RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 CACNG3O60359 315 aa11□□□□□ -0.65
SCAMP4-208ENST00000489554 LRP3O75074 770 aa11□□□□□ -0.65
SCAMP4-208ENST00000489554 RTN2O75298 545 aa11□□□□□ -0.65
SCAMP4-208ENST00000489554 ERBB2P04626 1255 aa11□□□□□ -0.65
SCAMP4-208ENST00000489554 CHKAP35790 457 aa11□□□□□ -0.65
SCAMP4-208ENST00000489554 ARHGAP25P42331 645 aa11□□□□□ -0.65
SCAMP4-208ENST00000489554 KIR2DL1P43626 348 aaPredicted RBP11□□□□□ -0.65
SCAMP4-208ENST00000489554 GABRB2P47870 512 aa11□□□□□ -0.65
SCAMP4-208ENST00000489554 PXNP49023 591 aaPredicted RBP11□□□□□ -0.65
SCAMP4-208ENST00000489554 DGKEP52429 567 aa11□□□□□ -0.65
SCAMP4-208ENST00000489554 SRSF5Q13243 272 aaKnown RBP11□□□□□ -0.65
SCAMP4-208ENST00000489554 LPAL2Q16609 132 aa11□□□□□ -0.65
SCAMP4-208ENST00000489554 C2CD6Q53TS8 623 aa11□□□□□ -0.65
SCAMP4-208ENST00000489554 EOGTQ5NDL2 527 aa11□□□□□ -0.65
SCAMP4-208ENST00000489554 CCDC122Q5T0U0 273 aa11□□□□□ -0.65
SCAMP4-208ENST00000489554 GRAMD4Q6IC98 578 aa11□□□□□ -0.65
SCAMP4-208ENST00000489554 TRMT11Q7Z4G4 463 aaKnown RBP11□□□□□ -0.65
SCAMP4-208ENST00000489554 REXO1L1PQ8IX06 675 aa11□□□□□ -0.65
SCAMP4-208ENST00000489554 MCOLN2Q8IZK6 566 aa11□□□□□ -0.65
SCAMP4-208ENST00000489554 NAT16Q8N8M0 369 aa11□□□□□ -0.65
SCAMP4-208ENST00000489554 TERB1Q8NA31 727 aa11□□□□□ -0.65
SCAMP4-208ENST00000489554 TMEM35BQ8NCS4 154 aa11□□□□□ -0.65
SCAMP4-208ENST00000489554 STK32AQ8WU08 396 aa11□□□□□ -0.65
SCAMP4-208ENST00000489554 RNF139Q8WU17 664 aa11□□□□□ -0.65
SCAMP4-208ENST00000489554 ARHGEF26Q96DR7 871 aa11□□□□□ -0.65
SCAMP4-208ENST00000489554 BBS2Q9BXC9 721 aa11□□□□□ -0.65
SCAMP4-208ENST00000489554 LACRTQ9GZZ8 138 aa11□□□□□ -0.65
SCAMP4-208ENST00000489554 DEF6Q9H4E7 631 aa11□□□□□ -0.65
SCAMP4-208ENST00000489554 POLR3BQ9NW08 1133 aaPredicted RBP11□□□□□ -0.65
SCAMP4-208ENST00000489554 MARCH2Q9P0N8 246 aa11□□□□□ -0.65
SCAMP4-208ENST00000489554 SALL4Q9UJQ4 1053 aa11□□□□□ -0.65
SCAMP4-208ENST00000489554 PPP2R2CQ9Y2T4 447 aa11□□□□□ -0.65
SCAMP4-208ENST00000489554 PCDHA13Q9Y5I0 950 aa11□□□□□ -0.65
SCAMP4-208ENST00000489554 ALDH1A2O94788 518 aa10.99□□□□□ -0.65
SCAMP4-208ENST00000489554 KLF8O95600 359 aaPredicted RBP10.99□□□□□ -0.65
SCAMP4-208ENST00000489554 FTLP02792 175 aaPredicted RBP10.99□□□□□ -0.65
SCAMP4-208ENST00000489554 TYRP14679 529 aa10.99□□□□□ -0.65
SCAMP4-208ENST00000489554 CORO1AP31146 461 aaKnown RBP10.99□□□□□ -0.65
SCAMP4-208ENST00000489554 HOXC13P31276 330 aa10.99□□□□□ -0.65
SCAMP4-208ENST00000489554 TIE1P35590 1138 aa10.99□□□□□ -0.65
SCAMP4-208ENST00000489554 ID4P47928 161 aa10.99□□□□□ -0.65
SCAMP4-208ENST00000489554 RGS7P49802 495 aa10.99□□□□□ -0.65
SCAMP4-208ENST00000489554 VAV2P52735 878 aa10.99□□□□□ -0.65
SCAMP4-208ENST00000489554 GALCP54803 685 aa10.99□□□□□ -0.65
SCAMP4-208ENST00000489554 GSCP56915 257 aaPredicted RBP10.99□□□□□ -0.65
SCAMP4-208ENST00000489554 LMNB2Q03252 620 aa10.99□□□□□ -0.65
SCAMP4-208ENST00000489554 MESP2Q0VG99 397 aa10.99□□□□□ -0.65
SCAMP4-208ENST00000489554 CRY1Q16526 586 aa10.99□□□□□ -0.65
SCAMP4-208ENST00000489554 C10orf76Q5T2E6 689 aa10.99□□□□□ -0.65
SCAMP4-208ENST00000489554 BSPRYQ5W0U4 402 aa10.99□□□□□ -0.65
SCAMP4-208ENST00000489554 MMS22LQ6ZRQ5 1243 aa10.99□□□□□ -0.65
SCAMP4-208ENST00000489554 TPGS1Q6ZTW0 290 aa10.99□□□□□ -0.65
SCAMP4-208ENST00000489554 BHLHA9Q7RTU4 235 aa10.99□□□□□ -0.65
SCAMP4-208ENST00000489554 TMEM110Q86TL2 294 aa10.99□□□□□ -0.65
SCAMP4-208ENST00000489554 C11orf74Q86VG3 221 aa10.99□□□□□ -0.65
SCAMP4-208ENST00000489554 VPS36Q86VN1 386 aa10.99□□□□□ -0.65
SCAMP4-208ENST00000489554 C17orf53Q8N3J3 647 aaPredicted RBP10.99□□□□□ -0.65
SCAMP4-208ENST00000489554 CCDC33Q8N5R6 958 aa10.99□□□□□ -0.65
SCAMP4-208ENST00000489554 FAM160A2Q8N612 972 aaPredicted RBP10.99□□□□□ -0.65
SCAMP4-208ENST00000489554 ALLCQ8N6M5 410 aa10.99□□□□□ -0.65
SCAMP4-208ENST00000489554 IL17RCQ8NAC3 791 aa10.99□□□□□ -0.65
SCAMP4-208ENST00000489554 IRGQQ8WZA9 623 aa10.99□□□□□ -0.65
SCAMP4-208ENST00000489554 PLD4Q96BZ4 506 aa10.99□□□□□ -0.65
SCAMP4-208ENST00000489554 PIWIL1Q96J94 861 aaKnown RBP10.99□□□□□ -0.65
SCAMP4-208ENST00000489554 LOXL4Q96JB6 756 aa10.99□□□□□ -0.65
SCAMP4-208ENST00000489554 HSFY1Q96LI6 401 aa10.99□□□□□ -0.65
SCAMP4-208ENST00000489554 THAP2Q9H0W7 228 aa10.99□□□□□ -0.65
SCAMP4-208ENST00000489554 ABCC13Q9NSE7 274 aa10.99□□□□□ -0.65
SCAMP4-208ENST00000489554 SEPT11Q9NVA2 429 aaKnown RBP10.99□□□□□ -0.65
SCAMP4-208ENST00000489554 DNAJC17Q9NVM6 304 aaKnown RBP10.99□□□□□ -0.65
SCAMP4-208ENST00000489554 USP18Q9UMW8 372 aa10.99□□□□□ -0.65
SCAMP4-208ENST00000489554 HBS1LQ9Y450 684 aaKnown RBP10.99□□□□□ -0.65
SCAMP4-208ENST00000489554 PAXBP1Q9Y5B6 917 aa10.99□□□□□ -0.65
SCAMP4-208ENST00000489554 SLC12A8A0AV02 714 aa10.98□□□□□ -0.65
SCAMP4-208ENST00000489554 YJEFN3A6XGL0 299 aa10.98□□□□□ -0.65
SCAMP4-208ENST00000489554 PRR5-ARHGAP8B1AHC4 643 aa10.98□□□□□ -0.65
SCAMP4-208ENST00000489554 E5RJQ4 531 aa10.98□□□□□ -0.65
SCAMP4-208ENST00000489554 E7ENQ6 273 aa10.98□□□□□ -0.65
SCAMP4-208ENST00000489554 PAPSS1O43252 624 aaPredicted RBP10.98□□□□□ -0.65
SCAMP4-208ENST00000489554 ATMINO43313 823 aaPredicted RBP10.98□□□□□ -0.65
SCAMP4-208ENST00000489554 FOXD2O60548 495 aaPredicted RBP10.98□□□□□ -0.65
SCAMP4-208ENST00000489554 FBXO21O94952 628 aa10.98□□□□□ -0.65
SCAMP4-208ENST00000489554 KLKB1P03952 638 aa10.98□□□□□ -0.65
SCAMP4-208ENST00000489554 HMBSP08397 361 aa10.98□□□□□ -0.65
SCAMP4-208ENST00000489554 TMEM253P0C7T8 217 aa10.98□□□□□ -0.65
SCAMP4-208ENST00000489554 CHRM1P11229 460 aaPredicted RBP10.98□□□□□ -0.65
SCAMP4-208ENST00000489554 LCP1P13796 627 aa10.98□□□□□ -0.65
SCAMP4-208ENST00000489554 SDHBP21912 280 aa10.98□□□□□ -0.65
SCAMP4-208ENST00000489554 MAGEA1P43355 309 aa10.98□□□□□ -0.65
SCAMP4-208ENST00000489554 NSFP46459 744 aaKnown RBP10.98□□□□□ -0.65
SCAMP4-208ENST00000489554 HARS2P49590 506 aaKnown RBP10.98□□□□□ -0.65
SCAMP4-208ENST00000489554 DAOAP59103 153 aa10.98□□□□□ -0.65
SCAMP4-208ENST00000489554 ARHGAP8P85298 464 aa10.98□□□□□ -0.65
SCAMP4-208ENST00000489554 C1QBPQ07021 282 aaKnown RBP10.98□□□□□ -0.65
SCAMP4-208ENST00000489554 TRIP4Q15650 581 aaPredicted RBP10.98□□□□□ -0.65
SCAMP4-208ENST00000489554 PPP1R15BQ5SWA1 713 aa10.98□□□□□ -0.65
SCAMP4-208ENST00000489554 ZNF662Q6ZS27 426 aa10.98□□□□□ -0.65
SCAMP4-208ENST00000489554 RASSF3Q86WH2 238 aa10.98□□□□□ -0.65
SCAMP4-208ENST00000489554 XYLT1Q86Y38 959 aa10.98□□□□□ -0.65
SCAMP4-208ENST00000489554 SFTPA1Q8IWL2 248 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms