RNA–Protein interactions for RNA: ENST00000488106.1

RHBDD3-205, Transcript of rhomboid domain containing 3, humanhuman

TSL 5

Gene RHBDD3, Length 640 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-205ENST00000488106 GFRA2O00451 464 aa24.57■■□□□ 1.52
RHBDD3-205ENST00000488106 TBL1XO60907 577 aa24.57■■□□□ 1.52
RHBDD3-205ENST00000488106 ADAM23O75077 832 aa24.57■■□□□ 1.52
RHBDD3-205ENST00000488106 CYP1A1P04798 512 aaPredicted RBP24.57■■□□□ 1.52
RHBDD3-205ENST00000488106 HNRNPLP14866 589 aaKnown RBP eCLIP24.57■■□□□ 1.52
RHBDD3-205ENST00000488106 GBP1P32455 592 aa24.57■■□□□ 1.52
RHBDD3-205ENST00000488106 FANCCQ00597 558 aa24.57■■□□□ 1.52
RHBDD3-205ENST00000488106 CRY1Q16526 586 aa24.57■■□□□ 1.52
RHBDD3-205ENST00000488106 LPAL2Q16609 132 aa24.57■■□□□ 1.52
RHBDD3-205ENST00000488106 ANO7Q6IWH7 933 aa24.57■■□□□ 1.52
RHBDD3-205ENST00000488106 TRIM72Q6ZMU5 477 aa24.57■■□□□ 1.52
RHBDD3-205ENST00000488106 TRMT11Q7Z4G4 463 aaKnown RBP24.57■■□□□ 1.52
RHBDD3-205ENST00000488106 SUMF1Q8NBK3 374 aa24.57■■□□□ 1.52
RHBDD3-205ENST00000488106 DDX50Q9BQ39 737 aaKnown RBP24.57■■□□□ 1.52
RHBDD3-205ENST00000488106 C11orf70Q9BRQ4 267 aa24.57■■□□□ 1.52
RHBDD3-205ENST00000488106 STIM2Q9P246 746 aa24.57■■□□□ 1.52
RHBDD3-205ENST00000488106 A0A1W2PQC6 194 aa24.56■■□□□ 1.52
RHBDD3-205ENST00000488106 M0QYT0 321 aa24.56■■□□□ 1.52
RHBDD3-205ENST00000488106 AXIN1O15169 862 aa24.56■■□□□ 1.52
RHBDD3-205ENST00000488106 HRO43593 1189 aa24.56■■□□□ 1.52
RHBDD3-205ENST00000488106 FERP16591 822 aa24.56■■□□□ 1.52
RHBDD3-205ENST00000488106 NOS2P35228 1153 aa24.56■■□□□ 1.52
RHBDD3-205ENST00000488106 MATKP42679 507 aa24.56■■□□□ 1.52
RHBDD3-205ENST00000488106 SULT1E1P49888 294 aa24.56■■□□□ 1.52
RHBDD3-205ENST00000488106 PIK3R6Q5UE93 754 aa24.56■■□□□ 1.52
RHBDD3-205ENST00000488106 RAP1GAP2Q684P5 730 aa24.56■■□□□ 1.52
RHBDD3-205ENST00000488106 PHLDB2Q86SQ0 1253 aa24.56■■□□□ 1.52
RHBDD3-205ENST00000488106 CHSY1Q86X52 802 aa24.56■■□□□ 1.52
RHBDD3-205ENST00000488106 CHPFQ8IZ52 775 aa24.56■■□□□ 1.52
RHBDD3-205ENST00000488106 HJURPQ8NCD3 748 aaPredicted RBP24.56■■□□□ 1.52
RHBDD3-205ENST00000488106 BAP1Q92560 729 aa24.56■■□□□ 1.52
RHBDD3-205ENST00000488106 ERLEC1Q96DZ1 483 aa24.56■■□□□ 1.52
RHBDD3-205ENST00000488106 MYEOVQ96EZ4 313 aa24.56■■□□□ 1.52
RHBDD3-205ENST00000488106 BTN2A3PQ96KV6 586 aa24.56■■□□□ 1.52
RHBDD3-205ENST00000488106 PCDHB18PQ96TA0 734 aa24.56■■□□□ 1.52
RHBDD3-205ENST00000488106 ACOX2Q99424 681 aa24.56■■□□□ 1.52
RHBDD3-205ENST00000488106 HINFPQ9BQA5 517 aa24.56■■□□□ 1.52
RHBDD3-205ENST00000488106 SLC2A11Q9BYW1 496 aa24.56■■□□□ 1.52
RHBDD3-205ENST00000488106 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP24.56■■□□□ 1.52
RHBDD3-205ENST00000488106 STARD13Q9Y3M8 1113 aa24.56■■□□□ 1.52
RHBDD3-205ENST00000488106 TYW5A2RUC4 315 aaKnown RBP24.55■■□□□ 1.52
RHBDD3-205ENST00000488106 LRRC53A6NM62 1247 aa24.55■■□□□ 1.52
RHBDD3-205ENST00000488106 HOXB2P14652 356 aa24.55■■□□□ 1.52
RHBDD3-205ENST00000488106 SCNN1AP37088 669 aa24.55■■□□□ 1.52
RHBDD3-205ENST00000488106 DGKEP52429 567 aa24.55■■□□□ 1.52
RHBDD3-205ENST00000488106 SIM2Q14190 667 aaPredicted RBP24.55■■□□□ 1.52
RHBDD3-205ENST00000488106 OTUD1Q5VV17 481 aaPredicted RBP24.55■■□□□ 1.52
RHBDD3-205ENST00000488106 CEP68Q76N32 757 aa24.55■■□□□ 1.52
RHBDD3-205ENST00000488106 ATP6V0D2Q8N8Y2 350 aa24.55■■□□□ 1.52
RHBDD3-205ENST00000488106 WFDC5Q8TCV5 224 aa24.55■■□□□ 1.52
RHBDD3-205ENST00000488106 KCNV2Q8TDN2 545 aa24.55■■□□□ 1.52
RHBDD3-205ENST00000488106 TPSD1Q9BZJ3 242 aa24.55■■□□□ 1.52
RHBDD3-205ENST00000488106 METTL5Q9NRN9 209 aaKnown RBP24.55■■□□□ 1.52
RHBDD3-205ENST00000488106 SLTMQ9NWH9 1034 aaKnown RBP eCLIP24.55■■□□□ 1.52
RHBDD3-205ENST00000488106 STAP1Q9ULZ2 295 aa24.55■■□□□ 1.52
RHBDD3-205ENST00000488106 TNRC6BQ9UPQ9 1833 aaKnown RBP24.55■■□□□ 1.52
RHBDD3-205ENST00000488106 TCRBV21S2A2A0A5A6 115 aa24.54■■□□□ 1.52
RHBDD3-205ENST00000488106 TFE3P19532 575 aaPredicted RBP24.54■■□□□ 1.52
RHBDD3-205ENST00000488106 ABCB4P21439 1286 aa24.54■■□□□ 1.52
RHBDD3-205ENST00000488106 MMP8P22894 467 aa24.54■■□□□ 1.52
RHBDD3-205ENST00000488106 NTSR1P30989 418 aa24.54■■□□□ 1.52
RHBDD3-205ENST00000488106 CCR1P32246 355 aa24.54■■□□□ 1.52
RHBDD3-205ENST00000488106 FLT3P36888 993 aa24.54■■□□□ 1.52
RHBDD3-205ENST00000488106 NSFP46459 744 aaKnown RBP24.54■■□□□ 1.52
RHBDD3-205ENST00000488106 RPS24P62847 133 aaKnown RBP24.54■■□□□ 1.52
RHBDD3-205ENST00000488106 EIF4EBP2Q13542 120 aaPredicted RBP24.54■■□□□ 1.52
RHBDD3-205ENST00000488106 NR1I3Q14994 352 aa24.54■■□□□ 1.52
RHBDD3-205ENST00000488106 NFKBIBQ15653 356 aa24.54■■□□□ 1.52
RHBDD3-205ENST00000488106 CLEC16AQ2KHT3 1053 aa24.54■■□□□ 1.52
RHBDD3-205ENST00000488106 MS4A13Q5J8X5 152 aa24.54■■□□□ 1.52
RHBDD3-205ENST00000488106 LGI2Q8N0V4 545 aa24.54■■□□□ 1.52
RHBDD3-205ENST00000488106 CFAP52Q8N1V2 620 aa24.54■■□□□ 1.52
RHBDD3-205ENST00000488106 AGPAT1Q99943 283 aa24.54■■□□□ 1.52
RHBDD3-205ENST00000488106 ADAM33Q9BZ11 813 aa24.54■■□□□ 1.52
RHBDD3-205ENST00000488106 CIPCQ9C0C6 399 aa24.54■■□□□ 1.52
RHBDD3-205ENST00000488106 POLMQ9NP87 494 aaPredicted RBP24.54■■□□□ 1.52
RHBDD3-205ENST00000488106 ABCB8Q9NUT2 735 aa24.54■■□□□ 1.52
RHBDD3-205ENST00000488106 CACNA2D2Q9NY47 1150 aa24.54■■□□□ 1.52
RHBDD3-205ENST00000488106 CALCOCO1Q9P1Z2 691 aa24.54■■□□□ 1.52
RHBDD3-205ENST00000488106 BCCIPQ9P287 314 aaKnown RBP eCLIP24.54■■□□□ 1.52
RHBDD3-205ENST00000488106 RAB23Q9ULC3 237 aa24.54■■□□□ 1.52
RHBDD3-205ENST00000488106 SPTBN4Q9H254 2564 aa24.53■■□□□ 1.52
RHBDD3-205ENST00000488106 DMXL1Q9Y485 3027 aa24.53■■□□□ 1.52
RHBDD3-205ENST00000488106 CCDC163A0A0D9SF12 145 aa24.53■■□□□ 1.52
RHBDD3-205ENST00000488106 KCNU1A8MYU2 1149 aa24.53■■□□□ 1.52
RHBDD3-205ENST00000488106 RPP40O75818 363 aaKnown RBP24.53■■□□□ 1.52
RHBDD3-205ENST00000488106 CCDC172P0C7W6 258 aa24.53■■□□□ 1.52
RHBDD3-205ENST00000488106 SLC2A3P11169 496 aa24.53■■□□□ 1.52
RHBDD3-205ENST00000488106 UNGP13051 313 aaPredicted RBP24.53■■□□□ 1.52
RHBDD3-205ENST00000488106 TACR2P21452 398 aa24.53■■□□□ 1.52
RHBDD3-205ENST00000488106 HLA-FP30511 346 aa24.53■■□□□ 1.52
RHBDD3-205ENST00000488106 CNR2P34972 360 aa24.53■■□□□ 1.52
RHBDD3-205ENST00000488106 UBASH3AP57075 661 aa24.53■■□□□ 1.52
RHBDD3-205ENST00000488106 CENPCQ03188 943 aa24.53■■□□□ 1.52
RHBDD3-205ENST00000488106 SDE2Q6IQ49 451 aa24.53■■□□□ 1.52
RHBDD3-205ENST00000488106 MFN1Q8IWA4 741 aa24.53■■□□□ 1.52
RHBDD3-205ENST00000488106 MDGA1Q8NFP4 955 aa24.53■■□□□ 1.52
RHBDD3-205ENST00000488106 HMGB4Q8WW32 186 aa24.53■■□□□ 1.52
RHBDD3-205ENST00000488106 GAB3Q8WWW8 586 aa24.53■■□□□ 1.52
RHBDD3-205ENST00000488106 NPY6RQ99463 290 aa24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms