RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 KIRREL2Q6UWL6 708 aa3.33□□□□□ -1.88
HMGB1P30-201ENST00000492455 BCDIN3DQ7Z5W3 292 aaKnown RBP3.33□□□□□ -1.88
HMGB1P30-201ENST00000492455 HERC6Q8IVU3 1022 aa3.33□□□□□ -1.88
HMGB1P30-201ENST00000492455 SFTPA1Q8IWL2 248 aa3.33□□□□□ -1.88
HMGB1P30-201ENST00000492455 NRSN1Q8IZ57 195 aa3.33□□□□□ -1.88
HMGB1P30-201ENST00000492455 ABHD11Q8NFV4 315 aa3.33□□□□□ -1.88
HMGB1P30-201ENST00000492455 TBC1D5Q92609 795 aa3.33□□□□□ -1.88
HMGB1P30-201ENST00000492455 SNX18Q96RF0 628 aa3.33□□□□□ -1.88
HMGB1P30-201ENST00000492455 MMS19Q96T76 1030 aa3.33□□□□□ -1.88
HMGB1P30-201ENST00000492455 ARHGAP39Q9C0H5 1083 aa3.33□□□□□ -1.88
HMGB1P30-201ENST00000492455 TWSG1Q9GZX9 223 aa3.33□□□□□ -1.88
HMGB1P30-201ENST00000492455 EBF3Q9H4W6 596 aa3.33□□□□□ -1.88
HMGB1P30-201ENST00000492455 ELOVL5Q9NYP7 299 aa3.33□□□□□ -1.88
HMGB1P30-201ENST00000492455 MGAT4CQ9UBM8 478 aa3.33□□□□□ -1.88
HMGB1P30-201ENST00000492455 FEM1BQ9UK73 627 aa3.33□□□□□ -1.88
HMGB1P30-201ENST00000492455 ZBTB1Q9Y2K1 713 aa3.33□□□□□ -1.88
HMGB1P30-201ENST00000492455 PCDHB2Q9Y5E7 798 aa3.33□□□□□ -1.88
HMGB1P30-201ENST00000492455 ERVV-2B6SEH9 535 aa3.32□□□□□ -1.88
HMGB1P30-201ENST00000492455 TMPRSS11DO60235 418 aa3.32□□□□□ -1.88
HMGB1P30-201ENST00000492455 KAT7O95251 611 aa3.32□□□□□ -1.88
HMGB1P30-201ENST00000492455 FAM163BP0C2L3 166 aa3.32□□□□□ -1.88
HMGB1P30-201ENST00000492455 NHLRC4P0CG21 123 aaPredicted RBP3.32□□□□□ -1.88
HMGB1P30-201ENST00000492455 TMIGD3P0DMS9 266 aaPredicted RBP3.32□□□□□ -1.88
HMGB1P30-201ENST00000492455 PEPDP12955 493 aa3.32□□□□□ -1.88
HMGB1P30-201ENST00000492455 GALNSP34059 522 aa3.32□□□□□ -1.88
HMGB1P30-201ENST00000492455 ADD2P35612 726 aa3.32□□□□□ -1.88
HMGB1P30-201ENST00000492455 CDK7P50613 346 aa3.32□□□□□ -1.88
HMGB1P30-201ENST00000492455 DGKQP52824 942 aa3.32□□□□□ -1.88
HMGB1P30-201ENST00000492455 ARL4CP56559 192 aa3.32□□□□□ -1.88
HMGB1P30-201ENST00000492455 SUMO2P61956 95 aaKnown RBP3.32□□□□□ -1.88
HMGB1P30-201ENST00000492455 PPFIA1Q13136 1202 aa3.32□□□□□ -1.88
HMGB1P30-201ENST00000492455 SEMA3BQ13214 749 aa3.32□□□□□ -1.88
HMGB1P30-201ENST00000492455 GAB1Q13480 694 aa3.32□□□□□ -1.88
HMGB1P30-201ENST00000492455 CUL4BQ13620 913 aa3.32□□□□□ -1.88
HMGB1P30-201ENST00000492455 CSHL1Q14406 222 aa3.32□□□□□ -1.88
HMGB1P30-201ENST00000492455 AAK1Q2M2I8 961 aa3.32□□□□□ -1.88
HMGB1P30-201ENST00000492455 TMEM119Q4V9L6 283 aa3.32□□□□□ -1.88
HMGB1P30-201ENST00000492455 PCID2Q5JVF3 399 aa3.32□□□□□ -1.88
HMGB1P30-201ENST00000492455 KRTAP5-1Q6L8H4 278 aa3.32□□□□□ -1.88
HMGB1P30-201ENST00000492455 ACSM6Q6P461 480 aa3.32□□□□□ -1.88
HMGB1P30-201ENST00000492455 NFRKBQ6P4R8 1299 aa3.32□□□□□ -1.88
HMGB1P30-201ENST00000492455 NAPRTQ6XQN6 538 aa3.32□□□□□ -1.88
HMGB1P30-201ENST00000492455 RRAGAQ7L523 313 aa3.32□□□□□ -1.88
HMGB1P30-201ENST00000492455 YTHDF3Q7Z739 585 aaKnown RBP3.32□□□□□ -1.88
HMGB1P30-201ENST00000492455 ZBTB8BQ8NAP8 495 aaPredicted RBP3.32□□□□□ -1.88
HMGB1P30-201ENST00000492455 SPPL3Q8TCT6 385 aa3.32□□□□□ -1.88
HMGB1P30-201ENST00000492455 CSGALNACT1Q8TDX6 532 aa3.32□□□□□ -1.88
HMGB1P30-201ENST00000492455 OVCA2Q8WZ82 227 aa3.32□□□□□ -1.88
HMGB1P30-201ENST00000492455 TRMT61AQ96FX7 289 aaKnown RBP3.32□□□□□ -1.88
HMGB1P30-201ENST00000492455 G6PC2Q9NQR9 355 aa3.32□□□□□ -1.88
HMGB1P30-201ENST00000492455 GAR1Q9NY12 217 aaKnown RBP3.32□□□□□ -1.88
HMGB1P30-201ENST00000492455 CCNL1Q9UK58 526 aaPredicted RBP3.32□□□□□ -1.88
HMGB1P30-201ENST00000492455 FZD4Q9ULV1 537 aa3.32□□□□□ -1.88
HMGB1P30-201ENST00000492455 RCE1Q9Y256 329 aa3.32□□□□□ -1.88
HMGB1P30-201ENST00000492455 CCDC189A1A4V9 331 aa3.31□□□□□ -1.88
HMGB1P30-201ENST00000492455 HMX3A6NHT5 357 aa3.31□□□□□ -1.88
HMGB1P30-201ENST00000492455 C16orf96A6NNT2 1141 aa3.31□□□□□ -1.88
HMGB1P30-201ENST00000492455 QSOX1O00391 747 aa3.31□□□□□ -1.88
HMGB1P30-201ENST00000492455 NKX2-8O15522 239 aa3.31□□□□□ -1.88
HMGB1P30-201ENST00000492455 HEXIM1O94992 359 aaKnown RBP3.31□□□□□ -1.88
HMGB1P30-201ENST00000492455 HNRNPCP07910 306 aaKnown RBP eCLIP3.31□□□□□ -1.88
HMGB1P30-201ENST00000492455 CKMT1AP12532 417 aa3.31□□□□□ -1.88
HMGB1P30-201ENST00000492455 IGHMBP2P38935 993 aaKnown RBP3.31□□□□□ -1.88
HMGB1P30-201ENST00000492455 GSTM5P46439 218 aa3.31□□□□□ -1.88
HMGB1P30-201ENST00000492455 POLE2P56282 527 aa3.31□□□□□ -1.88
HMGB1P30-201ENST00000492455 FOXL2P58012 376 aa3.31□□□□□ -1.88
HMGB1P30-201ENST00000492455 RPL15P61313 204 aaKnown RBP3.31□□□□□ -1.88
HMGB1P30-201ENST00000492455 CFHR3Q02985 330 aa3.31□□□□□ -1.88
HMGB1P30-201ENST00000492455 SF3A3Q12874 501 aaKnown RBP eCLIP3.31□□□□□ -1.88
HMGB1P30-201ENST00000492455 BFSP2Q13515 415 aa3.31□□□□□ -1.88
HMGB1P30-201ENST00000492455 TBC1D25Q3MII6 688 aa3.31□□□□□ -1.88
HMGB1P30-201ENST00000492455 AWAT1Q58HT5 328 aa3.31□□□□□ -1.88
HMGB1P30-201ENST00000492455 PXDC1Q5TGL8 231 aa3.31□□□□□ -1.88
HMGB1P30-201ENST00000492455 CYP26C1Q6V0L0 522 aa3.31□□□□□ -1.88
HMGB1P30-201ENST00000492455 ZNF782Q6ZMW2 699 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P30-201ENST00000492455 RFX8Q6ZV50 586 aa3.31□□□□□ -1.88
HMGB1P30-201ENST00000492455 C12orf76Q8N812 135 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P30-201ENST00000492455 TERB1Q8NA31 727 aa3.31□□□□□ -1.88
HMGB1P30-201ENST00000492455 MAFAQ8NHW3 353 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P30-201ENST00000492455 GLMPQ8WWB7 406 aa3.31□□□□□ -1.88
HMGB1P30-201ENST00000492455 THAP4Q8WY91 577 aa3.31□□□□□ -1.88
HMGB1P30-201ENST00000492455 GCC1Q96CN9 775 aa3.31□□□□□ -1.88
HMGB1P30-201ENST00000492455 LTV1Q96GA3 475 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P30-201ENST00000492455 VPS50Q96JG6 964 aa3.31□□□□□ -1.88
HMGB1P30-201ENST00000492455 GATA5Q9BWX5 397 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P30-201ENST00000492455 CIPCQ9C0C6 399 aa3.31□□□□□ -1.88
HMGB1P30-201ENST00000492455 CDCP1Q9H5V8 836 aa3.31□□□□□ -1.88
HMGB1P30-201ENST00000492455 SNX15Q9NRS6 342 aa3.31□□□□□ -1.88
HMGB1P30-201ENST00000492455 ABHD10Q9NUJ1 306 aa3.31□□□□□ -1.88
HMGB1P30-201ENST00000492455 MTMR4Q9NYA4 1195 aa3.31□□□□□ -1.88
HMGB1P30-201ENST00000492455 C19orf53Q9UNZ5 99 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P30-201ENST00000492455 UBE2J1Q9Y385 318 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P30-201ENST00000492455 TISP43B9A030 160 aa3.3□□□□□ -1.88
HMGB1P30-201ENST00000492455 PRYO14603 147 aa3.3□□□□□ -1.88
HMGB1P30-201ENST00000492455 MT-CO3P00414 261 aa3.3□□□□□ -1.88
HMGB1P30-201ENST00000492455 SFPQP23246 707 aaKnown RBP eCLIP3.3□□□□□ -1.88
HMGB1P30-201ENST00000492455 THBS4P35443 961 aa3.3□□□□□ -1.88
HMGB1P30-201ENST00000492455 COPB1P53618 953 aaKnown RBP3.3□□□□□ -1.88
HMGB1P30-201ENST00000492455 TXNL4AP83876 142 aaKnown RBP3.3□□□□□ -1.88
HMGB1P30-201ENST00000492455 TFF2Q03403 129 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms