RNA–Protein interactions for RNA: ENST00000488235.1

PCYT1A-215, Transcript of phosphate cytidylyltransferase 1, choline, alpha, human

TSL 3

Gene PCYT1A, Length 466 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCYT1A-215	ENST00000488235	CD70	P32970	193 aa		11.69	□□□□□ -0.54
PCYT1A-215	ENST00000488235	HOXD12	P35452	270 aa		11.69	□□□□□ -0.54
PCYT1A-215	ENST00000488235	GPD2	P43304	727 aa		11.69	□□□□□ -0.54
PCYT1A-215	ENST00000488235	RPL34	P49207	117 aa	Known RBP	11.69	□□□□□ -0.54
PCYT1A-215	ENST00000488235	MARS	P56192	900 aa	Known RBP	11.69	□□□□□ -0.54
PCYT1A-215	ENST00000488235	PITX1	P78337	314 aa	Predicted RBP	11.69	□□□□□ -0.54
PCYT1A-215	ENST00000488235	GCNT1	Q02742	428 aa		11.69	□□□□□ -0.54
PCYT1A-215	ENST00000488235	FOXC1	Q12948	553 aa		11.69	□□□□□ -0.54
PCYT1A-215	ENST00000488235	PAK1	Q13153	545 aa		11.69	□□□□□ -0.54
PCYT1A-215	ENST00000488235	SEMA3B	Q13214	749 aa		11.69	□□□□□ -0.54
PCYT1A-215	ENST00000488235	STARD3	Q14849	445 aa		11.69	□□□□□ -0.54
PCYT1A-215	ENST00000488235	ADGRF1	Q5T601	910 aa		11.69	□□□□□ -0.54
PCYT1A-215	ENST00000488235	PIK3R6	Q5UE93	754 aa		11.69	□□□□□ -0.54
PCYT1A-215	ENST00000488235	FOXR2	Q6PJQ5	311 aa		11.69	□□□□□ -0.54
PCYT1A-215	ENST00000488235	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	11.69	□□□□□ -0.54
PCYT1A-215	ENST00000488235	PIP4P1	Q86T03	277 aa		11.69	□□□□□ -0.54
PCYT1A-215	ENST00000488235	SCUBE3	Q8IX30	993 aa		11.69	□□□□□ -0.54
PCYT1A-215	ENST00000488235	MINDY1	Q8N5J2	469 aa		11.69	□□□□□ -0.54
PCYT1A-215	ENST00000488235	ADAM32	Q8TC27	787 aa		11.69	□□□□□ -0.54
PCYT1A-215	ENST00000488235	DQX1	Q8TE96	717 aa	Known RBP	11.69	□□□□□ -0.54
PCYT1A-215	ENST00000488235	IRGQ	Q8WZA9	623 aa		11.69	□□□□□ -0.54
PCYT1A-215	ENST00000488235	LMLN	Q96KR4	655 aa		11.69	□□□□□ -0.54
PCYT1A-215	ENST00000488235	FCRL2	Q96LA5	508 aa	Predicted RBP	11.69	□□□□□ -0.54
PCYT1A-215	ENST00000488235	CAMK1G	Q96NX5	476 aa		11.69	□□□□□ -0.54
PCYT1A-215	ENST00000488235	CRACR2A	Q9BSW2	395 aa		11.69	□□□□□ -0.54
PCYT1A-215	ENST00000488235	GPR174	Q9BXC1	333 aa		11.69	□□□□□ -0.54
PCYT1A-215	ENST00000488235	SLC2A11	Q9BYW1	496 aa		11.69	□□□□□ -0.54
PCYT1A-215	ENST00000488235	GTPBP4	Q9BZE4	634 aa	Known RBP	11.69	□□□□□ -0.54
PCYT1A-215	ENST00000488235	TMEM245	Q9H330	911 aa		11.69	□□□□□ -0.54
PCYT1A-215	ENST00000488235	MTG2	Q9H4K7	406 aa		11.69	□□□□□ -0.54
PCYT1A-215	ENST00000488235	ITM2C	Q9NQX7	267 aa		11.69	□□□□□ -0.54
PCYT1A-215	ENST00000488235	TJP2	Q9UDY2	1190 aa		11.69	□□□□□ -0.54
PCYT1A-215	ENST00000488235	XPO7	Q9UIA9	1087 aa	Known RBP	11.69	□□□□□ -0.54
PCYT1A-215	ENST00000488235	AJAP1	Q9UKB5	411 aa	Predicted RBP	11.69	□□□□□ -0.54
PCYT1A-215	ENST00000488235	CNTN6	Q9UQ52	1028 aa		11.69	□□□□□ -0.54
PCYT1A-215	ENST00000488235	NAALADL1	Q9UQQ1	740 aa		11.69	□□□□□ -0.54
PCYT1A-215	ENST00000488235	PCNX2	A6NKB5	2137 aa		11.69	□□□□□ -0.54
PCYT1A-215	ENST00000488235	KNL1	Q8NG31	2342 aa		11.69	□□□□□ -0.54
PCYT1A-215	ENST00000488235	SPAAR	A0A1B0GVQ0	90 aa		11.68	□□□□□ -0.54
PCYT1A-215	ENST00000488235	BECN2	A8MW95	431 aa		11.68	□□□□□ -0.54
PCYT1A-215	ENST00000488235	C1QTNF9B	B2RNN3	333 aa		11.68	□□□□□ -0.54
PCYT1A-215	ENST00000488235	P4HA2	O15460	535 aa		11.68	□□□□□ -0.54
PCYT1A-215	ENST00000488235	PAPSS1	O43252	624 aa	Predicted RBP	11.68	□□□□□ -0.54
PCYT1A-215	ENST00000488235	EPHX1	P07099	455 aa		11.68	□□□□□ -0.54
PCYT1A-215	ENST00000488235	C1QTNF9	P0C862	333 aa		11.68	□□□□□ -0.54
PCYT1A-215	ENST00000488235	CEACAM1	P13688	526 aa		11.68	□□□□□ -0.54
PCYT1A-215	ENST00000488235	CD59	P13987	128 aa		11.68	□□□□□ -0.54
PCYT1A-215	ENST00000488235	GFPT1	Q06210	699 aa	Predicted RBP	11.68	□□□□□ -0.54
PCYT1A-215	ENST00000488235	EIF4H	Q15056	248 aa	Known RBP	11.68	□□□□□ -0.54
PCYT1A-215	ENST00000488235	TAF5	Q15542	800 aa		11.68	□□□□□ -0.54
PCYT1A-215	ENST00000488235	CAMK4	Q16566	473 aa		11.68	□□□□□ -0.54
PCYT1A-215	ENST00000488235	ST3GAL2	Q16842	350 aa		11.68	□□□□□ -0.54
PCYT1A-215	ENST00000488235	SYPL2	Q5VXT5	272 aa		11.68	□□□□□ -0.54
PCYT1A-215	ENST00000488235	SERPINA13P	Q6UXR4	307 aa		11.68	□□□□□ -0.54
PCYT1A-215	ENST00000488235	MMS22L	Q6ZRQ5	1243 aa		11.68	□□□□□ -0.54
PCYT1A-215	ENST00000488235	CHST9	Q7L1S5	443 aa		11.68	□□□□□ -0.54
PCYT1A-215	ENST00000488235	METTL3	Q86U44	580 aa	Known RBP	11.68	□□□□□ -0.54
PCYT1A-215	ENST00000488235	FAM124A	Q86V42	546 aa		11.68	□□□□□ -0.54
PCYT1A-215	ENST00000488235	IRF2BP1	Q8IU81	584 aa		11.68	□□□□□ -0.54
PCYT1A-215	ENST00000488235	RGL4	Q8IZJ4	473 aa		11.68	□□□□□ -0.54
PCYT1A-215	ENST00000488235	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	11.68	□□□□□ -0.54
PCYT1A-215	ENST00000488235	TMA16	Q96EY4	203 aa	Known RBP	11.68	□□□□□ -0.54
PCYT1A-215	ENST00000488235	SIPA1	Q96FS4	1042 aa		11.68	□□□□□ -0.54
PCYT1A-215	ENST00000488235	MYO19	Q96H55	970 aa		11.68	□□□□□ -0.54
PCYT1A-215	ENST00000488235	SLC39A13	Q96H72	371 aa		11.68	□□□□□ -0.54
PCYT1A-215	ENST00000488235	HSFY1	Q96LI6	401 aa		11.68	□□□□□ -0.54
PCYT1A-215	ENST00000488235	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	11.68	□□□□□ -0.54
PCYT1A-215	ENST00000488235	NUCKS1	Q9H1E3	243 aa	Known RBP	11.68	□□□□□ -0.54
PCYT1A-215	ENST00000488235	UBE2T	Q9NPD8	197 aa	Predicted RBP	11.68	□□□□□ -0.54
PCYT1A-215	ENST00000488235	STIM2	Q9P246	746 aa		11.68	□□□□□ -0.54
PCYT1A-215	ENST00000488235	GGA2	Q9UJY4	613 aa		11.68	□□□□□ -0.54
PCYT1A-215	ENST00000488235	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	11.68	□□□□□ -0.54
PCYT1A-215	ENST00000488235	SMG1	Q96Q15	3661 aa	Known RBP	11.68	□□□□□ -0.54
PCYT1A-215	ENST00000488235	BICDL2	A1A5D9	508 aa		11.67	□□□□□ -0.54
PCYT1A-215	ENST00000488235	ARHGAP33	O14559	1287 aa		11.67	□□□□□ -0.54
PCYT1A-215	ENST00000488235	NPC1	O15118	1278 aa		11.67	□□□□□ -0.54
PCYT1A-215	ENST00000488235	ZBTB24	O43167	697 aa	Predicted RBP	11.67	□□□□□ -0.54
PCYT1A-215	ENST00000488235	ACSL4	O60488	711 aa		11.67	□□□□□ -0.54
PCYT1A-215	ENST00000488235	SYNCRIP	O60506	623 aa	Known RBP	11.67	□□□□□ -0.54
PCYT1A-215	ENST00000488235	TBL1X	O60907	577 aa		11.67	□□□□□ -0.54
PCYT1A-215	ENST00000488235	NDUFS2	O75306	463 aa		11.67	□□□□□ -0.54
PCYT1A-215	ENST00000488235	GJB3	O75712	270 aa		11.67	□□□□□ -0.54
PCYT1A-215	ENST00000488235	LATS1	O95835	1130 aa		11.67	□□□□□ -0.54
PCYT1A-215	ENST00000488235	IGLV3-19	P01714	112 aa		11.67	□□□□□ -0.54
PCYT1A-215	ENST00000488235	PABPC1	P11940	636 aa	Known RBP	11.67	□□□□□ -0.54
PCYT1A-215	ENST00000488235	KRT5	P13647	590 aa		11.67	□□□□□ -0.54
PCYT1A-215	ENST00000488235	PPP1R2	P41236	205 aa		11.67	□□□□□ -0.54
PCYT1A-215	ENST00000488235	NUMB	P49757	651 aa		11.67	□□□□□ -0.54
PCYT1A-215	ENST00000488235	TBX4	P57082	545 aa		11.67	□□□□□ -0.54
PCYT1A-215	ENST00000488235	RPS24	P62847	133 aa	Known RBP	11.67	□□□□□ -0.54
PCYT1A-215	ENST00000488235	BNC1	Q01954	994 aa		11.67	□□□□□ -0.54
PCYT1A-215	ENST00000488235	GRIK2	Q13002	908 aa		11.67	□□□□□ -0.54
PCYT1A-215	ENST00000488235	CAMK2G	Q13555	558 aa	Predicted RBP	11.67	□□□□□ -0.54
PCYT1A-215	ENST00000488235	PLEKHG6	Q3KR16	790 aa		11.67	□□□□□ -0.54
PCYT1A-215	ENST00000488235	FSCB	Q5H9T9	825 aa		11.67	□□□□□ -0.54
PCYT1A-215	ENST00000488235	TAC4	Q86UU9	113 aa		11.67	□□□□□ -0.54
PCYT1A-215	ENST00000488235	CFAP52	Q8N1V2	620 aa		11.67	□□□□□ -0.54
PCYT1A-215	ENST00000488235	ZCCHC9	Q8N567	271 aa	Known RBP	11.67	□□□□□ -0.54
PCYT1A-215	ENST00000488235	C1orf216	Q8TAB5	229 aa		11.67	□□□□□ -0.54
PCYT1A-215	ENST00000488235	CEP76	Q8TAP6	659 aa		11.67	□□□□□ -0.54

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