RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 ARCN1P48444 511 aaKnown RBP4.93□□□□□ -1.62
PRKD3-210ENST00000494667 BST2Q10589 180 aaKnown RBP4.93□□□□□ -1.62
PRKD3-210ENST00000494667 BFSP1Q12934 665 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 UBE4AQ14139 1066 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 TFDP1Q14186 410 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 KCTD19Q17RG1 926 aaPredicted RBP4.93□□□□□ -1.62
PRKD3-210ENST00000494667 LRIT3Q3SXY7 679 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 EPGNQ6UW88 154 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 CCDC81Q6ZN84 652 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 FRMD7Q6ZUT3 714 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 UNC5BQ8IZJ1 945 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 SUN5Q8TC36 379 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 ZNF384Q8TF68 577 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 PDCD6IPQ8WUM4 868 aaKnown RBP4.93□□□□□ -1.62
PRKD3-210ENST00000494667 SDR42E1Q8WUS8 393 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 ISL2Q96A47 359 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 CSRNP1Q96S65 589 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 SLC39A3Q9BRY0 314 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 KANSL2Q9H9L4 492 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 CNNM1Q9NRU3 951 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 PKD2L1Q9P0L9 805 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 KCNN3Q9UGI6 736 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 NIP7Q9Y221 180 aaKnown RBP eCLIP4.93□□□□□ -1.62
PRKD3-210ENST00000494667 NAALAD2Q9Y3Q0 740 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 MINDY4BA8MYZ0 360 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 ERVV-1B6SEH8 477 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 CDK2AP1O14519 115 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 DYRK3O43781 588 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 CAPN15O75808 1086 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 KRT75O95678 551 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 EGFRP00533 1210 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 SNRPAP09012 282 aaKnown RBP4.93□□□□□ -1.62
PRKD3-210ENST00000494667 TRAPPC2P0DI81 140 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 TRAPPC2BP0DI82 140 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 RALAP11233 206 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 HOXB1P14653 301 aaPredicted RBP4.93□□□□□ -1.62
PRKD3-210ENST00000494667 POLR2CP19387 275 aaPredicted RBP4.93□□□□□ -1.62
PRKD3-210ENST00000494667 EIF2AK2P19525 551 aaKnown RBP4.93□□□□□ -1.62
PRKD3-210ENST00000494667 SLC7A1P30825 629 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 CA8P35219 290 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 IDUAP35475 653 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 ALDH18A1P54886 795 aaKnown RBP4.93□□□□□ -1.62
PRKD3-210ENST00000494667 NME5P56597 212 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 CD300CQ08708 224 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 ALCAMQ13740 583 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 ATAD3BQ5T9A4 648 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 ENOSF1Q7L5Y1 443 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 SEPT12Q8IYM1 358 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 ANKRD13AQ8IZ07 590 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 CNTD1Q8N815 330 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 CPT1BQ92523 772 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 WNK4Q96J92 1243 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 REEP2Q9BRK0 252 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 AIFM2Q9BRQ8 373 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 PAK1IP1Q9NWT1 392 aaPredicted RBP4.93□□□□□ -1.62
PRKD3-210ENST00000494667 GDAP2Q9NXN4 497 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 CDC14AQ9UNH5 594 aa4.93□□□□□ -1.62
PRKD3-210ENST00000494667 WBP11Q9Y2W2 641 aaKnown RBP4.93□□□□□ -1.62
PRKD3-210ENST00000494667 MEI4A8MW99 385 aa4.92□□□□□ -1.62
PRKD3-210ENST00000494667 VWA5AO00534 786 aa4.92□□□□□ -1.62
PRKD3-210ENST00000494667 MYCP01106 439 aaPredicted RBP4.92□□□□□ -1.62
PRKD3-210ENST00000494667 ENO2P09104 434 aaPredicted RBP4.92□□□□□ -1.62
PRKD3-210ENST00000494667 FGF3P11487 239 aaPredicted RBP4.92□□□□□ -1.62
PRKD3-210ENST00000494667 MYCLP1P12525 358 aaPredicted RBP4.92□□□□□ -1.62
PRKD3-210ENST00000494667 RPL17P18621 184 aaKnown RBP4.92□□□□□ -1.62
PRKD3-210ENST00000494667 MZF1P28698 734 aaPredicted RBP4.92□□□□□ -1.62
PRKD3-210ENST00000494667 CD40LGP29965 261 aa4.92□□□□□ -1.62
PRKD3-210ENST00000494667 SERPINB9P50453 376 aa4.92□□□□□ -1.62
PRKD3-210ENST00000494667 ADCY7P51828 1080 aa4.92□□□□□ -1.62
PRKD3-210ENST00000494667 STX1BP61266 288 aa4.92□□□□□ -1.62
PRKD3-210ENST00000494667 RHDQ02161 417 aa4.92□□□□□ -1.62
PRKD3-210ENST00000494667 DMPKQ09013 629 aa4.92□□□□□ -1.62
PRKD3-210ENST00000494667 NAB1Q13506 487 aa4.92□□□□□ -1.62
PRKD3-210ENST00000494667 NPTX1Q15818 432 aa4.92□□□□□ -1.62
PRKD3-210ENST00000494667 AASDHQ4L235 1098 aaPredicted RBP4.92□□□□□ -1.62
PRKD3-210ENST00000494667 DCAF17Q5H9S7 520 aaPredicted RBP4.92□□□□□ -1.62
PRKD3-210ENST00000494667 FGD3Q5JSP0 725 aa4.92□□□□□ -1.62
PRKD3-210ENST00000494667 C12orf60Q5U649 245 aa4.92□□□□□ -1.62
PRKD3-210ENST00000494667 PDPK2PQ6A1A2 396 aa4.92□□□□□ -1.62
PRKD3-210ENST00000494667 KRT80Q6KB66 452 aa4.92□□□□□ -1.62
PRKD3-210ENST00000494667 C8orf82Q6P1X6 216 aaPredicted RBP4.92□□□□□ -1.62
PRKD3-210ENST00000494667 HACD2Q6Y1H2 254 aa4.92□□□□□ -1.62
PRKD3-210ENST00000494667 BNC2Q6ZN30 1099 aaPredicted RBP4.92□□□□□ -1.62
PRKD3-210ENST00000494667 SPRED1Q7Z699 444 aa4.92□□□□□ -1.62
PRKD3-210ENST00000494667 LIX1LQ8IVB5 337 aa4.92□□□□□ -1.62
PRKD3-210ENST00000494667 CLYBLQ8N0X4 340 aa4.92□□□□□ -1.62
PRKD3-210ENST00000494667 SPARTQ8N0X7 666 aa4.92□□□□□ -1.62
PRKD3-210ENST00000494667 SIX6OS1Q8N1H7 587 aa4.92□□□□□ -1.62
PRKD3-210ENST00000494667 NIPA2Q8N8Q9 360 aa4.92□□□□□ -1.62
PRKD3-210ENST00000494667 CMASQ8NFW8 434 aaPredicted RBP4.92□□□□□ -1.62
PRKD3-210ENST00000494667 HELQQ8TDG4 1101 aa4.92□□□□□ -1.62
PRKD3-210ENST00000494667 PEX13Q92968 403 aa4.92□□□□□ -1.62
PRKD3-210ENST00000494667 FKBP10Q96AY3 582 aa4.92□□□□□ -1.62
PRKD3-210ENST00000494667 LRRC39Q96DD0 335 aa4.92□□□□□ -1.62
PRKD3-210ENST00000494667 FAR2Q96K12 515 aa4.92□□□□□ -1.62
PRKD3-210ENST00000494667 WRNIP1Q96S55 665 aa4.92□□□□□ -1.62
PRKD3-210ENST00000494667 TRIM56Q9BRZ2 755 aaKnown RBP4.92□□□□□ -1.62
PRKD3-210ENST00000494667 C20orf27Q9GZN8 174 aa4.92□□□□□ -1.62
PRKD3-210ENST00000494667 SLA2Q9H6Q3 261 aa4.92□□□□□ -1.62
PRKD3-210ENST00000494667 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms