RNA–Protein interactions for RNA: ENST00000496458.1

SF3B1-212, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 475 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-212ENST00000496458 AQP12BA6NM10 295 aa6.47□□□□□ -1.37
SF3B1-212ENST00000496458 CER1O95813 267 aa6.47□□□□□ -1.37
SF3B1-212ENST00000496458 KLRK1P26718 216 aa6.47□□□□□ -1.37
SF3B1-212ENST00000496458 AKT1P31749 480 aa6.47□□□□□ -1.37
SF3B1-212ENST00000496458 SOX2P48431 317 aa6.47□□□□□ -1.37
SF3B1-212ENST00000496458 LAMB3Q13751 1172 aa6.47□□□□□ -1.37
SF3B1-212ENST00000496458 GLE1Q53GS7 698 aaKnown RBP6.47□□□□□ -1.37
SF3B1-212ENST00000496458 ANKRD40Q6AI12 368 aa6.47□□□□□ -1.37
SF3B1-212ENST00000496458 FAM57BQ71RH2 274 aa6.47□□□□□ -1.37
SF3B1-212ENST00000496458 PIP4P1Q86T03 277 aa6.47□□□□□ -1.37
SF3B1-212ENST00000496458 SKAP1Q86WV1 359 aa6.47□□□□□ -1.37
SF3B1-212ENST00000496458 RHPN2Q8IUC4 686 aa6.47□□□□□ -1.37
SF3B1-212ENST00000496458 ZNF366Q8N895 744 aa6.47□□□□□ -1.37
SF3B1-212ENST00000496458 ZBTB9Q96C00 473 aa6.47□□□□□ -1.37
SF3B1-212ENST00000496458 TMEM41AQ96HV5 264 aa6.47□□□□□ -1.37
SF3B1-212ENST00000496458 FAR2Q96K12 515 aa6.47□□□□□ -1.37
SF3B1-212ENST00000496458 FOXP1Q9H334 677 aaPredicted RBP6.47□□□□□ -1.37
SF3B1-212ENST00000496458 MOV10Q9HCE1 1003 aaKnown RBP6.47□□□□□ -1.37
SF3B1-212ENST00000496458 KCNK9Q9NPC2 374 aa6.47□□□□□ -1.37
SF3B1-212ENST00000496458 SLC52A1Q9NWF4 448 aa6.47□□□□□ -1.37
SF3B1-212ENST00000496458 MAGED2Q9UNF1 606 aaPredicted RBP6.47□□□□□ -1.37
SF3B1-212ENST00000496458 B3GNT3Q9Y2A9 372 aa6.47□□□□□ -1.37
SF3B1-212ENST00000496458 LY6G6EA0A0G2JKS1 128 aa6.46□□□□□ -1.38
SF3B1-212ENST00000496458 M0QYT0 321 aa6.46□□□□□ -1.38
SF3B1-212ENST00000496458 ASNA1O43681 348 aa6.46□□□□□ -1.38
SF3B1-212ENST00000496458 ENO1P06733 434 aaKnown RBP6.46□□□□□ -1.38
SF3B1-212ENST00000496458 AKR1A1P14550 325 aa6.46□□□□□ -1.38
SF3B1-212ENST00000496458 TFEBP19484 476 aa6.46□□□□□ -1.38
SF3B1-212ENST00000496458 SERPINB3P29508 390 aa6.46□□□□□ -1.38
SF3B1-212ENST00000496458 ANXA2RQ3ZCQ2 193 aa6.46□□□□□ -1.38
SF3B1-212ENST00000496458 RINT1Q6NUQ1 792 aa6.46□□□□□ -1.38
SF3B1-212ENST00000496458 ADGRF4Q8IZF3 695 aa6.46□□□□□ -1.38
SF3B1-212ENST00000496458 PRDM16Q9HAZ2 1276 aa6.46□□□□□ -1.38
SF3B1-212ENST00000496458 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.46□□□□□ -1.38
SF3B1-212ENST00000496458 EMSYQ7Z589 1322 aa6.46□□□□□ -1.38
SF3B1-212ENST00000496458 RPP40O75818 363 aaKnown RBP6.45□□□□□ -1.38
SF3B1-212ENST00000496458 KAT7O95251 611 aa6.45□□□□□ -1.38
SF3B1-212ENST00000496458 TMEM191BP0C7N4 346 aa6.45□□□□□ -1.38
SF3B1-212ENST00000496458 CCT4P50991 539 aaKnown RBP6.45□□□□□ -1.38
SF3B1-212ENST00000496458 SRSF1Q07955 248 aaKnown RBP eCLIP6.45□□□□□ -1.38
SF3B1-212ENST00000496458 MTX1Q13505 466 aa6.45□□□□□ -1.38
SF3B1-212ENST00000496458 AAK1Q2M2I8 961 aa6.45□□□□□ -1.38
SF3B1-212ENST00000496458 ZNF260Q3ZCT1 412 aa6.45□□□□□ -1.38
SF3B1-212ENST00000496458 GATAD2AQ86YP4 633 aa6.45□□□□□ -1.38
SF3B1-212ENST00000496458 ZNF548Q8NEK5 533 aaPredicted RBP6.45□□□□□ -1.38
SF3B1-212ENST00000496458 BCAS4Q8TDM0 211 aa6.45□□□□□ -1.38
SF3B1-212ENST00000496458 KAT2BQ92831 832 aa6.45□□□□□ -1.38
SF3B1-212ENST00000496458 ZFYVE19Q96K21 471 aa6.45□□□□□ -1.38
SF3B1-212ENST00000496458 SPATA31A5Q5VU36 1347 aa6.45□□□□□ -1.38
SF3B1-212ENST00000496458 SPATA31A7Q8IWB4 1347 aa6.45□□□□□ -1.38
SF3B1-212ENST00000496458 LOC105369274A0A096LPK9 316 aa6.44□□□□□ -1.38
SF3B1-212ENST00000496458 LOC102723532A0A0G2JNH3 316 aa6.44□□□□□ -1.38
SF3B1-212ENST00000496458 F8W810 466 aa6.44□□□□□ -1.38
SF3B1-212ENST00000496458 DNPH1O43598 174 aa6.44□□□□□ -1.38
SF3B1-212ENST00000496458 UGDHO60701 494 aa6.44□□□□□ -1.38
SF3B1-212ENST00000496458 PEPDP12955 493 aa6.44□□□□□ -1.38
SF3B1-212ENST00000496458 IL6STP40189 918 aaPredicted RBP6.44□□□□□ -1.38
SF3B1-212ENST00000496458 SLC37A1P57057 533 aa6.44□□□□□ -1.38
SF3B1-212ENST00000496458 AWAT2Q6E213 333 aa6.44□□□□□ -1.38
SF3B1-212ENST00000496458 WDR93Q6P2C0 686 aa6.44□□□□□ -1.38
SF3B1-212ENST00000496458 GGT6Q6P531 493 aa6.44□□□□□ -1.38
SF3B1-212ENST00000496458 IRF2BP2Q7Z5L9 587 aa6.44□□□□□ -1.38
SF3B1-212ENST00000496458 TECPR1Q7Z6L1 1165 aa6.44□□□□□ -1.38
SF3B1-212ENST00000496458 TRABD2AQ86V40 505 aa6.44□□□□□ -1.38
SF3B1-212ENST00000496458 MORC1Q86VD1 984 aa6.44□□□□□ -1.38
SF3B1-212ENST00000496458 NRSN1Q8IZ57 195 aa6.44□□□□□ -1.38
SF3B1-212ENST00000496458 OR4N4Q8N0Y3 316 aa6.44□□□□□ -1.38
SF3B1-212ENST00000496458 ARFGAP1Q8N6T3 406 aa6.44□□□□□ -1.38
SF3B1-212ENST00000496458 SRFBP1Q8NEF9 429 aaKnown RBP6.44□□□□□ -1.38
SF3B1-212ENST00000496458 STYXQ8WUJ0 223 aa6.44□□□□□ -1.38
SF3B1-212ENST00000496458 WDR60Q8WVS4 1066 aa6.44□□□□□ -1.38
SF3B1-212ENST00000496458 TRMOQ9BU70 441 aa6.44□□□□□ -1.38
SF3B1-212ENST00000496458 ABHD14AQ9BUJ0 271 aa6.44□□□□□ -1.38
SF3B1-212ENST00000496458 IPO11Q9UI26 975 aaKnown RBP6.44□□□□□ -1.38
SF3B1-212ENST00000496458 HS3ST3B1Q9Y662 390 aa6.44□□□□□ -1.38
SF3B1-212ENST00000496458 NKX2-8O15522 239 aa6.43□□□□□ -1.38
SF3B1-212ENST00000496458 RFPL3SP0C7P2 107 aa6.43□□□□□ -1.38
SF3B1-212ENST00000496458 ME1P48163 572 aa6.43□□□□□ -1.38
SF3B1-212ENST00000496458 LIPMQ5VYY2 423 aa6.43□□□□□ -1.38
SF3B1-212ENST00000496458 ZNF474Q6S9Z5 364 aaPredicted RBP6.43□□□□□ -1.38
SF3B1-212ENST00000496458 ZFPM2Q8WW38 1151 aa6.43□□□□□ -1.38
SF3B1-212ENST00000496458 REXO5Q96IC2 774 aaKnown RBP6.43□□□□□ -1.38
SF3B1-212ENST00000496458 PAPOLBQ9NRJ5 636 aaKnown RBP6.43□□□□□ -1.38
SF3B1-212ENST00000496458 LRCH1Q9Y2L9 728 aa6.43□□□□□ -1.38
SF3B1-212ENST00000496458 GOLGA6L3A6NEY3 463 aa6.42□□□□□ -1.38
SF3B1-212ENST00000496458 KIF28PB7ZC32 967 aa6.42□□□□□ -1.38
SF3B1-212ENST00000496458 FFAR2O15552 330 aa6.42□□□□□ -1.38
SF3B1-212ENST00000496458 PPP6R2O75170 966 aa6.42□□□□□ -1.38
SF3B1-212ENST00000496458 CNTN5O94779 1100 aa6.42□□□□□ -1.38
SF3B1-212ENST00000496458 TNFRSF6BO95407 300 aa6.42□□□□□ -1.38
SF3B1-212ENST00000496458 TAS2R50P59544 299 aa6.42□□□□□ -1.38
SF3B1-212ENST00000496458 B4GALNT1Q00973 533 aa6.42□□□□□ -1.38
SF3B1-212ENST00000496458 SPARCL1Q14515 664 aa6.42□□□□□ -1.38
SF3B1-212ENST00000496458 PGM5Q15124 567 aa6.42□□□□□ -1.38
SF3B1-212ENST00000496458 SLC39A5Q6ZMH5 540 aa6.42□□□□□ -1.38
SF3B1-212ENST00000496458 ARL14EPQ8N8R7 260 aaPredicted RBP6.42□□□□□ -1.38
SF3B1-212ENST00000496458 ZNF527Q8NB42 609 aa6.42□□□□□ -1.38
SF3B1-212ENST00000496458 FAM71BQ8TC56 605 aa6.42□□□□□ -1.38
SF3B1-212ENST00000496458 TUBB6Q9BUF5 446 aa6.42□□□□□ -1.38
SF3B1-212ENST00000496458 ZNF700Q9H0M5 742 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms