RNA–Protein interactions for RNA: ENST00000490441.1

DUBR-204, DPPA2 upstream binding RNA, humanhuman

TSL 1 (best) BASIC

Gene DUBR, Length 1,149 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUBR-204ENST00000490441 MAN1B1Q9UKM7 699 aa11.73□□□□□ -0.53
DUBR-204ENST00000490441 CLEC4EQ9ULY5 219 aa11.73□□□□□ -0.53
DUBR-204ENST00000490441 PLA2G4CQ9UP65 541 aa11.73□□□□□ -0.53
DUBR-204ENST00000490441 ADAMTS9Q9P2N4 1935 aa11.72□□□□□ -0.53
DUBR-204ENST00000490441 TYW5A2RUC4 315 aaKnown RBP11.72□□□□□ -0.53
DUBR-204ENST00000490441 UPK3BL1B0FP48 263 aa11.72□□□□□ -0.53
DUBR-204ENST00000490441 UPK3BL2E5RIL1 263 aa11.72□□□□□ -0.53
DUBR-204ENST00000490441 PMM2O15305 246 aa11.72□□□□□ -0.53
DUBR-204ENST00000490441 FBXO21O94952 628 aa11.72□□□□□ -0.53
DUBR-204ENST00000490441 PRKCHP24723 683 aa11.72□□□□□ -0.53
DUBR-204ENST00000490441 BRD2P25440 801 aaKnown RBP11.72□□□□□ -0.53
DUBR-204ENST00000490441 HOXD9P28356 352 aaPredicted RBP11.72□□□□□ -0.53
DUBR-204ENST00000490441 SLC11A2P49281 568 aa11.72□□□□□ -0.53
DUBR-204ENST00000490441 TPMTP51580 245 aa11.72□□□□□ -0.53
DUBR-204ENST00000490441 SIM1P81133 766 aaPredicted RBP11.72□□□□□ -0.53
DUBR-204ENST00000490441 SEMA3BQ13214 749 aa11.72□□□□□ -0.53
DUBR-204ENST00000490441 HNRNPDQ14103 355 aaKnown RBP11.72□□□□□ -0.53
DUBR-204ENST00000490441 CNGA2Q16280 664 aa11.72□□□□□ -0.53
DUBR-204ENST00000490441 PKDCCQ504Y2 493 aa11.72□□□□□ -0.53
DUBR-204ENST00000490441 NUGGCQ68CJ6 796 aa11.72□□□□□ -0.53
DUBR-204ENST00000490441 UNQ6494/PRO21346Q6UXR6 183 aa11.72□□□□□ -0.53
DUBR-204ENST00000490441 CHST9Q7L1S5 443 aa11.72□□□□□ -0.53
DUBR-204ENST00000490441 UNC45BQ8IWX7 931 aa11.72□□□□□ -0.53
DUBR-204ENST00000490441 ELOA2Q8IYF1 753 aaPredicted RBP11.72□□□□□ -0.53
DUBR-204ENST00000490441 AHI1Q8N157 1196 aa11.72□□□□□ -0.53
DUBR-204ENST00000490441 ZNF557Q8N988 423 aaPredicted RBP11.72□□□□□ -0.53
DUBR-204ENST00000490441 RBBP8NLQ8NC74 664 aaPredicted RBP11.72□□□□□ -0.53
DUBR-204ENST00000490441 CADM4Q8NFZ8 388 aa11.72□□□□□ -0.53
DUBR-204ENST00000490441 NELFBQ8WX92 580 aa11.72□□□□□ -0.53
DUBR-204ENST00000490441 TFAP2BQ92481 460 aa11.72□□□□□ -0.53
DUBR-204ENST00000490441 ADAM33Q9BZ11 813 aa11.72□□□□□ -0.53
DUBR-204ENST00000490441 MIR1-1HGQ9H1L0 117 aa11.72□□□□□ -0.53
DUBR-204ENST00000490441 ITM2CQ9NQX7 267 aa11.72□□□□□ -0.53
DUBR-204ENST00000490441 ABCB8Q9NUT2 735 aa11.72□□□□□ -0.53
DUBR-204ENST00000490441 WSB2Q9NYS7 404 aaPredicted RBP11.72□□□□□ -0.53
DUBR-204ENST00000490441 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.72□□□□□ -0.53
DUBR-204ENST00000490441 STOML2Q9UJZ1 356 aa11.72□□□□□ -0.53
DUBR-204ENST00000490441 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.72□□□□□ -0.53
DUBR-204ENST00000490441 CTNND2Q9UQB3 1225 aa11.72□□□□□ -0.53
DUBR-204ENST00000490441 CKAP5Q14008 2032 aa11.71□□□□□ -0.53
DUBR-204ENST00000490441 A0A1B0GTW7 788 aa11.71□□□□□ -0.53
DUBR-204ENST00000490441 PIK3R2O00459 728 aa11.71□□□□□ -0.53
DUBR-204ENST00000490441 GNA14O95837 355 aa11.71□□□□□ -0.53
DUBR-204ENST00000490441 LTFP02788 710 aa11.71□□□□□ -0.53
DUBR-204ENST00000490441 ATP5BP06576 529 aaKnown RBP11.71□□□□□ -0.53
DUBR-204ENST00000490441 PROS1P07225 676 aa11.71□□□□□ -0.53
DUBR-204ENST00000490441 PABPC1P11940 636 aaKnown RBP11.71□□□□□ -0.53
DUBR-204ENST00000490441 HLA-EP13747 358 aa11.71□□□□□ -0.53
DUBR-204ENST00000490441 SPINK2P20155 84 aa11.71□□□□□ -0.53
DUBR-204ENST00000490441 MAOBP27338 520 aa11.71□□□□□ -0.53
DUBR-204ENST00000490441 HLA-FP30511 346 aa11.71□□□□□ -0.53
DUBR-204ENST00000490441 TBX4P57082 545 aa11.71□□□□□ -0.53
DUBR-204ENST00000490441 GCNT1Q02742 428 aa11.71□□□□□ -0.53
DUBR-204ENST00000490441 TTI2Q6NXR4 508 aa11.71□□□□□ -0.53
DUBR-204ENST00000490441 PMF1Q6P1K2 205 aa11.71□□□□□ -0.53
DUBR-204ENST00000490441 MSANTD2Q6P1R3 559 aa11.71□□□□□ -0.53
DUBR-204ENST00000490441 RRAGAQ7L523 313 aa11.71□□□□□ -0.53
DUBR-204ENST00000490441 PIP4P1Q86T03 277 aa11.71□□□□□ -0.53
DUBR-204ENST00000490441 CCDC117Q8IWD4 279 aaPredicted RBP11.71□□□□□ -0.53
DUBR-204ENST00000490441 ZCCHC9Q8N567 271 aaKnown RBP11.71□□□□□ -0.53
DUBR-204ENST00000490441 OR2T3Q8NH03 318 aa11.71□□□□□ -0.53
DUBR-204ENST00000490441 CYB5D2Q8WUJ1 264 aa11.71□□□□□ -0.53
DUBR-204ENST00000490441 SLC35F5Q8WV83 523 aa11.71□□□□□ -0.53
DUBR-204ENST00000490441 KAT5Q92993 513 aa11.71□□□□□ -0.53
DUBR-204ENST00000490441 HSFY1Q96LI6 401 aa11.71□□□□□ -0.53
DUBR-204ENST00000490441 DDX50Q9BQ39 737 aaKnown RBP11.71□□□□□ -0.53
DUBR-204ENST00000490441 NUP58Q9BVL2 599 aa11.71□□□□□ -0.53
DUBR-204ENST00000490441 ZDHHC5Q9C0B5 715 aa11.71□□□□□ -0.53
DUBR-204ENST00000490441 LHX5Q9H2C1 402 aa11.71□□□□□ -0.53
DUBR-204ENST00000490441 DNAAF2Q9NVR5 837 aaKnown RBP11.71□□□□□ -0.53
DUBR-204ENST00000490441 GGA2Q9UJY4 613 aa11.71□□□□□ -0.53
DUBR-204ENST00000490441 NFE2L3Q9Y4A8 694 aa11.71□□□□□ -0.53
DUBR-204ENST00000490441 PCDHB9Q9Y5E1 797 aa11.71□□□□□ -0.53
DUBR-204ENST00000490441 PCDH15Q96QU1 1955 aa11.7□□□□□ -0.54
DUBR-204ENST00000490441 SPAARA0A1B0GVQ0 90 aa11.7□□□□□ -0.54
DUBR-204ENST00000490441 C1QTNF9BB2RNN3 333 aa11.7□□□□□ -0.54
DUBR-204ENST00000490441 KCNJ18B7U540 433 aa11.7□□□□□ -0.54
DUBR-204ENST00000490441 IRAK2O43187 625 aa11.7□□□□□ -0.54
DUBR-204ENST00000490441 SART1O43290 800 aaKnown RBP11.7□□□□□ -0.54
DUBR-204ENST00000490441 TBL1XO60907 577 aa11.7□□□□□ -0.54
DUBR-204ENST00000490441 FGFR1OPO95684 399 aaKnown RBP11.7□□□□□ -0.54
DUBR-204ENST00000490441 AFPP02771 609 aaKnown RBP11.7□□□□□ -0.54
DUBR-204ENST00000490441 C1QTNF9P0C862 333 aa11.7□□□□□ -0.54
DUBR-204ENST00000490441 KRT5P13647 590 aa11.7□□□□□ -0.54
DUBR-204ENST00000490441 POLR2EP19388 210 aaKnown RBP11.7□□□□□ -0.54
DUBR-204ENST00000490441 COPAP53621 1224 aa11.7□□□□□ -0.54
DUBR-204ENST00000490441 RING1Q06587 406 aa11.7□□□□□ -0.54
DUBR-204ENST00000490441 GRIK2Q13002 908 aa11.7□□□□□ -0.54
DUBR-204ENST00000490441 PAK1Q13153 545 aa11.7□□□□□ -0.54
DUBR-204ENST00000490441 SLC14A1Q13336 389 aa11.7□□□□□ -0.54
DUBR-204ENST00000490441 MPP7Q5T2T1 576 aa11.7□□□□□ -0.54
DUBR-204ENST00000490441 DCAF12L1Q5VU92 463 aa11.7□□□□□ -0.54
DUBR-204ENST00000490441 TMEM215Q68D42 235 aa11.7□□□□□ -0.54
DUBR-204ENST00000490441 MBLAC2Q68D91 279 aa11.7□□□□□ -0.54
DUBR-204ENST00000490441 FOXR2Q6PJQ5 311 aa11.7□□□□□ -0.54
DUBR-204ENST00000490441 FAM124AQ86V42 546 aa11.7□□□□□ -0.54
DUBR-204ENST00000490441 OR2I1PQ8NGU4 316 aa11.7□□□□□ -0.54
DUBR-204ENST00000490441 DNASE2BQ8WZ79 361 aa11.7□□□□□ -0.54
DUBR-204ENST00000490441 SNX19Q92543 992 aa11.7□□□□□ -0.54
DUBR-204ENST00000490441 FAM149B1Q96BN6 582 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms