RNA–Protein interactions for RNA: ENST00000489032.5

TRAPPC12-221, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-221ENST00000489032 DVL2O14641 736 aa8.69□□□□□ -1.02
TRAPPC12-221ENST00000489032 HNRNPDLO14979 420 aaKnown RBP8.69□□□□□ -1.02
TRAPPC12-221ENST00000489032 GPR39O43194 453 aa8.69□□□□□ -1.02
TRAPPC12-221ENST00000489032 B4GALT5O43286 388 aa8.69□□□□□ -1.02
TRAPPC12-221ENST00000489032 ZNF623O75123 536 aa8.69□□□□□ -1.02
TRAPPC12-221ENST00000489032 SMC2O95347 1197 aa8.69□□□□□ -1.02
TRAPPC12-221ENST00000489032 PDGFBP01127 241 aaPredicted RBP8.69□□□□□ -1.02
TRAPPC12-221ENST00000489032 GLDCP23378 1020 aa8.69□□□□□ -1.02
TRAPPC12-221ENST00000489032 NMT1P30419 496 aaKnown RBP8.69□□□□□ -1.02
TRAPPC12-221ENST00000489032 HOXA11P31270 313 aaPredicted RBP8.69□□□□□ -1.02
TRAPPC12-221ENST00000489032 LIG4P49917 911 aa8.69□□□□□ -1.02
TRAPPC12-221ENST00000489032 FAM189BP81408 668 aa8.69□□□□□ -1.02
TRAPPC12-221ENST00000489032 COASYQ13057 564 aa8.69□□□□□ -1.02
TRAPPC12-221ENST00000489032 ADAM15Q13444 863 aa8.69□□□□□ -1.02
TRAPPC12-221ENST00000489032 CUL4BQ13620 913 aa8.69□□□□□ -1.02
TRAPPC12-221ENST00000489032 BTG3Q14201 252 aaPredicted RBP8.69□□□□□ -1.02
TRAPPC12-221ENST00000489032 PTPN21Q16825 1174 aa8.69□□□□□ -1.02
TRAPPC12-221ENST00000489032 ZNF568Q3ZCX4 644 aa8.69□□□□□ -1.02
TRAPPC12-221ENST00000489032 GLB1LQ6UWU2 654 aa8.69□□□□□ -1.02
TRAPPC12-221ENST00000489032 SYCP3Q8IZU3 236 aa8.69□□□□□ -1.02
TRAPPC12-221ENST00000489032 SMRP1Q8NCR6 262 aa8.69□□□□□ -1.02
TRAPPC12-221ENST00000489032 URGCPQ8TCY9 931 aa8.69□□□□□ -1.02
TRAPPC12-221ENST00000489032 ASB15Q8WXK1 588 aa8.69□□□□□ -1.02
TRAPPC12-221ENST00000489032 PPP2R3CQ969Q6 453 aa8.69□□□□□ -1.02
TRAPPC12-221ENST00000489032 MSLNLQ96KJ4 702 aa8.69□□□□□ -1.02
TRAPPC12-221ENST00000489032 RPGRIP1Q96KN7 1286 aa8.69□□□□□ -1.02
TRAPPC12-221ENST00000489032 TIGD1Q96MW7 591 aa8.69□□□□□ -1.02
TRAPPC12-221ENST00000489032 ACCSQ96QU6 501 aa8.69□□□□□ -1.02
TRAPPC12-221ENST00000489032 C11orf84Q9BUA3 381 aaPredicted RBP8.69□□□□□ -1.02
TRAPPC12-221ENST00000489032 PHF7Q9BWX1 381 aaPredicted RBP8.69□□□□□ -1.02
TRAPPC12-221ENST00000489032 BLZF1Q9H2G9 400 aa8.69□□□□□ -1.02
TRAPPC12-221ENST00000489032 ST6GALNAC4Q9H4F1 302 aa8.69□□□□□ -1.02
TRAPPC12-221ENST00000489032 TMEM206Q9H813 350 aa8.69□□□□□ -1.02
TRAPPC12-221ENST00000489032 GCM1Q9NP62 436 aa8.69□□□□□ -1.02
TRAPPC12-221ENST00000489032 OLFML3Q9NRN5 406 aa8.69□□□□□ -1.02
TRAPPC12-221ENST00000489032 TBC1D7Q9P0N9 293 aa8.69□□□□□ -1.02
TRAPPC12-221ENST00000489032 TBX20Q9UMR3 447 aa8.69□□□□□ -1.02
TRAPPC12-221ENST00000489032 TNFSF13BQ9Y275 285 aa8.69□□□□□ -1.02
TRAPPC12-221ENST00000489032 TPRP12270 2363 aaKnown RBP8.68□□□□□ -1.02
TRAPPC12-221ENST00000489032 LINC01565O15544 149 aa8.68□□□□□ -1.02
TRAPPC12-221ENST00000489032 CLDN3O15551 220 aa8.68□□□□□ -1.02
TRAPPC12-221ENST00000489032 CYP7B1O75881 506 aa8.68□□□□□ -1.02
TRAPPC12-221ENST00000489032 KIF20AO95235 890 aa8.68□□□□□ -1.02
TRAPPC12-221ENST00000489032 RB1P06400 928 aa8.68□□□□□ -1.02
TRAPPC12-221ENST00000489032 PTX3P26022 381 aaPredicted RBP8.68□□□□□ -1.02
TRAPPC12-221ENST00000489032 CTNNB1P35222 781 aa8.68□□□□□ -1.02
TRAPPC12-221ENST00000489032 LIMS1P48059 325 aa8.68□□□□□ -1.02
TRAPPC12-221ENST00000489032 GUCY2FP51841 1108 aa8.68□□□□□ -1.02
TRAPPC12-221ENST00000489032 SESN3P58005 492 aa8.68□□□□□ -1.02
TRAPPC12-221ENST00000489032 GTF2BQ00403 316 aa8.68□□□□□ -1.02
TRAPPC12-221ENST00000489032 PFKPQ01813 784 aa8.68□□□□□ -1.02
TRAPPC12-221ENST00000489032 POSTNQ15063 836 aa8.68□□□□□ -1.02
TRAPPC12-221ENST00000489032 KYAT1Q16773 422 aa8.68□□□□□ -1.02
TRAPPC12-221ENST00000489032 ST3GAL2Q16842 350 aa8.68□□□□□ -1.02
TRAPPC12-221ENST00000489032 FAM26FQ5R3K3 315 aa8.68□□□□□ -1.02
TRAPPC12-221ENST00000489032 SPOUT1Q5T280 376 aaKnown RBP8.68□□□□□ -1.02
TRAPPC12-221ENST00000489032 NT5DC1Q5TFE4 455 aa8.68□□□□□ -1.02
TRAPPC12-221ENST00000489032 ATG14Q6ZNE5 492 aa8.68□□□□□ -1.02
TRAPPC12-221ENST00000489032 ZNF720Q7Z2F6 126 aa8.68□□□□□ -1.02
TRAPPC12-221ENST00000489032 GRAMD1CQ8IYS0 662 aa8.68□□□□□ -1.02
TRAPPC12-221ENST00000489032 KIAA2013Q8IYS2 634 aa8.68□□□□□ -1.02
TRAPPC12-221ENST00000489032 CMTR2Q8IYT2 770 aaKnown RBP8.68□□□□□ -1.02
TRAPPC12-221ENST00000489032 TMEM105Q8N8V8 129 aa8.68□□□□□ -1.02
TRAPPC12-221ENST00000489032 CALML6Q8TD86 181 aa8.68□□□□□ -1.02
TRAPPC12-221ENST00000489032 ACO2Q99798 780 aaKnown RBP8.68□□□□□ -1.02
TRAPPC12-221ENST00000489032 APOL6Q9BWW8 343 aa8.68□□□□□ -1.02
TRAPPC12-221ENST00000489032 MRPL9Q9BYD2 267 aaKnown RBP8.68□□□□□ -1.02
TRAPPC12-221ENST00000489032 TMEM117Q9H0C3 514 aa8.68□□□□□ -1.02
TRAPPC12-221ENST00000489032 PDZD7Q9H5P4 517 aa8.68□□□□□ -1.02
TRAPPC12-221ENST00000489032 RSAD1Q9HA92 442 aa8.68□□□□□ -1.02
TRAPPC12-221ENST00000489032 SLC39A2Q9NP94 309 aa8.68□□□□□ -1.02
TRAPPC12-221ENST00000489032 DLL4Q9NR61 685 aa8.68□□□□□ -1.02
TRAPPC12-221ENST00000489032 RMND1Q9NWS8 449 aa8.68□□□□□ -1.02
TRAPPC12-221ENST00000489032 CNOT6Q9ULM6 557 aaKnown RBP8.68□□□□□ -1.02
TRAPPC12-221ENST00000489032 IPPQ9Y573 584 aa8.68□□□□□ -1.02
TRAPPC12-221ENST00000489032 PMF1-BGLAPU3KQ54 211 aa8.68□□□□□ -1.02
TRAPPC12-221ENST00000489032 GOLGA6L3A6NEY3 463 aa8.67□□□□□ -1.02
TRAPPC12-221ENST00000489032 TBKBP1A7MCY6 615 aa8.67□□□□□ -1.02
TRAPPC12-221ENST00000489032 C5orf67F2Z3F1 127 aa8.67□□□□□ -1.02
TRAPPC12-221ENST00000489032 GRM6O15303 877 aa8.67□□□□□ -1.02
TRAPPC12-221ENST00000489032 EIF3DO15371 548 aaKnown RBP eCLIP8.67□□□□□ -1.02
TRAPPC12-221ENST00000489032 TOM1L1O75674 476 aa8.67□□□□□ -1.02
TRAPPC12-221ENST00000489032 FBXO21O94952 628 aa8.67□□□□□ -1.02
TRAPPC12-221ENST00000489032 UBE4BO95155 1302 aa8.67□□□□□ -1.02
TRAPPC12-221ENST00000489032 RPN1P04843 607 aaKnown RBP8.67□□□□□ -1.02
TRAPPC12-221ENST00000489032 MCF2P10911 925 aa8.67□□□□□ -1.02
TRAPPC12-221ENST00000489032 HARSP12081 509 aaKnown RBP8.67□□□□□ -1.02
TRAPPC12-221ENST00000489032 AOAHP28039 575 aa8.67□□□□□ -1.02
TRAPPC12-221ENST00000489032 CDKN1CP49918 316 aaPredicted RBP8.67□□□□□ -1.02
TRAPPC12-221ENST00000489032 TTC3P53804 2025 aa8.67□□□□□ -1.02
TRAPPC12-221ENST00000489032 RNASELQ05823 741 aaKnown RBP8.67□□□□□ -1.02
TRAPPC12-221ENST00000489032 MESP2Q0VG99 397 aa8.67□□□□□ -1.02
TRAPPC12-221ENST00000489032 NOLC1Q14978 699 aaKnown RBP eCLIP8.67□□□□□ -1.02
TRAPPC12-221ENST00000489032 ZC2HC1CQ53FD0 456 aaPredicted RBP8.67□□□□□ -1.02
TRAPPC12-221ENST00000489032 CATSPEREQ5SY80 951 aa8.67□□□□□ -1.02
TRAPPC12-221ENST00000489032 UBXN11Q5T124 520 aa8.67□□□□□ -1.02
TRAPPC12-221ENST00000489032 BROXQ5VW32 411 aa8.67□□□□□ -1.02
TRAPPC12-221ENST00000489032 SLFN12LQ6IEE8 588 aa8.67□□□□□ -1.02
TRAPPC12-221ENST00000489032 CFAP47Q6ZTR5 3102 aa8.67□□□□□ -1.02
TRAPPC12-221ENST00000489032 MRPL10Q7Z7H8 261 aaKnown RBP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms