RNA–Protein interactions for RNA: ENST00000496818.2

CACNA1C-229, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2

Gene CACNA1C, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-229ENST00000496818 TMEM9BQ9NQ34 198 aa6.12□□□□□ -1.43
CACNA1C-229ENST00000496818 RXFP3Q9NSD7 469 aa6.12□□□□□ -1.43
CACNA1C-229ENST00000496818 DDX43Q9NXZ2 648 aaKnown RBP6.12□□□□□ -1.43
CACNA1C-229ENST00000496818 RBAKQ9NYW8 714 aaPredicted RBP6.12□□□□□ -1.43
CACNA1C-229ENST00000496818 BCCIPQ9P287 314 aaKnown RBP eCLIP6.12□□□□□ -1.43
CACNA1C-229ENST00000496818 EBF1Q9UH73 591 aa6.12□□□□□ -1.43
CACNA1C-229ENST00000496818 PCOLCE2Q9UKZ9 415 aa6.12□□□□□ -1.43
CACNA1C-229ENST00000496818 PYCARDQ9ULZ3 195 aa6.12□□□□□ -1.43
CACNA1C-229ENST00000496818 PCDHB10Q9UN67 800 aa6.12□□□□□ -1.43
CACNA1C-229ENST00000496818 WNT6Q9Y6F9 365 aa6.12□□□□□ -1.43
CACNA1C-229ENST00000496818 VPS13AQ96RL7 3174 aa6.11□□□□□ -1.43
CACNA1C-229ENST00000496818 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.11□□□□□ -1.43
CACNA1C-229ENST00000496818 A0A1W2PQH9 124 aa6.11□□□□□ -1.43
CACNA1C-229ENST00000496818 BCLAF3A2AJT9 711 aaKnown RBP6.11□□□□□ -1.43
CACNA1C-229ENST00000496818 C4orf47A7E2U8 309 aa6.11□□□□□ -1.43
CACNA1C-229ENST00000496818 C1QTNF9BB2RNN3 333 aa6.11□□□□□ -1.43
CACNA1C-229ENST00000496818 NRDCO43847 1150 aa6.11□□□□□ -1.43
CACNA1C-229ENST00000496818 TADA3O75528 432 aa6.11□□□□□ -1.43
CACNA1C-229ENST00000496818 CLSTN1O94985 981 aa6.11□□□□□ -1.43
CACNA1C-229ENST00000496818 LDHAP00338 332 aaKnown RBP6.11□□□□□ -1.43
CACNA1C-229ENST00000496818 ITGB3P05106 788 aa6.11□□□□□ -1.43
CACNA1C-229ENST00000496818 KRT19P08727 400 aa6.11□□□□□ -1.43
CACNA1C-229ENST00000496818 HMGA1P17096 107 aaKnown RBP6.11□□□□□ -1.43
CACNA1C-229ENST00000496818 PFKLP17858 780 aa6.11□□□□□ -1.43
CACNA1C-229ENST00000496818 RDXP35241 583 aaKnown RBP6.11□□□□□ -1.43
CACNA1C-229ENST00000496818 LONP1P36776 959 aaKnown RBP6.11□□□□□ -1.43
CACNA1C-229ENST00000496818 LHX1P48742 406 aa6.11□□□□□ -1.43
CACNA1C-229ENST00000496818 GPR15P49685 360 aa6.11□□□□□ -1.43
CACNA1C-229ENST00000496818 CDR1P51861 262 aa6.11□□□□□ -1.43
CACNA1C-229ENST00000496818 ATXN3P54252 364 aaPredicted RBP6.11□□□□□ -1.43
CACNA1C-229ENST00000496818 GTF2BQ00403 316 aa6.11□□□□□ -1.43
CACNA1C-229ENST00000496818 CEBPZQ03701 1054 aaKnown RBP6.11□□□□□ -1.43
CACNA1C-229ENST00000496818 MYO1EQ12965 1108 aa6.11□□□□□ -1.43
CACNA1C-229ENST00000496818 ALCAMQ13740 583 aa6.11□□□□□ -1.43
CACNA1C-229ENST00000496818 MAPRE1Q15691 268 aaKnown RBP6.11□□□□□ -1.43
CACNA1C-229ENST00000496818 CFAP221Q4G0U5 840 aa6.11□□□□□ -1.43
CACNA1C-229ENST00000496818 HSF5Q4G112 596 aaPredicted RBP6.11□□□□□ -1.43
CACNA1C-229ENST00000496818 SLC6A19Q695T7 634 aa6.11□□□□□ -1.43
CACNA1C-229ENST00000496818 SLC39A4Q6P5W5 647 aa6.11□□□□□ -1.43
CACNA1C-229ENST00000496818 UNC5AQ6ZN44 842 aa6.11□□□□□ -1.43
CACNA1C-229ENST00000496818 C11orf57Q6ZUT1 292 aaPredicted RBP6.11□□□□□ -1.43
CACNA1C-229ENST00000496818 STXBP4Q6ZWJ1 553 aa6.11□□□□□ -1.43
CACNA1C-229ENST00000496818 CD163Q86VB7 1156 aa6.11□□□□□ -1.43
CACNA1C-229ENST00000496818 TTC30AQ86WT1 665 aa6.11□□□□□ -1.43
CACNA1C-229ENST00000496818 SFR1Q86XK3 245 aa6.11□□□□□ -1.43
CACNA1C-229ENST00000496818 BRSK2Q8IWQ3 736 aa6.11□□□□□ -1.43
CACNA1C-229ENST00000496818 SCN4BQ8IWT1 228 aa6.11□□□□□ -1.43
CACNA1C-229ENST00000496818 EFCAB13Q8IY85 973 aa6.11□□□□□ -1.43
CACNA1C-229ENST00000496818 ARMC10Q8N2F6 343 aa6.11□□□□□ -1.43
CACNA1C-229ENST00000496818 TOP6BLQ8N6T0 577 aa6.11□□□□□ -1.43
CACNA1C-229ENST00000496818 LRRC52Q8N7C0 313 aa6.11□□□□□ -1.43
CACNA1C-229ENST00000496818 SPC24Q8NBT2 197 aa6.11□□□□□ -1.43
CACNA1C-229ENST00000496818 STKLD1Q8NE28 680 aa6.11□□□□□ -1.43
CACNA1C-229ENST00000496818 BAHD1Q8TBE0 780 aaPredicted RBP6.11□□□□□ -1.43
CACNA1C-229ENST00000496818 NOC3LQ8WTT2 800 aaKnown RBP6.11□□□□□ -1.43
CACNA1C-229ENST00000496818 CACTINQ8WUQ7 758 aaKnown RBP6.11□□□□□ -1.43
CACNA1C-229ENST00000496818 CHFRQ96EP1 664 aa6.11□□□□□ -1.43
CACNA1C-229ENST00000496818 FAM46AQ96IP4 442 aaKnown RBP6.11□□□□□ -1.43
CACNA1C-229ENST00000496818 ANKRD36BP1Q96IX9 119 aa6.11□□□□□ -1.43
CACNA1C-229ENST00000496818 TM9SF2Q99805 663 aa6.11□□□□□ -1.43
CACNA1C-229ENST00000496818 ACBD6Q9BR61 282 aa6.11□□□□□ -1.43
CACNA1C-229ENST00000496818 NUSAP1Q9BXS6 441 aaKnown RBP6.11□□□□□ -1.43
CACNA1C-229ENST00000496818 TPSD1Q9BZJ3 242 aa6.11□□□□□ -1.43
CACNA1C-229ENST00000496818 DUSP15Q9H1R2 295 aaPredicted RBP6.11□□□□□ -1.43
CACNA1C-229ENST00000496818 SEMA6CQ9H3T2 930 aa6.11□□□□□ -1.43
CACNA1C-229ENST00000496818 ST6GALNAC4Q9H4F1 302 aa6.11□□□□□ -1.43
CACNA1C-229ENST00000496818 ACSS3Q9H6R3 686 aa6.11□□□□□ -1.43
CACNA1C-229ENST00000496818 MRPL44Q9H9J2 332 aaKnown RBP6.11□□□□□ -1.43
CACNA1C-229ENST00000496818 CALCOCO1Q9P1Z2 691 aa6.11□□□□□ -1.43
CACNA1C-229ENST00000496818 SEL1LQ9UBV2 794 aa6.11□□□□□ -1.43
CACNA1C-229ENST00000496818 STK17AQ9UEE5 414 aa6.11□□□□□ -1.43
CACNA1C-229ENST00000496818 ITGA11Q9UKX5 1188 aa6.11□□□□□ -1.43
CACNA1C-229ENST00000496818 PCDHA7Q9UN72 937 aa6.11□□□□□ -1.43
CACNA1C-229ENST00000496818 ARHGAP26Q9UNA1 814 aa6.11□□□□□ -1.43
CACNA1C-229ENST00000496818 SNX9Q9Y5X1 595 aa6.11□□□□□ -1.43
CACNA1C-229ENST00000496818 FANCMQ8IYD8 2048 aa6.11□□□□□ -1.43
CACNA1C-229ENST00000496818 OTOGLQ3ZCN5 2332 aa6.1□□□□□ -1.43
CACNA1C-229ENST00000496818 ZFHX4Q86UP3 3567 aa6.1□□□□□ -1.43
CACNA1C-229ENST00000496818 TICRRQ7Z2Z1 1910 aa6.1□□□□□ -1.43
CACNA1C-229ENST00000496818 FAM237AA0A1B0GTK4 181 aa6.1□□□□□ -1.43
CACNA1C-229ENST00000496818 OTOL1A6NHN0 477 aaPredicted RBP6.1□□□□□ -1.43
CACNA1C-229ENST00000496818 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.1□□□□□ -1.43
CACNA1C-229ENST00000496818 B2RBV5 119 aa6.1□□□□□ -1.43
CACNA1C-229ENST00000496818 SLC9A3R1O14745 358 aaPredicted RBP6.1□□□□□ -1.43
CACNA1C-229ENST00000496818 KIAA0391O15091 583 aaKnown RBP6.1□□□□□ -1.43
CACNA1C-229ENST00000496818 SPTLC2O15270 562 aa6.1□□□□□ -1.43
CACNA1C-229ENST00000496818 CCP110O43303 1012 aa6.1□□□□□ -1.43
CACNA1C-229ENST00000496818 ATP8B1O43520 1251 aa6.1□□□□□ -1.43
CACNA1C-229ENST00000496818 PPP6R2O75170 966 aa6.1□□□□□ -1.43
CACNA1C-229ENST00000496818 GCNT3O95395 438 aa6.1□□□□□ -1.43
CACNA1C-229ENST00000496818 C1QTNF9P0C862 333 aa6.1□□□□□ -1.43
CACNA1C-229ENST00000496818 CEACAM1P13688 526 aa6.1□□□□□ -1.43
CACNA1C-229ENST00000496818 GAP43P17677 238 aa6.1□□□□□ -1.43
CACNA1C-229ENST00000496818 CSRP1P21291 193 aaKnown RBP6.1□□□□□ -1.43
CACNA1C-229ENST00000496818 CMA1P23946 247 aa6.1□□□□□ -1.43
CACNA1C-229ENST00000496818 ACAT1P24752 427 aaKnown RBP6.1□□□□□ -1.43
CACNA1C-229ENST00000496818 MAP4P27816 1152 aaKnown RBP6.1□□□□□ -1.43
CACNA1C-229ENST00000496818 EIF2DP41214 584 aaKnown RBP6.1□□□□□ -1.43
CACNA1C-229ENST00000496818 DHPSP49366 369 aaPredicted RBP6.1□□□□□ -1.43
CACNA1C-229ENST00000496818 GALK1P51570 392 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms