RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 ARID3AQ99856 593 aa16.92■□□□□ 0.3
USP48-210ENST00000489108 UBE4BO95155 1302 aa16.92■□□□□ 0.3
USP48-210ENST00000489108 RPN1P04843 607 aaKnown RBP16.91■□□□□ 0.3
USP48-210ENST00000489108 AMPD3Q01432 767 aa16.91■□□□□ 0.3
USP48-210ENST00000489108 BNIP3Q12983 259 aa16.91■□□□□ 0.3
USP48-210ENST00000489108 SLC39A14Q15043 492 aa16.91■□□□□ 0.3
USP48-210ENST00000489108 E2F4Q16254 413 aa16.91■□□□□ 0.3
USP48-210ENST00000489108 TTC31Q49AM3 519 aaPredicted RBP16.91■□□□□ 0.3
USP48-210ENST00000489108 TAF1BQ53T94 588 aaPredicted RBP16.91■□□□□ 0.3
USP48-210ENST00000489108 ADIPOR2Q86V24 386 aa16.91■□□□□ 0.3
USP48-210ENST00000489108 ZC3H3Q8IXZ2 948 aaKnown RBP16.91■□□□□ 0.3
USP48-210ENST00000489108 GANCQ8TET4 914 aa16.91■□□□□ 0.3
USP48-210ENST00000489108 SKA1Q96BD8 255 aa16.91■□□□□ 0.3
USP48-210ENST00000489108 DUSP16Q9BY84 665 aa16.91■□□□□ 0.3
USP48-210ENST00000489108 MTG2Q9H4K7 406 aa16.91■□□□□ 0.3
USP48-210ENST00000489108 FBRSQ9HAH7 460 aa16.91■□□□□ 0.3
USP48-210ENST00000489108 ABCB8Q9NUT2 735 aa16.91■□□□□ 0.3
USP48-210ENST00000489108 CGNQ9P2M7 1197 aaKnown RBP16.91■□□□□ 0.3
USP48-210ENST00000489108 TFIP11Q9UBB9 837 aaKnown RBP16.91■□□□□ 0.3
USP48-210ENST00000489108 STRIP2Q9ULQ0 834 aa16.91■□□□□ 0.3
USP48-210ENST00000489108 NCKAP1Q9Y2A7 1128 aa16.91■□□□□ 0.3
USP48-210ENST00000489108 ARID1BQ8NFD5 2236 aaPredicted RBP16.9■□□□□ 0.3
USP48-210ENST00000489108 MYO18BQ8IUG5 2567 aa16.9■□□□□ 0.3
USP48-210ENST00000489108 ERVH48-1M5A8F1 160 aa16.9■□□□□ 0.3
USP48-210ENST00000489108 WNT9AO14904 365 aa16.9■□□□□ 0.3
USP48-210ENST00000489108 ASS1P00966 412 aaKnown RBP16.9■□□□□ 0.3
USP48-210ENST00000489108 TRIM21P19474 475 aaKnown RBP16.9■□□□□ 0.3
USP48-210ENST00000489108 ACTN2P35609 894 aa16.9■□□□□ 0.3
USP48-210ENST00000489108 GALCP54803 685 aa16.9■□□□□ 0.3
USP48-210ENST00000489108 EHHADHQ08426 723 aa16.9■□□□□ 0.3
USP48-210ENST00000489108 KCNH2Q12809 1159 aa16.9■□□□□ 0.3
USP48-210ENST00000489108 KNOP1Q1ED39 458 aaKnown RBP16.9■□□□□ 0.3
USP48-210ENST00000489108 ZACNQ401N2 412 aa16.9■□□□□ 0.3
USP48-210ENST00000489108 ZNF776Q68DI1 518 aaPredicted RBP16.9■□□□□ 0.3
USP48-210ENST00000489108 RSRC2Q7L4I2 434 aaKnown RBP16.9■□□□□ 0.3
USP48-210ENST00000489108 KIAA0907Q7Z7F0 614 aaPredicted RBP16.9■□□□□ 0.3
USP48-210ENST00000489108 ERICH1Q86X53 443 aa16.9■□□□□ 0.3
USP48-210ENST00000489108 WFIKKN2Q8TEU8 576 aa16.9■□□□□ 0.3
USP48-210ENST00000489108 TAF4BQ92750 862 aa16.9■□□□□ 0.3
USP48-210ENST00000489108 USP28Q96RU2 1077 aa16.9■□□□□ 0.3
USP48-210ENST00000489108 NT5C1AQ9BXI3 368 aa16.9■□□□□ 0.3
USP48-210ENST00000489108 SLC39A2Q9NP94 309 aa16.9■□□□□ 0.3
USP48-210ENST00000489108 AASDHPPTQ9NRN7 309 aa16.9■□□□□ 0.3
USP48-210ENST00000489108 FBXL12Q9NXK8 326 aa16.9■□□□□ 0.3
USP48-210ENST00000489108 PPP4R2Q9NY27 417 aa16.9■□□□□ 0.3
USP48-210ENST00000489108 SUN2Q9UH99 717 aa16.9■□□□□ 0.3
USP48-210ENST00000489108 COL6A6A6NMZ7 2263 aa16.9■□□□□ 0.3
USP48-210ENST00000489108 PYCARD-AS1I3L0S3 204 aa16.89■□□□□ 0.29
USP48-210ENST00000489108 GLDCP23378 1020 aa16.89■□□□□ 0.29
USP48-210ENST00000489108 CD38P28907 300 aa16.89■□□□□ 0.29
USP48-210ENST00000489108 CASP1P29466 404 aa16.89■□□□□ 0.29
USP48-210ENST00000489108 PDE4CQ08493 712 aa16.89■□□□□ 0.29
USP48-210ENST00000489108 INCA1Q0VD86 236 aa16.89■□□□□ 0.29
USP48-210ENST00000489108 TBC1D25Q3MII6 688 aa16.89■□□□□ 0.29
USP48-210ENST00000489108 PPP1R26Q5T8A7 1209 aaPredicted RBP16.89■□□□□ 0.29
USP48-210ENST00000489108 MBLAC2Q68D91 279 aa16.89■□□□□ 0.29
USP48-210ENST00000489108 CNNM4Q6P4Q7 775 aa16.89■□□□□ 0.29
USP48-210ENST00000489108 NCEH1Q6PIU2 408 aa16.89■□□□□ 0.29
USP48-210ENST00000489108 SV2AQ7L0J3 742 aa16.89■□□□□ 0.29
USP48-210ENST00000489108 GOLGA1Q92805 767 aa16.89■□□□□ 0.29
USP48-210ENST00000489108 DHX58Q96C10 678 aa16.89■□□□□ 0.29
USP48-210ENST00000489108 TMA16Q96EY4 203 aaKnown RBP16.89■□□□□ 0.29
USP48-210ENST00000489108 C7orf25Q9BPX7 421 aa16.89■□□□□ 0.29
USP48-210ENST00000489108 RSPH9Q9H1X1 276 aaPredicted RBP16.89■□□□□ 0.29
USP48-210ENST00000489108 PABPC3Q9H361 631 aaKnown RBP16.89■□□□□ 0.29
USP48-210ENST00000489108 SERGEFQ9UGK8 458 aa16.89■□□□□ 0.29
USP48-210ENST00000489108 GGA2Q9UJY4 613 aa16.89■□□□□ 0.29
USP48-210ENST00000489108 A0A1W2PR77 199 aa16.88■□□□□ 0.29
USP48-210ENST00000489108 HLA-DRAP01903 254 aa16.88■□□□□ 0.29
USP48-210ENST00000489108 DLDP09622 509 aaKnown RBP16.88■□□□□ 0.29
USP48-210ENST00000489108 PABPC1P11940 636 aaKnown RBP16.88■□□□□ 0.29
USP48-210ENST00000489108 EPHA8P29322 1005 aaPredicted RBP16.88■□□□□ 0.29
USP48-210ENST00000489108 YWHAGP61981 247 aaKnown RBP eCLIP16.88■□□□□ 0.29
USP48-210ENST00000489108 KCNJ12Q14500 433 aa16.88■□□□□ 0.29
USP48-210ENST00000489108 TRIP4Q15650 581 aaPredicted RBP16.88■□□□□ 0.29
USP48-210ENST00000489108 USP30Q70CQ3 517 aa16.88■□□□□ 0.29
USP48-210ENST00000489108 UNC13DQ70J99 1090 aa16.88■□□□□ 0.29
USP48-210ENST00000489108 FMNL3Q8IVF7 1028 aa16.88■□□□□ 0.29
USP48-210ENST00000489108 AHI1Q8N157 1196 aa16.88■□□□□ 0.29
USP48-210ENST00000489108 CACTIN-AS1Q8N1I8 211 aa16.88■□□□□ 0.29
USP48-210ENST00000489108 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.88■□□□□ 0.29
USP48-210ENST00000489108 PLD4Q96BZ4 506 aa16.88■□□□□ 0.29
USP48-210ENST00000489108 NAF1Q96HR8 494 aaKnown RBP16.88■□□□□ 0.29
USP48-210ENST00000489108 SEMA4CQ9C0C4 833 aa16.88■□□□□ 0.29
USP48-210ENST00000489108 NEUROG2Q9H2A3 272 aa16.88■□□□□ 0.29
USP48-210ENST00000489108 CUEDC2Q9H467 287 aa16.88■□□□□ 0.29
USP48-210ENST00000489108 GDF3Q9NR23 364 aa16.88■□□□□ 0.29
USP48-210ENST00000489108 DMAC2Q9NW81 257 aa16.88■□□□□ 0.29
USP48-210ENST00000489108 CLCA2Q9UQC9 943 aa16.88■□□□□ 0.29
USP48-210ENST00000489108 MORC2Q9Y6X9 1032 aaPredicted RBP16.88■□□□□ 0.29
USP48-210ENST00000489108 YKT6O15498 198 aa16.87■□□□□ 0.29
USP48-210ENST00000489108 ATP5BP06576 529 aaKnown RBP16.87■□□□□ 0.29
USP48-210ENST00000489108 CKMT2P17540 419 aa16.87■□□□□ 0.29
USP48-210ENST00000489108 CD58P19256 250 aa16.87■□□□□ 0.29
USP48-210ENST00000489108 POLR2EP19388 210 aaKnown RBP16.87■□□□□ 0.29
USP48-210ENST00000489108 ARRB1P49407 418 aaPredicted RBP16.87■□□□□ 0.29
USP48-210ENST00000489108 HARS2P49590 506 aaKnown RBP16.87■□□□□ 0.29
USP48-210ENST00000489108 INSM1Q01101 510 aaPredicted RBP16.87■□□□□ 0.29
USP48-210ENST00000489108 ILKQ13418 452 aa16.87■□□□□ 0.29
USP48-210ENST00000489108 ARHGAP18Q8N392 663 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms