RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 ALADP13716 330 aa3.73□□□□□ -1.81
PSPC1-205ENST00000497722 CBSP35520 551 aa3.73□□□□□ -1.81
PSPC1-205ENST00000497722 VPS41P49754 854 aa3.73□□□□□ -1.81
PSPC1-205ENST00000497722 JAK3P52333 1124 aa3.73□□□□□ -1.81
PSPC1-205ENST00000497722 CFHR3Q02985 330 aa3.73□□□□□ -1.81
PSPC1-205ENST00000497722 PTK2BQ14289 1009 aa3.73□□□□□ -1.81
PSPC1-205ENST00000497722 ACOX1Q15067 660 aa3.73□□□□□ -1.81
PSPC1-205ENST00000497722 CNGA3Q16281 694 aa3.73□□□□□ -1.81
PSPC1-205ENST00000497722 TRIM71Q2Q1W2 868 aaKnown RBP3.73□□□□□ -1.81
PSPC1-205ENST00000497722 PXDC1Q5TGL8 231 aa3.73□□□□□ -1.81
PSPC1-205ENST00000497722 RFX8Q6ZV50 586 aa3.73□□□□□ -1.81
PSPC1-205ENST00000497722 ANKRD42Q8N9B4 389 aa3.73□□□□□ -1.81
PSPC1-205ENST00000497722 SPATA5Q8NB90 893 aa3.73□□□□□ -1.81
PSPC1-205ENST00000497722 PRSS3P2Q8NHM4 247 aa3.73□□□□□ -1.81
PSPC1-205ENST00000497722 WIPF2Q8TF74 440 aaPredicted RBP3.73□□□□□ -1.81
PSPC1-205ENST00000497722 HMGB4Q8WW32 186 aa3.73□□□□□ -1.81
PSPC1-205ENST00000497722 OVCA2Q8WZ82 227 aa3.73□□□□□ -1.81
PSPC1-205ENST00000497722 EDC3Q96F86 508 aaKnown RBP3.73□□□□□ -1.81
PSPC1-205ENST00000497722 SIGLEC11Q96RL6 698 aa3.73□□□□□ -1.81
PSPC1-205ENST00000497722 TRIM2Q9C040 744 aa3.73□□□□□ -1.81
PSPC1-205ENST00000497722 MYLK2Q9H1R3 596 aa3.73□□□□□ -1.81
PSPC1-205ENST00000497722 MYH16Q9H6N6 1097 aa3.73□□□□□ -1.81
PSPC1-205ENST00000497722 SEPSECSQ9HD40 501 aaKnown RBP3.73□□□□□ -1.81
PSPC1-205ENST00000497722 PTPRHQ9HD43 1115 aa3.73□□□□□ -1.81
PSPC1-205ENST00000497722 MTMR4Q9NYA4 1195 aa3.73□□□□□ -1.81
PSPC1-205ENST00000497722 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.73□□□□□ -1.81
PSPC1-205ENST00000497722 HERC5Q9UII4 1024 aaKnown RBP3.73□□□□□ -1.81
PSPC1-205ENST00000497722 NFU1Q9UMS0 254 aa3.73□□□□□ -1.81
PSPC1-205ENST00000497722 UBE2J1Q9Y385 318 aaPredicted RBP3.73□□□□□ -1.81
PSPC1-205ENST00000497722 DTNAQ9Y4J8 743 aa3.73□□□□□ -1.81
PSPC1-205ENST00000497722 TBC1D3DA0A087WVF3 549 aa3.72□□□□□ -1.81
PSPC1-205ENST00000497722 TBC1D3IA0A087WXS9 549 aa3.72□□□□□ -1.81
PSPC1-205ENST00000497722 TBC1D3EA0A087X179 549 aa3.72□□□□□ -1.81
PSPC1-205ENST00000497722 TBC1D3KA0A087X1G2 549 aa3.72□□□□□ -1.81
PSPC1-205ENST00000497722 TBC1D3BA6NDS4 549 aa3.72□□□□□ -1.81
PSPC1-205ENST00000497722 TBC1D3FA6NER0 549 aaPredicted RBP3.72□□□□□ -1.81
PSPC1-205ENST00000497722 EFCAB8A8MWE9 144 aa3.72□□□□□ -1.81
PSPC1-205ENST00000497722 TBC1D3LB9A6J9 549 aa3.72□□□□□ -1.81
PSPC1-205ENST00000497722 SYT5O00445 386 aa3.72□□□□□ -1.81
PSPC1-205ENST00000497722 ACKR2O00590 384 aa3.72□□□□□ -1.81
PSPC1-205ENST00000497722 ADAM10O14672 748 aa3.72□□□□□ -1.81
PSPC1-205ENST00000497722 DSCR3O14972 297 aa3.72□□□□□ -1.81
PSPC1-205ENST00000497722 NPC1O15118 1278 aa3.72□□□□□ -1.81
PSPC1-205ENST00000497722 ACTL6BO94805 426 aa3.72□□□□□ -1.81
PSPC1-205ENST00000497722 NTSR2O95665 410 aa3.72□□□□□ -1.81
PSPC1-205ENST00000497722 TBC1D3HP0C7X1 549 aa3.72□□□□□ -1.81
PSPC1-205ENST00000497722 GYS1P13807 737 aa3.72□□□□□ -1.81
PSPC1-205ENST00000497722 PRF1P14222 555 aa3.72□□□□□ -1.81
PSPC1-205ENST00000497722 KLRK1P26718 216 aa3.72□□□□□ -1.81
PSPC1-205ENST00000497722 PDIA3P30101 505 aaKnown RBP3.72□□□□□ -1.81
PSPC1-205ENST00000497722 GALNSP34059 522 aa3.72□□□□□ -1.81
PSPC1-205ENST00000497722 HTR7P34969 479 aa3.72□□□□□ -1.81
PSPC1-205ENST00000497722 AP2B1P63010 937 aa3.72□□□□□ -1.81
PSPC1-205ENST00000497722 FHL3Q13643 280 aa3.72□□□□□ -1.81
PSPC1-205ENST00000497722 ZNF268Q14587 947 aaPredicted RBP3.72□□□□□ -1.81
PSPC1-205ENST00000497722 GRM4Q14833 912 aa3.72□□□□□ -1.81
PSPC1-205ENST00000497722 BTBD16Q32M84 506 aa3.72□□□□□ -1.81
PSPC1-205ENST00000497722 AASDHQ4L235 1098 aaPredicted RBP3.72□□□□□ -1.81
PSPC1-205ENST00000497722 TBC1D3GQ6DHY5 549 aa3.72□□□□□ -1.81
PSPC1-205ENST00000497722 SULT6B1Q6IMI4 303 aa3.72□□□□□ -1.81
PSPC1-205ENST00000497722 TBC1D3CQ6IPX1 549 aa3.72□□□□□ -1.81
PSPC1-205ENST00000497722 GRHL2Q6ISB3 625 aa3.72□□□□□ -1.81
PSPC1-205ENST00000497722 MRPL10Q7Z7H8 261 aaKnown RBP3.72□□□□□ -1.81
PSPC1-205ENST00000497722 TBC1D3Q8IZP1 549 aaPredicted RBP3.72□□□□□ -1.81
PSPC1-205ENST00000497722 NANOGP1Q8N7R0 232 aa3.72□□□□□ -1.81
PSPC1-205ENST00000497722 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.72□□□□□ -1.81
PSPC1-205ENST00000497722 SLC22A17Q8WUG5 538 aa3.72□□□□□ -1.81
PSPC1-205ENST00000497722 GOLGA1Q92805 767 aa3.72□□□□□ -1.81
PSPC1-205ENST00000497722 RTKNQ9BST9 563 aa3.72□□□□□ -1.81
PSPC1-205ENST00000497722 FAM167BQ9BTA0 163 aa3.72□□□□□ -1.81
PSPC1-205ENST00000497722 ELAC1Q9H777 363 aaKnown RBP3.72□□□□□ -1.81
PSPC1-205ENST00000497722 SAP30LQ9HAJ7 183 aa3.72□□□□□ -1.81
PSPC1-205ENST00000497722 BAG5Q9UL15 447 aa3.72□□□□□ -1.81
PSPC1-205ENST00000497722 PCDHB7Q9Y5E2 793 aa3.72□□□□□ -1.81
PSPC1-205ENST00000497722 MORC2Q9Y6X9 1032 aaPredicted RBP3.72□□□□□ -1.81
PSPC1-205ENST00000497722 KIF28PB7ZC32 967 aa3.71□□□□□ -1.82
PSPC1-205ENST00000497722 IFRD1O00458 451 aaPredicted RBP3.71□□□□□ -1.82
PSPC1-205ENST00000497722 PCDH17O14917 1159 aa3.71□□□□□ -1.82
PSPC1-205ENST00000497722 TLR2O60603 784 aa3.71□□□□□ -1.82
PSPC1-205ENST00000497722 PPP6R2O75170 966 aa3.71□□□□□ -1.82
PSPC1-205ENST00000497722 EIF3JO75822 258 aaKnown RBP3.71□□□□□ -1.82
PSPC1-205ENST00000497722 CER1O95813 267 aa3.71□□□□□ -1.82
PSPC1-205ENST00000497722 ITGA5P08648 1049 aa3.71□□□□□ -1.82
PSPC1-205ENST00000497722 MATN1P21941 496 aa3.71□□□□□ -1.82
PSPC1-205ENST00000497722 SLC8A1P32418 973 aa3.71□□□□□ -1.82
PSPC1-205ENST00000497722 CCT4P50991 539 aaKnown RBP3.71□□□□□ -1.82
PSPC1-205ENST00000497722 WDR5P61964 334 aaKnown RBP3.71□□□□□ -1.82
PSPC1-205ENST00000497722 RAE1P78406 368 aaKnown RBP3.71□□□□□ -1.82
PSPC1-205ENST00000497722 GHRHRQ02643 423 aa3.71□□□□□ -1.82
PSPC1-205ENST00000497722 FHL1Q13642 323 aa3.71□□□□□ -1.82
PSPC1-205ENST00000497722 KCNJ12Q14500 433 aa3.71□□□□□ -1.82
PSPC1-205ENST00000497722 RBMS2Q15434 407 aaKnown RBP3.71□□□□□ -1.82
PSPC1-205ENST00000497722 ZNF260Q3ZCT1 412 aa3.71□□□□□ -1.82
PSPC1-205ENST00000497722 LEXMQ3ZCV2 418 aa3.71□□□□□ -1.82
PSPC1-205ENST00000497722 FAM83BQ5T0W9 1011 aa3.71□□□□□ -1.82
PSPC1-205ENST00000497722 SHC4Q6S5L8 630 aa3.71□□□□□ -1.82
PSPC1-205ENST00000497722 CRELD2Q6UXH1 353 aaPredicted RBP3.71□□□□□ -1.82
PSPC1-205ENST00000497722 RANBP10Q6VN20 620 aa3.71□□□□□ -1.82
PSPC1-205ENST00000497722 RINLQ6ZS11 566 aa3.71□□□□□ -1.82
PSPC1-205ENST00000497722 RAB11FIP2Q7L804 512 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms