RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, humanhuman

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-208ENST00000493903 SCFD2Q8WU76 684 aa4.83□□□□□ -1.64
GTF3A-208ENST00000493903 NPIPB3Q92617 1050 aa4.83□□□□□ -1.64
GTF3A-208ENST00000493903 ARRDC3Q96B67 414 aa4.83□□□□□ -1.64
GTF3A-208ENST00000493903 ELP4Q96EB1 424 aa4.83□□□□□ -1.64
GTF3A-208ENST00000493903 CNDP2Q96KP4 475 aaKnown RBP4.83□□□□□ -1.64
GTF3A-208ENST00000493903 C5orf34Q96MH7 638 aa4.83□□□□□ -1.64
GTF3A-208ENST00000493903 DPYSL5Q9BPU6 564 aa4.83□□□□□ -1.64
GTF3A-208ENST00000493903 HERC2P3Q9BVR0 1158 aa4.83□□□□□ -1.64
GTF3A-208ENST00000493903 MXD3Q9BW11 206 aa4.83□□□□□ -1.64
GTF3A-208ENST00000493903 SERTAD3Q9UJW9 196 aa4.83□□□□□ -1.64
GTF3A-208ENST00000493903 TRPC5Q9UL62 973 aaPredicted RBP4.83□□□□□ -1.64
GTF3A-208ENST00000493903 PCDHGB4Q9UN71 923 aa4.83□□□□□ -1.64
GTF3A-208ENST00000493903 SORCS3Q9UPU3 1222 aa4.83□□□□□ -1.64
GTF3A-208ENST00000493903 RCE1Q9Y256 329 aa4.83□□□□□ -1.64
GTF3A-208ENST00000493903 NCAPD3P42695 1498 aa4.82□□□□□ -1.64
GTF3A-208ENST00000493903 MYADML2A6NDP7 307 aa4.82□□□□□ -1.64
GTF3A-208ENST00000493903 AGAP5A6NIR3 686 aa4.82□□□□□ -1.64
GTF3A-208ENST00000493903 TSPY2A6NKD2 308 aa4.82□□□□□ -1.64
GTF3A-208ENST00000493903 TEX22C9J3V5 150 aa4.82□□□□□ -1.64
GTF3A-208ENST00000493903 M0QYT0 321 aa4.82□□□□□ -1.64
GTF3A-208ENST00000493903 SEC14L2O76054 403 aa4.82□□□□□ -1.64
GTF3A-208ENST00000493903 BEST1O76090 585 aa4.82□□□□□ -1.64
GTF3A-208ENST00000493903 METTL18O95568 372 aa4.82□□□□□ -1.64
GTF3A-208ENST00000493903 GPANK1O95872 356 aa4.82□□□□□ -1.64
GTF3A-208ENST00000493903 TSPY3P0CV98 308 aa4.82□□□□□ -1.64
GTF3A-208ENST00000493903 TSPY8P0CW00 308 aa4.82□□□□□ -1.64
GTF3A-208ENST00000493903 FGFR4P22455 802 aa4.82□□□□□ -1.64
GTF3A-208ENST00000493903 ACSL1P33121 698 aa4.82□□□□□ -1.64
GTF3A-208ENST00000493903 ABCD1P33897 745 aa4.82□□□□□ -1.64
GTF3A-208ENST00000493903 GRK5P34947 590 aa4.82□□□□□ -1.64
GTF3A-208ENST00000493903 HADHAP40939 763 aa4.82□□□□□ -1.64
GTF3A-208ENST00000493903 EIF3BP55884 814 aaKnown RBP4.82□□□□□ -1.64
GTF3A-208ENST00000493903 SNX16P57768 344 aa4.82□□□□□ -1.64
GTF3A-208ENST00000493903 TSPY1Q01534 308 aa4.82□□□□□ -1.64
GTF3A-208ENST00000493903 NHLH2Q02577 135 aa4.82□□□□□ -1.64
GTF3A-208ENST00000493903 AIMP2Q13155 320 aaKnown RBP4.82□□□□□ -1.64
GTF3A-208ENST00000493903 GRM7Q14831 915 aa4.82□□□□□ -1.64
GTF3A-208ENST00000493903 KRTAP19-4Q3LI73 84 aa4.82□□□□□ -1.64
GTF3A-208ENST00000493903 PREPLQ4J6C6 727 aaPredicted RBP4.82□□□□□ -1.64
GTF3A-208ENST00000493903 LRRC24Q50LG9 513 aa4.82□□□□□ -1.64
GTF3A-208ENST00000493903 DEPDC1Q5TB30 811 aa4.82□□□□□ -1.64
GTF3A-208ENST00000493903 MTHFD1LQ6UB35 978 aa4.82□□□□□ -1.64
GTF3A-208ENST00000493903 PLEKHH3Q7Z736 793 aa4.82□□□□□ -1.64
GTF3A-208ENST00000493903 ELOA2Q8IYF1 753 aaPredicted RBP4.82□□□□□ -1.64
GTF3A-208ENST00000493903 ZNF808Q8N4W9 903 aaPredicted RBP4.82□□□□□ -1.64
GTF3A-208ENST00000493903 METTL25Q8N6Q8 603 aa4.82□□□□□ -1.64
GTF3A-208ENST00000493903 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.82□□□□□ -1.64
GTF3A-208ENST00000493903 ATG4AQ8WYN0 398 aa4.82□□□□□ -1.64
GTF3A-208ENST00000493903 SNX19Q92543 992 aa4.82□□□□□ -1.64
GTF3A-208ENST00000493903 ATP6V1E2Q96A05 226 aa4.82□□□□□ -1.64
GTF3A-208ENST00000493903 FAM136AQ96C01 138 aa4.82□□□□□ -1.64
GTF3A-208ENST00000493903 VMP1Q96GC9 406 aa4.82□□□□□ -1.64
GTF3A-208ENST00000493903 SPATA17Q96L03 361 aa4.82□□□□□ -1.64
GTF3A-208ENST00000493903 NEU1Q99519 415 aa4.82□□□□□ -1.64
GTF3A-208ENST00000493903 ADPGKQ9BRR6 497 aa4.82□□□□□ -1.64
GTF3A-208ENST00000493903 PDE11AQ9HCR9 933 aa4.82□□□□□ -1.64
GTF3A-208ENST00000493903 MPP6Q9NZW5 540 aa4.82□□□□□ -1.64
GTF3A-208ENST00000493903 KCNE5Q9UJ90 142 aa4.82□□□□□ -1.64
GTF3A-208ENST00000493903 RAB21Q9UL25 225 aa4.82□□□□□ -1.64
GTF3A-208ENST00000493903 SLC12A4Q9UP95 1085 aa4.82□□□□□ -1.64
GTF3A-208ENST00000493903 THOC2Q8NI27 1593 aaKnown RBP4.82□□□□□ -1.64
GTF3A-208ENST00000493903 LIPT2A6NK58 231 aa4.81□□□□□ -1.64
GTF3A-208ENST00000493903 C3orf70A6NLC5 250 aaPredicted RBP4.81□□□□□ -1.64
GTF3A-208ENST00000493903 C16orf96A6NNT2 1141 aa4.81□□□□□ -1.64
GTF3A-208ENST00000493903 PSMD9O00233 223 aa4.81□□□□□ -1.64
GTF3A-208ENST00000493903 FFAR3O14843 346 aa4.81□□□□□ -1.64
GTF3A-208ENST00000493903 ERN1O75460 977 aaKnown RBP4.81□□□□□ -1.64
GTF3A-208ENST00000493903 CSPG5O95196 566 aa4.81□□□□□ -1.64
GTF3A-208ENST00000493903 CFIP05156 583 aa4.81□□□□□ -1.64
GTF3A-208ENST00000493903 SPARCP09486 303 aa4.81□□□□□ -1.64
GTF3A-208ENST00000493903 COX7A2P14406 83 aa4.81□□□□□ -1.64
GTF3A-208ENST00000493903 YY1P25490 414 aa4.81□□□□□ -1.64
GTF3A-208ENST00000493903 NFKBIAP25963 317 aa4.81□□□□□ -1.64
GTF3A-208ENST00000493903 FOXL2P58012 376 aa4.81□□□□□ -1.64
GTF3A-208ENST00000493903 HSD11B2P80365 405 aa4.81□□□□□ -1.64
GTF3A-208ENST00000493903 FPGSQ05932 587 aa4.81□□□□□ -1.64
GTF3A-208ENST00000493903 BFSP2Q13515 415 aa4.81□□□□□ -1.64
GTF3A-208ENST00000493903 SLC9A4Q6AI14 798 aa4.81□□□□□ -1.64
GTF3A-208ENST00000493903 ACSM6Q6P461 480 aa4.81□□□□□ -1.64
GTF3A-208ENST00000493903 TMEM151BQ8IW70 566 aa4.81□□□□□ -1.64
GTF3A-208ENST00000493903 ADGRG5Q8IZF4 528 aa4.81□□□□□ -1.64
GTF3A-208ENST00000493903 SUPT20HQ8NEM7 779 aa4.81□□□□□ -1.64
GTF3A-208ENST00000493903 MIEF2Q96C03 454 aa4.81□□□□□ -1.64
GTF3A-208ENST00000493903 KIF1BPQ96EK5 621 aa4.81□□□□□ -1.64
GTF3A-208ENST00000493903 VPS50Q96JG6 964 aa4.81□□□□□ -1.64
GTF3A-208ENST00000493903 LMF1Q96S06 567 aa4.81□□□□□ -1.64
GTF3A-208ENST00000493903 DCLRE1CQ96SD1 692 aaKnown RBP4.81□□□□□ -1.64
GTF3A-208ENST00000493903 PLA2G12BQ9BX93 195 aa4.81□□□□□ -1.64
GTF3A-208ENST00000493903 KRTAP9-9Q9BYP9 154 aa4.81□□□□□ -1.64
GTF3A-208ENST00000493903 KRTAP9-4Q9BYQ2 154 aa4.81□□□□□ -1.64
GTF3A-208ENST00000493903 OR10A4Q9H209 315 aa4.81□□□□□ -1.64
GTF3A-208ENST00000493903 MROH8Q9H579 483 aa4.81□□□□□ -1.64
GTF3A-208ENST00000493903 ZWILCHQ9H900 591 aa4.81□□□□□ -1.64
GTF3A-208ENST00000493903 EHD2Q9NZN4 543 aa4.81□□□□□ -1.64
GTF3A-208ENST00000493903 LIMA1Q9UHB6 759 aaKnown RBP4.81□□□□□ -1.64
GTF3A-208ENST00000493903 CHORDC1Q9UHD1 332 aaPredicted RBP4.81□□□□□ -1.64
GTF3A-208ENST00000493903 ZNF112Q9UJU3 913 aa4.81□□□□□ -1.64
GTF3A-208ENST00000493903 AATKQ6ZMQ8 1374 aa4.8□□□□□ -1.64
GTF3A-208ENST00000493903 ADAMTS20P59510 1910 aa4.8□□□□□ -1.64
GTF3A-208ENST00000493903 CYP3A7-CYP3A51PA0A087WV96 503 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms