RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 VPS16Q9H269 839 aa10.81□□□□□ -0.68
TTC28-207ENST00000490475 CAPN10Q9HC96 672 aa10.81□□□□□ -0.68
TTC28-207ENST00000490475 CD248Q9HCU0 757 aa10.81□□□□□ -0.68
TTC28-207ENST00000490475 ZDHHC4Q9NPG8 344 aa10.81□□□□□ -0.68
TTC28-207ENST00000490475 TMEM74BQ9NUR3 256 aa10.81□□□□□ -0.68
TTC28-207ENST00000490475 DNAAF2Q9NVR5 837 aaKnown RBP10.81□□□□□ -0.68
TTC28-207ENST00000490475 ELOVL2Q9NXB9 296 aa10.81□□□□□ -0.68
TTC28-207ENST00000490475 CACNA2D2Q9NY47 1150 aa10.81□□□□□ -0.68
TTC28-207ENST00000490475 TAB2Q9NYJ8 693 aa10.81□□□□□ -0.68
TTC28-207ENST00000490475 PLK2Q9NYY3 685 aa10.81□□□□□ -0.68
TTC28-207ENST00000490475 TSPAN16Q9UKR8 245 aa10.81□□□□□ -0.68
TTC28-207ENST00000490475 CYP8B1Q9UNU6 501 aa10.81□□□□□ -0.68
TTC28-207ENST00000490475 PLA2G4CQ9UP65 541 aa10.81□□□□□ -0.68
TTC28-207ENST00000490475 USP24Q9UPU5 2620 aa10.81□□□□□ -0.68
TTC28-207ENST00000490475 ANTXRLA6NF34 631 aa10.8□□□□□ -0.68
TTC28-207ENST00000490475 TRIM24O15164 1050 aa10.8□□□□□ -0.68
TTC28-207ENST00000490475 FBXO21O94952 628 aa10.8□□□□□ -0.68
TTC28-207ENST00000490475 LETM1O95202 739 aaPredicted RBP10.8□□□□□ -0.68
TTC28-207ENST00000490475 ATP5BP06576 529 aaKnown RBP10.8□□□□□ -0.68
TTC28-207ENST00000490475 HMBSP08397 361 aa10.8□□□□□ -0.68
TTC28-207ENST00000490475 MAPK8P45983 427 aa10.8□□□□□ -0.68
TTC28-207ENST00000490475 SLC11A2P49281 568 aa10.8□□□□□ -0.68
TTC28-207ENST00000490475 MYL5Q02045 173 aa10.8□□□□□ -0.68
TTC28-207ENST00000490475 GCNT1Q02742 428 aa10.8□□□□□ -0.68
TTC28-207ENST00000490475 ZBTB16Q05516 673 aa10.8□□□□□ -0.68
TTC28-207ENST00000490475 KCNMA1Q12791 1236 aa10.8□□□□□ -0.68
TTC28-207ENST00000490475 SFSWAPQ12872 951 aaKnown RBP10.8□□□□□ -0.68
TTC28-207ENST00000490475 KRT31Q15323 416 aa10.8□□□□□ -0.68
TTC28-207ENST00000490475 ZNF423Q2M1K9 1284 aa10.8□□□□□ -0.68
TTC28-207ENST00000490475 GOLGA7BQ2TAP0 167 aa10.8□□□□□ -0.68
TTC28-207ENST00000490475 PLEKHG6Q3KR16 790 aa10.8□□□□□ -0.68
TTC28-207ENST00000490475 FUT11Q495W5 492 aa10.8□□□□□ -0.68
TTC28-207ENST00000490475 ADGRF1Q5T601 910 aa10.8□□□□□ -0.68
TTC28-207ENST00000490475 SMYD5Q6GMV2 418 aa10.8□□□□□ -0.68
TTC28-207ENST00000490475 KIAA1211LQ6NV74 962 aa10.8□□□□□ -0.68
TTC28-207ENST00000490475 DPY19L2P1Q6NXN4 242 aa10.8□□□□□ -0.68
TTC28-207ENST00000490475 TRIM65Q6PJ69 517 aa10.8□□□□□ -0.68
TTC28-207ENST00000490475 IL27RAQ6UWB1 636 aa10.8□□□□□ -0.68
TTC28-207ENST00000490475 LCLAT1Q6UWP7 414 aa10.8□□□□□ -0.68
TTC28-207ENST00000490475 SERPINA13PQ6UXR4 307 aa10.8□□□□□ -0.68
TTC28-207ENST00000490475 CCDC117Q8IWD4 279 aaPredicted RBP10.8□□□□□ -0.68
TTC28-207ENST00000490475 AOPEPQ8N6M6 819 aa10.8□□□□□ -0.68
TTC28-207ENST00000490475 TFAP2BQ92481 460 aa10.8□□□□□ -0.68
TTC28-207ENST00000490475 TMA16Q96EY4 203 aaKnown RBP10.8□□□□□ -0.68
TTC28-207ENST00000490475 SIPA1Q96FS4 1042 aa10.8□□□□□ -0.68
TTC28-207ENST00000490475 PIWIL1Q96J94 861 aaKnown RBP10.8□□□□□ -0.68
TTC28-207ENST00000490475 HSFY1Q96LI6 401 aa10.8□□□□□ -0.68
TTC28-207ENST00000490475 ACOX2Q99424 681 aa10.8□□□□□ -0.68
TTC28-207ENST00000490475 FUCA2Q9BTY2 467 aa10.8□□□□□ -0.68
TTC28-207ENST00000490475 NUP58Q9BVL2 599 aa10.8□□□□□ -0.68
TTC28-207ENST00000490475 GTPBP2Q9BX10 602 aaKnown RBP10.8□□□□□ -0.68
TTC28-207ENST00000490475 ULBP1Q9BZM6 244 aa10.8□□□□□ -0.68
TTC28-207ENST00000490475 HSD3B7Q9H2F3 369 aa10.8□□□□□ -0.68
TTC28-207ENST00000490475 SIX2Q9NPC8 291 aa10.8□□□□□ -0.68
TTC28-207ENST00000490475 ITM2CQ9NQX7 267 aa10.8□□□□□ -0.68
TTC28-207ENST00000490475 USP36Q9P275 1121 aaKnown RBP10.8□□□□□ -0.68
TTC28-207ENST00000490475 STOML2Q9UJZ1 356 aa10.8□□□□□ -0.68
TTC28-207ENST00000490475 HCN2Q9UL51 889 aa10.8□□□□□ -0.68
TTC28-207ENST00000490475 CKAP5Q14008 2032 aa10.8□□□□□ -0.68
TTC28-207ENST00000490475 A0A1B0GTW7 788 aa10.79□□□□□ -0.68
TTC28-207ENST00000490475 GTPBP10A4D1E9 387 aaKnown RBP10.79□□□□□ -0.68
TTC28-207ENST00000490475 MEI4A8MW99 385 aa10.79□□□□□ -0.68
TTC28-207ENST00000490475 IGLV3-19P01714 112 aa10.79□□□□□ -0.68
TTC28-207ENST00000490475 CDK11BP21127 795 aaKnown RBP10.79□□□□□ -0.68
TTC28-207ENST00000490475 RING1Q06587 406 aa10.79□□□□□ -0.68
TTC28-207ENST00000490475 ADIGQ0VDE8 80 aa10.79□□□□□ -0.68
TTC28-207ENST00000490475 FOXC1Q12948 553 aa10.79□□□□□ -0.68
TTC28-207ENST00000490475 ZNF234Q14588 700 aa10.79□□□□□ -0.68
TTC28-207ENST00000490475 CNGA2Q16280 664 aa10.79□□□□□ -0.68
TTC28-207ENST00000490475 ARHGAP44Q17R89 818 aa10.79□□□□□ -0.68
TTC28-207ENST00000490475 GEN1Q17RS7 908 aa10.79□□□□□ -0.68
TTC28-207ENST00000490475 BSPRYQ5W0U4 402 aa10.79□□□□□ -0.68
TTC28-207ENST00000490475 MSANTD2Q6P1R3 559 aa10.79□□□□□ -0.68
TTC28-207ENST00000490475 UNQ6494/PRO21346Q6UXR6 183 aa10.79□□□□□ -0.68
TTC28-207ENST00000490475 PIP4P1Q86T03 277 aa10.79□□□□□ -0.68
TTC28-207ENST00000490475 TMPRSS6Q8IU80 811 aa10.79□□□□□ -0.68
TTC28-207ENST00000490475 FMNL3Q8IVF7 1028 aa10.79□□□□□ -0.68
TTC28-207ENST00000490475 DHX40Q8IX18 779 aaKnown RBP10.79□□□□□ -0.68
TTC28-207ENST00000490475 AHI1Q8N157 1196 aa10.79□□□□□ -0.68
TTC28-207ENST00000490475 MINDY1Q8N5J2 469 aa10.79□□□□□ -0.68
TTC28-207ENST00000490475 FRMD1Q8N878 549 aa10.79□□□□□ -0.68
TTC28-207ENST00000490475 RBBP8NLQ8NC74 664 aaPredicted RBP10.79□□□□□ -0.68
TTC28-207ENST00000490475 DEFB124Q8NES8 71 aa10.79□□□□□ -0.68
TTC28-207ENST00000490475 UBA3Q8TBC4 463 aa10.79□□□□□ -0.68
TTC28-207ENST00000490475 DNASE2BQ8WZ79 361 aa10.79□□□□□ -0.68
TTC28-207ENST00000490475 AZIN2Q96A70 460 aa10.79□□□□□ -0.68
TTC28-207ENST00000490475 FAM81BQ96LP2 452 aa10.79□□□□□ -0.68
TTC28-207ENST00000490475 ZSWIM1Q9BR11 485 aa10.79□□□□□ -0.68
TTC28-207ENST00000490475 ADAM33Q9BZ11 813 aa10.79□□□□□ -0.68
TTC28-207ENST00000490475 CIPCQ9C0C6 399 aa10.79□□□□□ -0.68
TTC28-207ENST00000490475 NAT10Q9H0A0 1025 aaKnown RBP10.79□□□□□ -0.68
TTC28-207ENST00000490475 WSB2Q9NYS7 404 aaPredicted RBP10.79□□□□□ -0.68
TTC28-207ENST00000490475 AJAP1Q9UKB5 411 aaPredicted RBP10.79□□□□□ -0.68
TTC28-207ENST00000490475 NEUROG3Q9Y4Z2 214 aa10.79□□□□□ -0.68
TTC28-207ENST00000490475 ATXN2Q99700 1313 aaKnown RBP10.79□□□□□ -0.68
TTC28-207ENST00000490475 LRRC10BA6NIK2 292 aa10.78□□□□□ -0.68
TTC28-207ENST00000490475 TULP2O00295 520 aa10.78□□□□□ -0.68
TTC28-207ENST00000490475 O00370 1275 aa10.78□□□□□ -0.68
TTC28-207ENST00000490475 GIPC1O14908 333 aa10.78□□□□□ -0.68
TTC28-207ENST00000490475 CER1O95813 267 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms