RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 PQLC3Q8N755 202 aa13.17□□□□□ -0.3
NELFE-209ENST00000488426 ATAD1Q8NBU5 361 aa13.17□□□□□ -0.3
NELFE-209ENST00000488426 BBOF1Q8ND07 529 aa13.17□□□□□ -0.3
NELFE-209ENST00000488426 PCDH19Q8TAB3 1148 aa13.17□□□□□ -0.3
NELFE-209ENST00000488426 SUSD6Q92537 303 aa13.17□□□□□ -0.3
NELFE-209ENST00000488426 EDEM1Q92611 657 aa13.17□□□□□ -0.3
NELFE-209ENST00000488426 P3H4Q92791 437 aa13.17□□□□□ -0.3
NELFE-209ENST00000488426 LRRC45Q96CN5 670 aa13.17□□□□□ -0.3
NELFE-209ENST00000488426 GDAP1L1Q96MZ0 367 aa13.17□□□□□ -0.3
NELFE-209ENST00000488426 KCTD15Q96SI1 283 aaPredicted RBP13.17□□□□□ -0.3
NELFE-209ENST00000488426 HERC2P3Q9BVR0 1158 aa13.17□□□□□ -0.3
NELFE-209ENST00000488426 MTRF1LQ9UGC7 380 aaKnown RBP13.17□□□□□ -0.3
NELFE-209ENST00000488426 FBXW11Q9UKB1 542 aa13.17□□□□□ -0.3
NELFE-209ENST00000488426 HPCAL4Q9UM19 191 aa13.17□□□□□ -0.3
NELFE-209ENST00000488426 GREB1Q4ZG55 1949 aa13.16□□□□□ -0.3
NELFE-209ENST00000488426 FAM92AA1XBS5 289 aa13.16□□□□□ -0.3
NELFE-209ENST00000488426 H3BRJ5 948 aa13.16□□□□□ -0.3
NELFE-209ENST00000488426 NDC80O14777 642 aa13.16□□□□□ -0.3
NELFE-209ENST00000488426 IGLV3-25P01717 112 aa13.16□□□□□ -0.3
NELFE-209ENST00000488426 KRT14P02533 472 aa13.16□□□□□ -0.3
NELFE-209ENST00000488426 CNPP09543 421 aaKnown RBP13.16□□□□□ -0.3
NELFE-209ENST00000488426 HAPLN1P10915 354 aaPredicted RBP13.16□□□□□ -0.3
NELFE-209ENST00000488426 KLRC2P26717 231 aa13.16□□□□□ -0.3
NELFE-209ENST00000488426 ADRA1BP35368 520 aa13.16□□□□□ -0.3
NELFE-209ENST00000488426 HSPA9P38646 679 aaKnown RBP13.16□□□□□ -0.3
NELFE-209ENST00000488426 CXCR3P49682 368 aa13.16□□□□□ -0.3
NELFE-209ENST00000488426 ZNF135P52742 658 aaPredicted RBP13.16□□□□□ -0.3
NELFE-209ENST00000488426 ARPP19P56211 112 aa13.16□□□□□ -0.3
NELFE-209ENST00000488426 EIF3EP60228 445 aaKnown RBP13.16□□□□□ -0.3
NELFE-209ENST00000488426 RPL10AP62906 217 aaKnown RBP13.16□□□□□ -0.3
NELFE-209ENST00000488426 CAV1Q03135 178 aa13.16□□□□□ -0.3
NELFE-209ENST00000488426 GPS2Q13227 327 aa13.16□□□□□ -0.3
NELFE-209ENST00000488426 DDR2Q16832 855 aa13.16□□□□□ -0.3
NELFE-209ENST00000488426 ARL13BQ3SXY8 428 aa13.16□□□□□ -0.3
NELFE-209ENST00000488426 BTBD8Q5XKL5 378 aa13.16□□□□□ -0.3
NELFE-209ENST00000488426 KIAA1841Q6NSI8 718 aa13.16□□□□□ -0.3
NELFE-209ENST00000488426 PRSS55Q6UWB4 352 aaPredicted RBP13.16□□□□□ -0.3
NELFE-209ENST00000488426 RNF19BQ6ZMZ0 732 aa13.16□□□□□ -0.3
NELFE-209ENST00000488426 MON1AQ86VX9 555 aa13.16□□□□□ -0.3
NELFE-209ENST00000488426 PLD5Q8N7P1 536 aa13.16□□□□□ -0.3
NELFE-209ENST00000488426 DQX1Q8TE96 717 aaKnown RBP13.16□□□□□ -0.3
NELFE-209ENST00000488426 RIN2Q8WYP3 895 aaPredicted RBP13.16□□□□□ -0.3
NELFE-209ENST00000488426 ART4Q93070 314 aa13.16□□□□□ -0.3
NELFE-209ENST00000488426 CSPG4P5Q96PW8 444 aa13.16□□□□□ -0.3
NELFE-209ENST00000488426 CDCA3Q99618 268 aaPredicted RBP13.16□□□□□ -0.3
NELFE-209ENST00000488426 SMOC2Q9H3U7 446 aa13.16□□□□□ -0.3
NELFE-209ENST00000488426 PCDH9Q9HC56 1237 aa13.16□□□□□ -0.3
NELFE-209ENST00000488426 OGFRQ9NZT2 677 aa13.16□□□□□ -0.3
NELFE-209ENST00000488426 STK39Q9UEW8 545 aa13.16□□□□□ -0.3
NELFE-209ENST00000488426 IRAK3Q9Y616 596 aa13.16□□□□□ -0.3
NELFE-209ENST00000488426 CDY1Q9Y6F8 540 aa13.16□□□□□ -0.3
NELFE-209ENST00000488426 SYNJ2BP-COX16A0A087WUM0 186 aa13.16□□□□□ -0.3
NELFE-209ENST00000488426 PECAM1P16284 738 aaPredicted RBP13.16□□□□□ -0.3
NELFE-209ENST00000488426 SP100P23497 879 aaPredicted RBP13.16□□□□□ -0.3
NELFE-209ENST00000488426 IVDP26440 423 aa13.16□□□□□ -0.3
NELFE-209ENST00000488426 NR2C2P49116 596 aa13.16□□□□□ -0.3
NELFE-209ENST00000488426 PLTPP55058 493 aa13.16□□□□□ -0.3
NELFE-209ENST00000488426 DSG1Q02413 1049 aa13.16□□□□□ -0.3
NELFE-209ENST00000488426 SCD5Q86SK9 330 aa13.16□□□□□ -0.3
NELFE-209ENST00000488426 TAC4Q86UU9 113 aa13.16□□□□□ -0.3
NELFE-209ENST00000488426 TTC9BQ8N6N2 239 aa13.16□□□□□ -0.3
NELFE-209ENST00000488426 FBXO25Q8TCJ0 367 aa13.16□□□□□ -0.3
NELFE-209ENST00000488426 SLC22A17Q8WUG5 538 aa13.16□□□□□ -0.3
NELFE-209ENST00000488426 KLHL5Q96PQ7 755 aa13.16□□□□□ -0.3
NELFE-209ENST00000488426 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.16□□□□□ -0.3
NELFE-209ENST00000488426 COX16Q9P0S2 106 aa13.16□□□□□ -0.3
NELFE-209ENST00000488426 HSFX1Q9UBD0 423 aa13.16□□□□□ -0.3
NELFE-209ENST00000488426 SAE1Q9UBE0 346 aaPredicted RBP13.16□□□□□ -0.3
NELFE-209ENST00000488426 ZNF638Q14966 1978 aaKnown RBP13.16□□□□□ -0.3
NELFE-209ENST00000488426 MYO10Q9HD67 2058 aa13.15□□□□□ -0.3
NELFE-209ENST00000488426 SGK1O00141 431 aa13.15□□□□□ -0.3
NELFE-209ENST00000488426 IRAK2O43187 625 aa13.15□□□□□ -0.3
NELFE-209ENST00000488426 VNN2O95498 520 aa13.15□□□□□ -0.3
NELFE-209ENST00000488426 RBP3P10745 1247 aa13.15□□□□□ -0.3
NELFE-209ENST00000488426 ADCY8P40145 1251 aa13.15□□□□□ -0.3
NELFE-209ENST00000488426 GLUD2P49448 558 aa13.15□□□□□ -0.3
NELFE-209ENST00000488426 GPR15P49685 360 aa13.15□□□□□ -0.3
NELFE-209ENST00000488426 ROR1Q01973 937 aa13.15□□□□□ -0.3
NELFE-209ENST00000488426 IFRD2Q12894 506 aaPredicted RBP13.15□□□□□ -0.3
NELFE-209ENST00000488426 EIF4EBP2Q13542 120 aaPredicted RBP13.15□□□□□ -0.3
NELFE-209ENST00000488426 MTMR3Q13615 1198 aa13.15□□□□□ -0.3
NELFE-209ENST00000488426 MGAT5BQ3V5L5 792 aa13.15□□□□□ -0.3
NELFE-209ENST00000488426 SPDYCQ5MJ68 293 aa13.15□□□□□ -0.3
NELFE-209ENST00000488426 ALS2CLQ60I27 953 aa13.15□□□□□ -0.3
NELFE-209ENST00000488426 MSANTD2Q6P1R3 559 aa13.15□□□□□ -0.3
NELFE-209ENST00000488426 DENND5BQ6ZUT9 1274 aa13.15□□□□□ -0.3
NELFE-209ENST00000488426 GPR65Q8IYL9 337 aa13.15□□□□□ -0.3
NELFE-209ENST00000488426 ADAM32Q8TC27 787 aa13.15□□□□□ -0.3
NELFE-209ENST00000488426 RNF139Q8WU17 664 aa13.15□□□□□ -0.3
NELFE-209ENST00000488426 SEPT5Q99719 369 aaPredicted RBP13.15□□□□□ -0.3
NELFE-209ENST00000488426 TSPYL1Q9H0U9 437 aa13.15□□□□□ -0.3
NELFE-209ENST00000488426 WDCPQ9H6R7 721 aa13.15□□□□□ -0.3
NELFE-209ENST00000488426 CWC15Q9P013 229 aaKnown RBP13.15□□□□□ -0.3
NELFE-209ENST00000488426 PRKAG3Q9UGI9 489 aa13.15□□□□□ -0.3
NELFE-209ENST00000488426 WDR27A2RRH5 827 aa13.14□□□□□ -0.31
NELFE-209ENST00000488426 CFAP69A5D8W1 941 aa13.14□□□□□ -0.31
NELFE-209ENST00000488426 YWHAQP27348 245 aa13.14□□□□□ -0.31
NELFE-209ENST00000488426 STIP1P31948 543 aaKnown RBP13.14□□□□□ -0.31
NELFE-209ENST00000488426 HCAR3P49019 387 aa13.14□□□□□ -0.31
NELFE-209ENST00000488426 TUFMP49411 452 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms