENST00000498810 NUP205Q92621 2012 aa11.1□□□□□ -0.63
CDK11A-222ENST00000498810 SYNJ2BP-COX16A0A087WUM0 186 aa11.1□□□□□ -0.63
CDK11A-222ENST00000498810 CCDC163A0A0D9SF12 145 aa11.1□□□□□ -0.63
CDK11A-222ENST00000498810 CDC14CA4D256 554 aa11.1□□□□□ -0.63
CDK11A-222ENST00000498810 E5RJQ4 531 aa11.1□□□□□ -0.63
CDK11A-222ENST00000498810 TSPAN3O60637 253 aa11.1□□□□□ -0.63
CDK11A-222ENST00000498810 MOCS2O96007 188 aaPredicted RBP11.1□□□□□ -0.63
CDK11A-222ENST00000498810 HOXA6P31267 233 aa11.1□□□□□ -0.63
CDK11A-222ENST00000498810 WASP42768 502 aa11.1□□□□□ -0.63
CDK11A-222ENST00000498810 TBX4P57082 545 aa11.1□□□□□ -0.63
CDK11A-222ENST00000498810 MYL5Q02045 173 aa11.1□□□□□ -0.63
CDK11A-222ENST00000498810 PDCLQ13371 301 aa11.1□□□□□ -0.63
CDK11A-222ENST00000498810 STARD3Q14849 445 aa11.1□□□□□ -0.63
CDK11A-222ENST00000498810 E2F5Q15329 346 aa11.1□□□□□ -0.63
CDK11A-222ENST00000498810 TRIP4Q15650 581 aaPredicted RBP11.1□□□□□ -0.63
CDK11A-222ENST00000498810 CRY1Q16526 586 aa11.1□□□□□ -0.63
CDK11A-222ENST00000498810 MEA1Q16626 185 aa11.1□□□□□ -0.63
CDK11A-222ENST00000498810 MPPE1Q53F39 396 aa11.1□□□□□ -0.63
CDK11A-222ENST00000498810 TOGARAM2Q6ZUX3 1019 aa11.1□□□□□ -0.63
CDK11A-222ENST00000498810 ANKS1BQ7Z6G8 1248 aa11.1□□□□□ -0.63
CDK11A-222ENST00000498810 SFTPA1Q8IWL2 248 aa11.1□□□□□ -0.63
CDK11A-222ENST00000498810 ETFBKMTQ8IXQ9 262 aa11.1□□□□□ -0.63
CDK11A-222ENST00000498810 IL17RCQ8NAC3 791 aa11.1□□□□□ -0.63
CDK11A-222ENST00000498810 ENOX1Q8TC92 643 aaKnown RBP11.1□□□□□ -0.63
CDK11A-222ENST00000498810 SHC3Q92529 594 aa11.1□□□□□ -0.63
CDK11A-222ENST00000498810 RNF34Q969K3 372 aa11.1□□□□□ -0.63
CDK11A-222ENST00000498810 MED15Q96RN5 788 aa11.1□□□□□ -0.63
CDK11A-222ENST00000498810 DDX50Q9BQ39 737 aaKnown RBP11.1□□□□□ -0.63
CDK11A-222ENST00000498810 ZSWIM1Q9BR11 485 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms