RNA–Protein interactions for RNA: ENST00000496622.1

SSBP1-213, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 2,620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-213ENST00000496622 ATP2C2O75185 946 aa6.4□□□□□ -1.39
SSBP1-213ENST00000496622 SMIM24O75264 130 aa6.4□□□□□ -1.39
SSBP1-213ENST00000496622 CILPO75339 1184 aa6.4□□□□□ -1.39
SSBP1-213ENST00000496622 BAIAP3O94812 1187 aa6.4□□□□□ -1.39
SSBP1-213ENST00000496622 LINGO3P0C6S8 592 aa6.4□□□□□ -1.39
SSBP1-213ENST00000496622 IDO1P14902 403 aa6.4□□□□□ -1.39
SSBP1-213ENST00000496622 MMP8P22894 467 aa6.4□□□□□ -1.39
SSBP1-213ENST00000496622 ACAT1P24752 427 aaKnown RBP6.4□□□□□ -1.39
SSBP1-213ENST00000496622 PSMA3P25788 255 aa6.4□□□□□ -1.39
SSBP1-213ENST00000496622 COPAP53621 1224 aa6.4□□□□□ -1.39
SSBP1-213ENST00000496622 PSMA6P60900 246 aaKnown RBP6.4□□□□□ -1.39
SSBP1-213ENST00000496622 HLTFQ14527 1009 aaKnown RBP eCLIP6.4□□□□□ -1.39
SSBP1-213ENST00000496622 TRIP13Q15645 432 aaPredicted RBP6.4□□□□□ -1.39
SSBP1-213ENST00000496622 FAM209AQ5JX71 171 aa6.4□□□□□ -1.39
SSBP1-213ENST00000496622 GKAP1Q5VSY0 366 aaPredicted RBP6.4□□□□□ -1.39
SSBP1-213ENST00000496622 NUGGCQ68CJ6 796 aa6.4□□□□□ -1.39
SSBP1-213ENST00000496622 TTC27Q6P3X3 843 aa6.4□□□□□ -1.39
SSBP1-213ENST00000496622 RTL10Q7L3V2 364 aa6.4□□□□□ -1.39
SSBP1-213ENST00000496622 RAB44Q7Z6P3 723 aaPredicted RBP6.4□□□□□ -1.39
SSBP1-213ENST00000496622 ZNF410Q86VK4 478 aa6.4□□□□□ -1.39
SSBP1-213ENST00000496622 ALDH16A1Q8IZ83 802 aa6.4□□□□□ -1.39
SSBP1-213ENST00000496622 FAM9CQ8IZT9 166 aa6.4□□□□□ -1.39
SSBP1-213ENST00000496622 ARHGAP18Q8N392 663 aa6.4□□□□□ -1.39
SSBP1-213ENST00000496622 MMGT1Q8N4V1 131 aa6.4□□□□□ -1.39
SSBP1-213ENST00000496622 SMG8Q8ND04 991 aaKnown RBP6.4□□□□□ -1.39
SSBP1-213ENST00000496622 CASKIN2Q8WXE0 1202 aa6.4□□□□□ -1.39
SSBP1-213ENST00000496622 NDRG1Q92597 394 aaKnown RBP6.4□□□□□ -1.39
SSBP1-213ENST00000496622 CD101Q93033 1021 aa6.4□□□□□ -1.39
SSBP1-213ENST00000496622 HAUS1Q96CS2 278 aa6.4□□□□□ -1.39
SSBP1-213ENST00000496622 GAD1Q99259 594 aa6.4□□□□□ -1.39
SSBP1-213ENST00000496622 SELENOOQ9BVL4 669 aa6.4□□□□□ -1.39
SSBP1-213ENST00000496622 B3GNT4Q9C0J1 378 aa6.4□□□□□ -1.39
SSBP1-213ENST00000496622 C10orf88Q9H8K7 445 aa6.4□□□□□ -1.39
SSBP1-213ENST00000496622 PLEKHA5Q9HAU0 1116 aa6.4□□□□□ -1.39
SSBP1-213ENST00000496622 INIPQ9NRY2 104 aa6.4□□□□□ -1.39
SSBP1-213ENST00000496622 MIOSQ9NXC5 875 aa6.4□□□□□ -1.39
SSBP1-213ENST00000496622 TMEM59LQ9UK28 342 aa6.4□□□□□ -1.39
SSBP1-213ENST00000496622 CNTN6Q9UQ52 1028 aa6.4□□□□□ -1.39
SSBP1-213ENST00000496622 CACNA1BQ00975 2339 aa6.39□□□□□ -1.39
SSBP1-213ENST00000496622 ARPC4-TTLL3A0A0A6YYG9 625 aa6.39□□□□□ -1.39
SSBP1-213ENST00000496622 A6NCN8 305 aa6.39□□□□□ -1.39
SSBP1-213ENST00000496622 M0QYV0 167 aa6.39□□□□□ -1.39
SSBP1-213ENST00000496622 SEPT4O43236 478 aa6.39□□□□□ -1.39
SSBP1-213ENST00000496622 ADAMTS4O75173 837 aa6.39□□□□□ -1.39
SSBP1-213ENST00000496622 FGFR1P11362 822 aa6.39□□□□□ -1.39
SSBP1-213ENST00000496622 CD33P20138 364 aa6.39□□□□□ -1.39
SSBP1-213ENST00000496622 CD52P31358 61 aa6.39□□□□□ -1.39
SSBP1-213ENST00000496622 VPS41P49754 854 aa6.39□□□□□ -1.39
SSBP1-213ENST00000496622 PTPN11Q06124 597 aaPredicted RBP6.39□□□□□ -1.39
SSBP1-213ENST00000496622 BRD3Q15059 726 aa6.39□□□□□ -1.39
SSBP1-213ENST00000496622 OCLNQ16625 522 aa6.39□□□□□ -1.39
SSBP1-213ENST00000496622 SOWAHAQ2M3V2 549 aa6.39□□□□□ -1.39
SSBP1-213ENST00000496622 CFAP157Q5JU67 520 aa6.39□□□□□ -1.39
SSBP1-213ENST00000496622 TMTC4Q5T4D3 741 aa6.39□□□□□ -1.39
SSBP1-213ENST00000496622 UBAP2Q5T6F2 1119 aaKnown RBP6.39□□□□□ -1.39
SSBP1-213ENST00000496622 MFSD14CQ5VZR4 134 aa6.39□□□□□ -1.39
SSBP1-213ENST00000496622 WDR93Q6P2C0 686 aa6.39□□□□□ -1.39
SSBP1-213ENST00000496622 NEK5Q6P3R8 708 aa6.39□□□□□ -1.39
SSBP1-213ENST00000496622 CCDC50Q8IVM0 306 aa6.39□□□□□ -1.39
SSBP1-213ENST00000496622 PRELID2Q8N945 189 aa6.39□□□□□ -1.39
SSBP1-213ENST00000496622 GSTCDQ8NEC7 633 aa6.39□□□□□ -1.39
SSBP1-213ENST00000496622 OR6B3Q8NGW1 331 aa6.39□□□□□ -1.39
SSBP1-213ENST00000496622 EPS8L3Q8TE67 593 aaKnown RBP6.39□□□□□ -1.39
SSBP1-213ENST00000496622 MAGEB5Q9BZ81 275 aa6.39□□□□□ -1.39
SSBP1-213ENST00000496622 TRPV6Q9H1D0 765 aa6.39□□□□□ -1.39
SSBP1-213ENST00000496622 RABEP2Q9H5N1 569 aa6.39□□□□□ -1.39
SSBP1-213ENST00000496622 ASB7Q9H672 318 aa6.39□□□□□ -1.39
SSBP1-213ENST00000496622 LRRC4CQ9HCJ2 640 aa6.39□□□□□ -1.39
SSBP1-213ENST00000496622 FKBP14Q9NWM8 211 aa6.39□□□□□ -1.39
SSBP1-213ENST00000496622 GTF2IRD1Q9UHL9 959 aa6.39□□□□□ -1.39
SSBP1-213ENST00000496622 MTUS1Q9ULD2 1270 aa6.39□□□□□ -1.39
SSBP1-213ENST00000496622 TRIM17Q9Y577 477 aa6.39□□□□□ -1.39
SSBP1-213ENST00000496622 PCDHGB3Q9Y5G1 929 aa6.39□□□□□ -1.39
SSBP1-213ENST00000496622 FAM169AQ9Y6X4 670 aa6.39□□□□□ -1.39
SSBP1-213ENST00000496622 KAT6AQ92794 2004 aa6.39□□□□□ -1.39
SSBP1-213ENST00000496622 COL1A2P08123 1366 aa6.39□□□□□ -1.39
SSBP1-213ENST00000496622 PTGESO14684 152 aa6.39□□□□□ -1.39
SSBP1-213ENST00000496622 DIAPH2O60879 1101 aa6.39□□□□□ -1.39
SSBP1-213ENST00000496622 MICAL2O94851 1124 aa6.39□□□□□ -1.39
SSBP1-213ENST00000496622 TMCC1O94876 653 aa6.39□□□□□ -1.39
SSBP1-213ENST00000496622 IL18RAPO95256 599 aa6.39□□□□□ -1.39
SSBP1-213ENST00000496622 MAP3K6O95382 1288 aa6.39□□□□□ -1.39
SSBP1-213ENST00000496622 STAMBPO95630 424 aa6.39□□□□□ -1.39
SSBP1-213ENST00000496622 POMCP01189 267 aa6.39□□□□□ -1.39
SSBP1-213ENST00000496622 ERBB2P04626 1255 aa6.39□□□□□ -1.39
SSBP1-213ENST00000496622 MYBL1P10243 752 aa6.39□□□□□ -1.39
SSBP1-213ENST00000496622 RARAP10276 462 aa6.39□□□□□ -1.39
SSBP1-213ENST00000496622 CCDC130P13994 396 aa6.39□□□□□ -1.39
SSBP1-213ENST00000496622 ATP5DP30049 168 aa6.39□□□□□ -1.39
SSBP1-213ENST00000496622 ETV3P41162 512 aa6.39□□□□□ -1.39
SSBP1-213ENST00000496622 CTBSQ01459 385 aa6.39□□□□□ -1.39
SSBP1-213ENST00000496622 GSTM4Q03013 218 aa6.39□□□□□ -1.39
SSBP1-213ENST00000496622 MTM1Q13496 603 aa6.39□□□□□ -1.39
SSBP1-213ENST00000496622 CDO1Q16878 200 aa6.39□□□□□ -1.39
SSBP1-213ENST00000496622 SKIDA1Q1XH10 827 aa6.39□□□□□ -1.39
SSBP1-213ENST00000496622 DCUN1D2Q6PH85 259 aa6.39□□□□□ -1.39
SSBP1-213ENST00000496622 JAZF1Q86VZ6 243 aa6.39□□□□□ -1.39
SSBP1-213ENST00000496622 ERICH1Q86X53 443 aa6.39□□□□□ -1.39
SSBP1-213ENST00000496622 PGBD3Q8N328 593 aa6.39□□□□□ -1.39
SSBP1-213ENST00000496622 GOLM1Q8NBJ4 401 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms