RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 HESX1Q9UBX0 185 aa14.18□□□□□ -0.14
COPS7B-221ENST00000488111 ASIC3Q9UHC3 531 aa14.18□□□□□ -0.14
COPS7B-221ENST00000488111 DSEQ9UL01 958 aa14.18□□□□□ -0.14
COPS7B-221ENST00000488111 MRPL42Q9Y6G3 142 aaKnown RBP14.18□□□□□ -0.14
COPS7B-221ENST00000488111 RPS6KL1Q9Y6S9 549 aa14.18□□□□□ -0.14
COPS7B-221ENST00000488111 KRT36O76013 467 aa14.17□□□□□ -0.14
COPS7B-221ENST00000488111 PSMG1O95456 288 aa14.17□□□□□ -0.14
COPS7B-221ENST00000488111 MESDQ14696 234 aa14.17□□□□□ -0.14
COPS7B-221ENST00000488111 ACSBG2Q5FVE4 666 aa14.17□□□□□ -0.14
COPS7B-221ENST00000488111 SMYD5Q6GMV2 418 aa14.17□□□□□ -0.14
COPS7B-221ENST00000488111 PMF1Q6P1K2 205 aa14.17□□□□□ -0.14
COPS7B-221ENST00000488111 PAQR9Q6ZVX9 377 aa14.17□□□□□ -0.14
COPS7B-221ENST00000488111 LRRTM3Q86VH5 581 aa14.17□□□□□ -0.14
COPS7B-221ENST00000488111 RELL1Q8IUW5 271 aa14.17□□□□□ -0.14
COPS7B-221ENST00000488111 ZNF398Q8TD17 642 aa14.17□□□□□ -0.14
COPS7B-221ENST00000488111 PCED1BQ96HM7 432 aa14.17□□□□□ -0.14
COPS7B-221ENST00000488111 PAIP2Q9BPZ3 127 aaKnown RBP14.17□□□□□ -0.14
COPS7B-221ENST00000488111 CCDC77Q9BR77 488 aa14.17□□□□□ -0.14
COPS7B-221ENST00000488111 B3GNT5Q9BYG0 378 aa14.17□□□□□ -0.14
COPS7B-221ENST00000488111 RHOBTB2Q9BYZ6 727 aa14.17□□□□□ -0.14
COPS7B-221ENST00000488111 ZNF518BQ9C0D4 1074 aa14.17□□□□□ -0.14
COPS7B-221ENST00000488111 TMLHEQ9NVH6 421 aa14.17□□□□□ -0.14
COPS7B-221ENST00000488111 CDH9Q9ULB4 789 aa14.17□□□□□ -0.14
COPS7B-221ENST00000488111 FNDC1Q4ZHG4 1894 aaPredicted RBP14.17□□□□□ -0.14
COPS7B-221ENST00000488111 FSCN2O14926 492 aa14.17□□□□□ -0.14
COPS7B-221ENST00000488111 BEST1O76090 585 aa14.17□□□□□ -0.14
COPS7B-221ENST00000488111 PENKP01210 267 aaPredicted RBP14.17□□□□□ -0.14
COPS7B-221ENST00000488111 CYP1A2P05177 515 aa14.17□□□□□ -0.14
COPS7B-221ENST00000488111 TYMPP19971 482 aa14.17□□□□□ -0.14
COPS7B-221ENST00000488111 PAX3P23760 479 aa14.17□□□□□ -0.14
COPS7B-221ENST00000488111 PCSK1P29120 753 aa14.17□□□□□ -0.14
COPS7B-221ENST00000488111 NR1H3Q13133 447 aa14.17□□□□□ -0.14
COPS7B-221ENST00000488111 STILQ15468 1287 aa14.17□□□□□ -0.14
COPS7B-221ENST00000488111 PKDCCQ504Y2 493 aa14.17□□□□□ -0.14
COPS7B-221ENST00000488111 KCNT2Q6UVM3 1135 aa14.17□□□□□ -0.14
COPS7B-221ENST00000488111 NLRP9Q7RTR0 991 aa14.17□□□□□ -0.14
COPS7B-221ENST00000488111 TRIM74Q86UV6 250 aa14.17□□□□□ -0.14
COPS7B-221ENST00000488111 TRIM73Q86UV7 250 aa14.17□□□□□ -0.14
COPS7B-221ENST00000488111 TRABD2AQ86V40 505 aa14.17□□□□□ -0.14
COPS7B-221ENST00000488111 THEM5Q8N1Q8 247 aa14.17□□□□□ -0.14
COPS7B-221ENST00000488111 NDNQ99608 321 aa14.17□□□□□ -0.14
COPS7B-221ENST00000488111 ACBD6Q9BR61 282 aa14.17□□□□□ -0.14
COPS7B-221ENST00000488111 ZBED2Q9BTP6 218 aa14.17□□□□□ -0.14
COPS7B-221ENST00000488111 VCX3BQ9H321 246 aa14.17□□□□□ -0.14
COPS7B-221ENST00000488111 SYNCQ9H7C4 482 aa14.17□□□□□ -0.14
COPS7B-221ENST00000488111 VCX3AQ9NNX9 186 aa14.17□□□□□ -0.14
COPS7B-221ENST00000488111 DNAJC17Q9NVM6 304 aaKnown RBP14.17□□□□□ -0.14
COPS7B-221ENST00000488111 STX18Q9P2W9 335 aaKnown RBP14.17□□□□□ -0.14
COPS7B-221ENST00000488111 GRID1Q9ULK0 1009 aa14.17□□□□□ -0.14
COPS7B-221ENST00000488111 LTBP2Q14767 1821 aa14.17□□□□□ -0.14
COPS7B-221ENST00000488111 CAPN9O14815 690 aa14.16□□□□□ -0.14
COPS7B-221ENST00000488111 TBX10O75333 385 aa14.16□□□□□ -0.14
COPS7B-221ENST00000488111 ERBB2P04626 1255 aa14.16□□□□□ -0.14
COPS7B-221ENST00000488111 ABHD2P08910 425 aa14.16□□□□□ -0.14
COPS7B-221ENST00000488111 C1QBPQ07021 282 aaKnown RBP14.16□□□□□ -0.14
COPS7B-221ENST00000488111 TMED2Q15363 201 aa14.16□□□□□ -0.14
COPS7B-221ENST00000488111 CNPY1Q3B7I2 92 aa14.16□□□□□ -0.14
COPS7B-221ENST00000488111 VARS2Q5ST30 1063 aaKnown RBP14.16□□□□□ -0.14
COPS7B-221ENST00000488111 CLNKQ7Z7G1 428 aa14.16□□□□□ -0.14
COPS7B-221ENST00000488111 ANKRD52Q8NB46 1076 aa14.16□□□□□ -0.14
COPS7B-221ENST00000488111 ZNF564Q8TBZ8 553 aaPredicted RBP14.16□□□□□ -0.14
COPS7B-221ENST00000488111 LBHD1Q9BQE6 289 aaPredicted RBP14.16□□□□□ -0.14
COPS7B-221ENST00000488111 DNAI2Q9GZS0 605 aa14.16□□□□□ -0.14
COPS7B-221ENST00000488111 ATXN10Q9UBB4 475 aa14.16□□□□□ -0.14
COPS7B-221ENST00000488111 ZNF212Q9UDV6 495 aa14.16□□□□□ -0.14
COPS7B-221ENST00000488111 SF3B1O75533 1304 aaKnown RBP eCLIP14.16□□□□□ -0.142e-6■■■■■ 47.9
COPS7B-221ENST00000488111 COL4A6Q14031 1691 aa14.16□□□□□ -0.14
COPS7B-221ENST00000488111 ARHGEF37A1IGU5 675 aa14.16□□□□□ -0.14
COPS7B-221ENST00000488111 GOLGA8SH3BPF8 625 aa14.16□□□□□ -0.14
COPS7B-221ENST00000488111 CCDC22O60826 627 aa14.16□□□□□ -0.14
COPS7B-221ENST00000488111 ZWINTO95229 277 aa14.16□□□□□ -0.14
COPS7B-221ENST00000488111 GJB5O95377 273 aa14.16□□□□□ -0.14
COPS7B-221ENST00000488111 IMPDH2P12268 514 aa14.16□□□□□ -0.14
COPS7B-221ENST00000488111 INTS6LQ5JSJ4 861 aaKnown RBP14.16□□□□□ -0.14
COPS7B-221ENST00000488111 RTP2Q5QGT7 225 aa14.16□□□□□ -0.14
COPS7B-221ENST00000488111 LIN9Q5TKA1 542 aa14.16□□□□□ -0.14
COPS7B-221ENST00000488111 PSRC1Q6PGN9 363 aaPredicted RBP14.16□□□□□ -0.14
COPS7B-221ENST00000488111 RBM12BQ8IXT5 1001 aaKnown RBP14.16□□□□□ -0.14
COPS7B-221ENST00000488111 PPFIBP2Q8ND30 876 aa14.16□□□□□ -0.14
COPS7B-221ENST00000488111 SLC35F5Q8WV83 523 aa14.16□□□□□ -0.14
COPS7B-221ENST00000488111 C1orf54Q8WWF1 131 aa14.16□□□□□ -0.14
COPS7B-221ENST00000488111 MYLPFQ96A32 169 aa14.16□□□□□ -0.14
COPS7B-221ENST00000488111 PTCD3Q96EY7 689 aaKnown RBP14.16□□□□□ -0.14
COPS7B-221ENST00000488111 ZNF184Q99676 751 aaPredicted RBP14.16□□□□□ -0.14
COPS7B-221ENST00000488111 HNRNPABQ99729 332 aaKnown RBP14.16□□□□□ -0.14
COPS7B-221ENST00000488111 BTBD10Q9BSF8 475 aa14.16□□□□□ -0.14
COPS7B-221ENST00000488111 E5RJQ4 531 aa14.15□□□□□ -0.14
COPS7B-221ENST00000488111 GSC2O15499 205 aa14.15□□□□□ -0.14
COPS7B-221ENST00000488111 MAP3K7O43318 606 aa14.15□□□□□ -0.14
COPS7B-221ENST00000488111 SPAG7O75391 227 aa14.15□□□□□ -0.14
COPS7B-221ENST00000488111 MAN1A1P33908 653 aa14.15□□□□□ -0.14
COPS7B-221ENST00000488111 OTOAQ7RTW8 1153 aa14.15□□□□□ -0.14
COPS7B-221ENST00000488111 CPNE8Q86YQ8 564 aa14.15□□□□□ -0.14
COPS7B-221ENST00000488111 KBTBD2Q8IY47 623 aa14.15□□□□□ -0.14
COPS7B-221ENST00000488111 CMTR2Q8IYT2 770 aaKnown RBP14.15□□□□□ -0.14
COPS7B-221ENST00000488111 TRIM11Q96F44 468 aa14.15□□□□□ -0.14
COPS7B-221ENST00000488111 IGSF21Q96ID5 467 aa14.15□□□□□ -0.14
COPS7B-221ENST00000488111 VCPIP1Q96JH7 1222 aa14.15□□□□□ -0.14
COPS7B-221ENST00000488111 TUBB6Q9BUF5 446 aa14.15□□□□□ -0.14
COPS7B-221ENST00000488111 SPATA16Q9BXB7 569 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms