RNA–Protein interactions for RNA: ENST00000495619.1

NCKAP1-208, Transcript of NCK associated protein 1, humanhuman

TSL 3

Gene NCKAP1, Length 665 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-208ENST00000495619 AFG3L2Q9Y4W6 797 aa6□□□□□ -1.45
NCKAP1-208ENST00000495619 HS3ST3B1Q9Y662 390 aa6□□□□□ -1.45
NCKAP1-208ENST00000495619 GOLGA6L3A6NEY3 463 aa5.99□□□□□ -1.45
NCKAP1-208ENST00000495619 CNOT3O75175 753 aaKnown RBP5.99□□□□□ -1.45
NCKAP1-208ENST00000495619 SETSIPP0DME0 302 aa5.99□□□□□ -1.45
NCKAP1-208ENST00000495619 ST6GAL1P15907 406 aa5.99□□□□□ -1.45
NCKAP1-208ENST00000495619 HOXD9P28356 352 aaPredicted RBP5.99□□□□□ -1.45
NCKAP1-208ENST00000495619 MSANTD2Q6P1R3 559 aa5.99□□□□□ -1.45
NCKAP1-208ENST00000495619 RINLQ6ZS11 566 aa5.99□□□□□ -1.45
NCKAP1-208ENST00000495619 PIM3Q86V86 326 aa5.99□□□□□ -1.45
NCKAP1-208ENST00000495619 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.99□□□□□ -1.45
NCKAP1-208ENST00000495619 ARFGAP1Q8N6T3 406 aa5.99□□□□□ -1.45
NCKAP1-208ENST00000495619 SLC22A17Q8WUG5 538 aa5.99□□□□□ -1.45
NCKAP1-208ENST00000495619 REXO5Q96IC2 774 aaKnown RBP5.99□□□□□ -1.45
NCKAP1-208ENST00000495619 ELOVL1Q9BW60 279 aa5.99□□□□□ -1.45
NCKAP1-208ENST00000495619 SCNM1Q9BWG6 230 aa5.99□□□□□ -1.45
NCKAP1-208ENST00000495619 PAPOLBQ9NRJ5 636 aaKnown RBP5.99□□□□□ -1.45
NCKAP1-208ENST00000495619 SLC8A2Q9UPR5 921 aa5.99□□□□□ -1.45
NCKAP1-208ENST00000495619 GXYLT2A0PJZ3 443 aa5.98□□□□□ -1.45
NCKAP1-208ENST00000495619 DPPA5A6NC42 116 aa5.98□□□□□ -1.45
NCKAP1-208ENST00000495619 C3orf70A6NLC5 250 aaPredicted RBP5.98□□□□□ -1.45
NCKAP1-208ENST00000495619 PRF1P14222 555 aa5.98□□□□□ -1.45
NCKAP1-208ENST00000495619 SCP2P22307 547 aa5.98□□□□□ -1.45
NCKAP1-208ENST00000495619 HOXA7P31268 230 aaPredicted RBP5.98□□□□□ -1.45
NCKAP1-208ENST00000495619 THBS4P35443 961 aa5.98□□□□□ -1.45
NCKAP1-208ENST00000495619 IDUAP35475 653 aa5.98□□□□□ -1.45
NCKAP1-208ENST00000495619 STAT6P42226 847 aa5.98□□□□□ -1.45
NCKAP1-208ENST00000495619 ZNF84P51523 738 aa5.98□□□□□ -1.45
NCKAP1-208ENST00000495619 POLGP54098 1239 aaPredicted RBP5.98□□□□□ -1.45
NCKAP1-208ENST00000495619 POLE2P56282 527 aa5.98□□□□□ -1.45
NCKAP1-208ENST00000495619 GAB1Q13480 694 aa5.98□□□□□ -1.45
NCKAP1-208ENST00000495619 LIPMQ5VYY2 423 aa5.98□□□□□ -1.45
NCKAP1-208ENST00000495619 ANKRD40Q6AI12 368 aa5.98□□□□□ -1.45
NCKAP1-208ENST00000495619 TMEM88Q6PEY1 159 aa5.98□□□□□ -1.45
NCKAP1-208ENST00000495619 TFAP2DQ7Z6R9 452 aa5.98□□□□□ -1.45
NCKAP1-208ENST00000495619 TRABD2AQ86V40 505 aa5.98□□□□□ -1.45
NCKAP1-208ENST00000495619 ZFYVE19Q96K21 471 aa5.98□□□□□ -1.45
NCKAP1-208ENST00000495619 ZNF48Q96MX3 618 aaPredicted RBP5.98□□□□□ -1.45
NCKAP1-208ENST00000495619 ABHD14AQ9BUJ0 271 aa5.98□□□□□ -1.45
NCKAP1-208ENST00000495619 SFXN1Q9H9B4 322 aa5.98□□□□□ -1.45
NCKAP1-208ENST00000495619 KCNK9Q9NPC2 374 aa5.98□□□□□ -1.45
NCKAP1-208ENST00000495619 FNIP2Q9P278 1114 aa5.98□□□□□ -1.45
NCKAP1-208ENST00000495619 SLC22A23A1A5C7 686 aa5.97□□□□□ -1.45
NCKAP1-208ENST00000495619 C16orf96A6NNT2 1141 aa5.97□□□□□ -1.45
NCKAP1-208ENST00000495619 PCDH17O14917 1159 aa5.97□□□□□ -1.45
NCKAP1-208ENST00000495619 NKX2-8O15522 239 aa5.97□□□□□ -1.45
NCKAP1-208ENST00000495619 DHHO43323 396 aa5.97□□□□□ -1.45
NCKAP1-208ENST00000495619 TULP3O75386 442 aa5.97□□□□□ -1.45
NCKAP1-208ENST00000495619 CER1O95813 267 aa5.97□□□□□ -1.45
NCKAP1-208ENST00000495619 ALDOAP04075 364 aaKnown RBP5.97□□□□□ -1.45
NCKAP1-208ENST00000495619 CYP19A1P11511 503 aaPredicted RBP5.97□□□□□ -1.45
NCKAP1-208ENST00000495619 AKT1P31749 480 aa5.97□□□□□ -1.45
NCKAP1-208ENST00000495619 IL6STP40189 918 aaPredicted RBP5.97□□□□□ -1.45
NCKAP1-208ENST00000495619 DMWDQ09019 674 aa5.97□□□□□ -1.45
NCKAP1-208ENST00000495619 AAK1Q2M2I8 961 aa5.97□□□□□ -1.45
NCKAP1-208ENST00000495619 ATPAF1Q5TC12 328 aaPredicted RBP5.97□□□□□ -1.45
NCKAP1-208ENST00000495619 SLC39A5Q6ZMH5 540 aa5.97□□□□□ -1.45
NCKAP1-208ENST00000495619 RFX6Q8HWS3 928 aa5.97□□□□□ -1.45
NCKAP1-208ENST00000495619 NPIPB3Q92617 1050 aa5.97□□□□□ -1.45
NCKAP1-208ENST00000495619 RSC1A1Q92681 617 aa5.97□□□□□ -1.45
NCKAP1-208ENST00000495619 FOXP1Q9H334 677 aaPredicted RBP5.97□□□□□ -1.45
NCKAP1-208ENST00000495619 TP63Q9H3D4 680 aaPredicted RBP5.97□□□□□ -1.45
NCKAP1-208ENST00000495619 CCDC134Q9H6E4 229 aa5.97□□□□□ -1.45
NCKAP1-208ENST00000495619 FSCN3Q9NQT6 498 aa5.97□□□□□ -1.45
NCKAP1-208ENST00000495619 CDC23Q9UJX2 597 aa5.97□□□□□ -1.45
NCKAP1-208ENST00000495619 SKAP2O75563 359 aaPredicted RBP5.96□□□□□ -1.46
NCKAP1-208ENST00000495619 LARGE1O95461 756 aa5.96□□□□□ -1.46
NCKAP1-208ENST00000495619 GRK5P34947 590 aa5.96□□□□□ -1.46
NCKAP1-208ENST00000495619 B4GALNT1Q00973 533 aa5.96□□□□□ -1.46
NCKAP1-208ENST00000495619 TNFAIP2Q03169 654 aa5.96□□□□□ -1.46
NCKAP1-208ENST00000495619 TLE3Q04726 772 aa5.96□□□□□ -1.46
NCKAP1-208ENST00000495619 GRM4Q14833 912 aa5.96□□□□□ -1.46
NCKAP1-208ENST00000495619 SYCP2LQ5T4T6 812 aa5.96□□□□□ -1.46
NCKAP1-208ENST00000495619 C16orf89Q6UX73 402 aa5.96□□□□□ -1.46
NCKAP1-208ENST00000495619 MORC1Q86VD1 984 aa5.96□□□□□ -1.46
NCKAP1-208ENST00000495619 MYLK4Q86YV6 388 aaPredicted RBP5.96□□□□□ -1.46
NCKAP1-208ENST00000495619 ZNF366Q8N895 744 aa5.96□□□□□ -1.46
NCKAP1-208ENST00000495619 SLC44A5Q8NCS7 719 aa5.96□□□□□ -1.46
NCKAP1-208ENST00000495619 GPR78Q96P69 363 aa5.96□□□□□ -1.46
NCKAP1-208ENST00000495619 B3GNT3Q9Y2A9 372 aa5.96□□□□□ -1.46
NCKAP1-208ENST00000495619 TBC1D3DA0A087WVF3 549 aa5.95□□□□□ -1.46
NCKAP1-208ENST00000495619 TBC1D3IA0A087WXS9 549 aa5.95□□□□□ -1.46
NCKAP1-208ENST00000495619 TBC1D3EA0A087X179 549 aa5.95□□□□□ -1.46
NCKAP1-208ENST00000495619 TBC1D3KA0A087X1G2 549 aa5.95□□□□□ -1.46
NCKAP1-208ENST00000495619 TBC1D3BA6NDS4 549 aa5.95□□□□□ -1.46
NCKAP1-208ENST00000495619 TBC1D3FA6NER0 549 aaPredicted RBP5.95□□□□□ -1.46
NCKAP1-208ENST00000495619 EFCAB8A8MWE9 144 aa5.95□□□□□ -1.46
NCKAP1-208ENST00000495619 TBC1D3LB9A6J9 549 aa5.95□□□□□ -1.46
NCKAP1-208ENST00000495619 UGDHO60701 494 aa5.95□□□□□ -1.46
NCKAP1-208ENST00000495619 ZC3H11AO75152 810 aaKnown RBP eCLIP5.95□□□□□ -1.46
NCKAP1-208ENST00000495619 TBC1D3HP0C7X1 549 aa5.95□□□□□ -1.46
NCKAP1-208ENST00000495619 TGM2P21980 687 aa5.95□□□□□ -1.46
NCKAP1-208ENST00000495619 HTR3AP46098 478 aa5.95□□□□□ -1.46
NCKAP1-208ENST00000495619 SOX2P48431 317 aa5.95□□□□□ -1.46
NCKAP1-208ENST00000495619 SRSF1Q07955 248 aaKnown RBP eCLIP5.95□□□□□ -1.46
NCKAP1-208ENST00000495619 MTX1Q13505 466 aa5.95□□□□□ -1.46
NCKAP1-208ENST00000495619 SPARCL1Q14515 664 aa5.95□□□□□ -1.46
NCKAP1-208ENST00000495619 MANEAQ5SRI9 462 aa5.95□□□□□ -1.46
NCKAP1-208ENST00000495619 TBC1D3GQ6DHY5 549 aa5.95□□□□□ -1.46
NCKAP1-208ENST00000495619 TBC1D3CQ6IPX1 549 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms