RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 GOLGA6L7A0A1B0GV03 622 aa14.38□□□□□ -0.11
SMPD4-219ENST00000491128 KCNK1O00180 336 aa14.38□□□□□ -0.11
SMPD4-219ENST00000491128 SHBGP04278 402 aa14.38□□□□□ -0.11
SMPD4-219ENST00000491128 VAV1P15498 845 aa14.38□□□□□ -0.11
SMPD4-219ENST00000491128 TGM2P21980 687 aa14.38□□□□□ -0.11
SMPD4-219ENST00000491128 CCR1P32246 355 aa14.38□□□□□ -0.11
SMPD4-219ENST00000491128 CTNNB1P35222 781 aa14.38□□□□□ -0.11
SMPD4-219ENST00000491128 HTRA4P83105 476 aaPredicted RBP14.38□□□□□ -0.11
SMPD4-219ENST00000491128 SEMA3BQ13214 749 aa14.38□□□□□ -0.11
SMPD4-219ENST00000491128 SCML4Q8N228 414 aa14.38□□□□□ -0.11
SMPD4-219ENST00000491128 MYEOVQ96EZ4 313 aa14.38□□□□□ -0.11
SMPD4-219ENST00000491128 CENPHQ9H3R5 247 aa14.38□□□□□ -0.11
SMPD4-219ENST00000491128 TLR8Q9NR97 1041 aaKnown RBP14.38□□□□□ -0.11
SMPD4-219ENST00000491128 GKN1Q9NS71 199 aa14.38□□□□□ -0.11
SMPD4-219ENST00000491128 MARCH2Q9P0N8 246 aa14.38□□□□□ -0.11
SMPD4-219ENST00000491128 VANGL2Q9ULK5 521 aa14.38□□□□□ -0.11
SMPD4-219ENST00000491128 LTBP2Q14767 1821 aa14.38□□□□□ -0.11
SMPD4-219ENST00000491128 ZNF638Q14966 1978 aaKnown RBP14.37□□□□□ -0.11
SMPD4-219ENST00000491128 PTPRSQ13332 1948 aa14.37□□□□□ -0.11
SMPD4-219ENST00000491128 C2orf78A6NCI8 922 aa14.37□□□□□ -0.11
SMPD4-219ENST00000491128 SMIM23A6NLE4 172 aa14.37□□□□□ -0.11
SMPD4-219ENST00000491128 NRG2O14511 850 aaPredicted RBP14.37□□□□□ -0.11
SMPD4-219ENST00000491128 SYF2O95926 243 aaKnown RBP14.37□□□□□ -0.11
SMPD4-219ENST00000491128 HMGA1P17096 107 aaKnown RBP14.37□□□□□ -0.11
SMPD4-219ENST00000491128 ITIH2P19823 946 aa14.37□□□□□ -0.11
SMPD4-219ENST00000491128 HSPA9P38646 679 aaKnown RBP14.37□□□□□ -0.11
SMPD4-219ENST00000491128 TBX4P57082 545 aa14.37□□□□□ -0.11
SMPD4-219ENST00000491128 FASTKD3Q14CZ7 662 aaKnown RBP14.37□□□□□ -0.11
SMPD4-219ENST00000491128 CFAP58Q5T655 872 aa14.37□□□□□ -0.11
SMPD4-219ENST00000491128 CIR1Q86X95 450 aaPredicted RBP14.37□□□□□ -0.11
SMPD4-219ENST00000491128 NTAN1Q96AB6 310 aa14.37□□□□□ -0.11
SMPD4-219ENST00000491128 SLC9A7Q96T83 725 aa14.37□□□□□ -0.11
SMPD4-219ENST00000491128 TCF25Q9BQ70 676 aa14.37□□□□□ -0.11
SMPD4-219ENST00000491128 HERC2P3Q9BVR0 1158 aa14.37□□□□□ -0.11
SMPD4-219ENST00000491128 NACA2Q9H009 215 aa14.37□□□□□ -0.11
SMPD4-219ENST00000491128 PRDM12Q9H4Q4 367 aa14.37□□□□□ -0.11
SMPD4-219ENST00000491128 IL37Q9NZH6 218 aa14.37□□□□□ -0.11
SMPD4-219ENST00000491128 HS3ST4Q9Y661 456 aa14.37□□□□□ -0.11
SMPD4-219ENST00000491128 TRDMT1O14717 391 aaKnown RBP14.37□□□□□ -0.11
SMPD4-219ENST00000491128 DCLK1O15075 740 aa14.37□□□□□ -0.11
SMPD4-219ENST00000491128 TGM5O43548 720 aa14.37□□□□□ -0.11
SMPD4-219ENST00000491128 RTN3O95197 1032 aaPredicted RBP14.37□□□□□ -0.11
SMPD4-219ENST00000491128 ACSL3O95573 720 aa14.37□□□□□ -0.11
SMPD4-219ENST00000491128 GJA1P17302 382 aa14.37□□□□□ -0.11
SMPD4-219ENST00000491128 OAS2P29728 719 aaKnown RBP14.37□□□□□ -0.11
SMPD4-219ENST00000491128 ELF1P32519 619 aa14.37□□□□□ -0.11
SMPD4-219ENST00000491128 ALDH1A3P47895 512 aa14.37□□□□□ -0.11
SMPD4-219ENST00000491128 TUFMP49411 452 aaKnown RBP14.37□□□□□ -0.11
SMPD4-219ENST00000491128 LMNB2Q03252 620 aa14.37□□□□□ -0.11
SMPD4-219ENST00000491128 NNTQ13423 1086 aa14.37□□□□□ -0.11
SMPD4-219ENST00000491128 PIK3R6Q5UE93 754 aa14.37□□□□□ -0.11
SMPD4-219ENST00000491128 KCTD16Q68DU8 428 aa14.37□□□□□ -0.11
SMPD4-219ENST00000491128 RHBDF2Q6PJF5 856 aa14.37□□□□□ -0.11
SMPD4-219ENST00000491128 ARHGAP36Q6ZRI8 547 aa14.37□□□□□ -0.11
SMPD4-219ENST00000491128 TFAP2DQ7Z6R9 452 aa14.37□□□□□ -0.11
SMPD4-219ENST00000491128 MICAL1Q8TDZ2 1067 aa14.37□□□□□ -0.11
SMPD4-219ENST00000491128 SPATA17Q96L03 361 aa14.37□□□□□ -0.11
SMPD4-219ENST00000491128 C9orf72Q96LT7 481 aa14.37□□□□□ -0.11
SMPD4-219ENST00000491128 RAD9AQ99638 391 aa14.37□□□□□ -0.11
SMPD4-219ENST00000491128 EPB41L4BQ9H329 900 aa14.37□□□□□ -0.11
SMPD4-219ENST00000491128 PIH1D1Q9NWS0 290 aaKnown RBP14.37□□□□□ -0.11
SMPD4-219ENST00000491128 SMPD4Q9NXE4 827 aa14.37□□□□□ -0.11
SMPD4-219ENST00000491128 FAM53CQ9NYF3 392 aa14.37□□□□□ -0.11
SMPD4-219ENST00000491128 RRN3Q9NYV6 651 aa14.37□□□□□ -0.11
SMPD4-219ENST00000491128 WHRNQ9P202 907 aa14.37□□□□□ -0.11
SMPD4-219ENST00000491128 ALPK3Q96L96 1907 aa14.37□□□□□ -0.11
SMPD4-219ENST00000491128 FAM92AA1XBS5 289 aa14.36□□□□□ -0.11
SMPD4-219ENST00000491128 DNALI1O14645 258 aaPredicted RBP14.36□□□□□ -0.11
SMPD4-219ENST00000491128 AVILO75366 819 aa14.36□□□□□ -0.11
SMPD4-219ENST00000491128 PIAS1O75925 651 aa14.36□□□□□ -0.11
SMPD4-219ENST00000491128 IRF1P10914 325 aa14.36□□□□□ -0.11
SMPD4-219ENST00000491128 IRS1P35568 1242 aa14.36□□□□□ -0.11
SMPD4-219ENST00000491128 PMS2P54278 862 aa14.36□□□□□ -0.11
SMPD4-219ENST00000491128 SCAPQ12770 1279 aa14.36□□□□□ -0.11
SMPD4-219ENST00000491128 SLC29A2Q14542 456 aa14.36□□□□□ -0.11
SMPD4-219ENST00000491128 HIBCHQ6NVY1 386 aaPredicted RBP14.36□□□□□ -0.11
SMPD4-219ENST00000491128 CPT1BQ92523 772 aa14.36□□□□□ -0.11
SMPD4-219ENST00000491128 RNF38Q9H0F5 515 aa14.36□□□□□ -0.11
SMPD4-219ENST00000491128 ZBP1Q9H171 429 aa14.36□□□□□ -0.11
SMPD4-219ENST00000491128 PCDH9Q9HC56 1237 aa14.36□□□□□ -0.11
SMPD4-219ENST00000491128 ARHGEF38Q9NXL2 777 aa14.36□□□□□ -0.11
SMPD4-219ENST00000491128 MTRF1LQ9UGC7 380 aaKnown RBP14.36□□□□□ -0.11
SMPD4-219ENST00000491128 TPX2Q9ULW0 747 aaKnown RBP14.36□□□□□ -0.11
SMPD4-219ENST00000491128 KYNUQ16719 465 aa14.36□□□□□ -0.11
SMPD4-219ENST00000491128 PSRC1Q6PGN9 363 aaPredicted RBP14.36□□□□□ -0.11
SMPD4-219ENST00000491128 SYDE1Q6ZW31 735 aaPredicted RBP14.36□□□□□ -0.11
SMPD4-219ENST00000491128 DNAJB7Q7Z6W7 309 aaPredicted RBP14.36□□□□□ -0.11
SMPD4-219ENST00000491128 ARL8AQ96BM9 186 aa14.36□□□□□ -0.11
SMPD4-219ENST00000491128 SERPINB11Q96P15 392 aa14.36□□□□□ -0.11
SMPD4-219ENST00000491128 ENTPD7Q9NQZ7 604 aa14.36□□□□□ -0.11
SMPD4-219ENST00000491128 RAB6BQ9NRW1 208 aa14.36□□□□□ -0.11
SMPD4-219ENST00000491128 OGFRQ9NZT2 677 aa14.36□□□□□ -0.11
SMPD4-219ENST00000491128 ATP8B1O43520 1251 aa14.35□□□□□ -0.11
SMPD4-219ENST00000491128 CNTN5O94779 1100 aa14.35□□□□□ -0.11
SMPD4-219ENST00000491128 TMEM63AO94886 807 aa14.35□□□□□ -0.11
SMPD4-219ENST00000491128 METTL18O95568 372 aa14.35□□□□□ -0.11
SMPD4-219ENST00000491128 TUBP50607 506 aa14.35□□□□□ -0.11
SMPD4-219ENST00000491128 RAB33AQ14088 237 aa14.35□□□□□ -0.11
SMPD4-219ENST00000491128 RNASEH2BQ5TBB1 312 aaKnown RBP14.35□□□□□ -0.11
SMPD4-219ENST00000491128 RAP1GAP2Q684P5 730 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms