RNA–Protein interactions for RNA: ENST00000487711.5

TTC3-220, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-220ENST00000487711 LAS2Q8IYD9 372 aa4.61□□□□□ -1.67
TTC3-220ENST00000487711 OR4N4Q8N0Y3 316 aa4.61□□□□□ -1.67
TTC3-220ENST00000487711 SRFBP1Q8NEF9 429 aaKnown RBP4.61□□□□□ -1.67
TTC3-220ENST00000487711 HMGB4Q8WW32 186 aa4.61□□□□□ -1.67
TTC3-220ENST00000487711 RSC1A1Q92681 617 aa4.61□□□□□ -1.67
TTC3-220ENST00000487711 EID2BQ96D98 161 aa4.61□□□□□ -1.67
TTC3-220ENST00000487711 ZNF845Q96IR2 970 aaPredicted RBP4.61□□□□□ -1.67
TTC3-220ENST00000487711 RTKNQ9BST9 563 aa4.61□□□□□ -1.67
TTC3-220ENST00000487711 BRD8Q9H0E9 1235 aa4.61□□□□□ -1.67
TTC3-220ENST00000487711 AGO4Q9HCK5 861 aaKnown RBP4.61□□□□□ -1.67
TTC3-220ENST00000487711 HERC5Q9UII4 1024 aaKnown RBP4.61□□□□□ -1.67
TTC3-220ENST00000487711 RAB21Q9UL25 225 aa4.61□□□□□ -1.67
TTC3-220ENST00000487711 B3GNT3Q9Y2A9 372 aa4.61□□□□□ -1.67
TTC3-220ENST00000487711 BTBD3Q9Y2F9 522 aa4.61□□□□□ -1.67
TTC3-220ENST00000487711 E5RJQ4 531 aa4.6□□□□□ -1.67
TTC3-220ENST00000487711 NKX2-8O15522 239 aa4.6□□□□□ -1.67
TTC3-220ENST00000487711 ACTL6BO94805 426 aa4.6□□□□□ -1.67
TTC3-220ENST00000487711 ENO1P06733 434 aaKnown RBP4.6□□□□□ -1.67
TTC3-220ENST00000487711 PEPDP12955 493 aa4.6□□□□□ -1.67
TTC3-220ENST00000487711 ST6GAL1P15907 406 aa4.6□□□□□ -1.67
TTC3-220ENST00000487711 GRK5P34947 590 aa4.6□□□□□ -1.67
TTC3-220ENST00000487711 CPA2P48052 419 aa4.6□□□□□ -1.67
TTC3-220ENST00000487711 ZNF84P51523 738 aa4.6□□□□□ -1.67
TTC3-220ENST00000487711 SSBP2P81877 361 aaPredicted RBP4.6□□□□□ -1.67
TTC3-220ENST00000487711 STIM1Q13586 685 aa4.6□□□□□ -1.67
TTC3-220ENST00000487711 KLF9Q13886 244 aaPredicted RBP4.6□□□□□ -1.67
TTC3-220ENST00000487711 TRIP6Q15654 476 aaKnown RBP4.6□□□□□ -1.67
TTC3-220ENST00000487711 ETFDHQ16134 617 aa4.6□□□□□ -1.67
TTC3-220ENST00000487711 SLC9C1Q4G0N8 1177 aa4.6□□□□□ -1.67
TTC3-220ENST00000487711 Q4G0T1 1027 aa4.6□□□□□ -1.67
TTC3-220ENST00000487711 CCDC174Q6PII3 467 aa4.6□□□□□ -1.67
TTC3-220ENST00000487711 DHRS13Q6UX07 377 aa4.6□□□□□ -1.67
TTC3-220ENST00000487711 CCDC117Q8IWD4 279 aaPredicted RBP4.6□□□□□ -1.67
TTC3-220ENST00000487711 OR1N1Q8NGS0 311 aa4.6□□□□□ -1.67
TTC3-220ENST00000487711 DENND1AQ8TEH3 1009 aa4.6□□□□□ -1.67
TTC3-220ENST00000487711 RPL36ALQ969Q0 106 aaKnown RBP4.6□□□□□ -1.67
TTC3-220ENST00000487711 TRMT61AQ96FX7 289 aaKnown RBP4.6□□□□□ -1.67
TTC3-220ENST00000487711 GPR78Q96P69 363 aa4.6□□□□□ -1.67
TTC3-220ENST00000487711 SIGLEC11Q96RL6 698 aa4.6□□□□□ -1.67
TTC3-220ENST00000487711 MECRQ9BV79 373 aa4.6□□□□□ -1.67
TTC3-220ENST00000487711 ZNF70Q9UC06 446 aaPredicted RBP4.6□□□□□ -1.67
TTC3-220ENST00000487711 TRPC5Q9UL62 973 aaPredicted RBP4.6□□□□□ -1.67
TTC3-220ENST00000487711 SLC12A4Q9UP95 1085 aa4.6□□□□□ -1.67
TTC3-220ENST00000487711 CNTN6Q9UQ52 1028 aa4.6□□□□□ -1.67
TTC3-220ENST00000487711 ZBTB1Q9Y2K1 713 aa4.6□□□□□ -1.67
TTC3-220ENST00000487711 TBC1D3DA0A087WVF3 549 aa4.59□□□□□ -1.67
TTC3-220ENST00000487711 TBC1D3IA0A087WXS9 549 aa4.59□□□□□ -1.67
TTC3-220ENST00000487711 TBC1D3EA0A087X179 549 aa4.59□□□□□ -1.67
TTC3-220ENST00000487711 TBC1D3KA0A087X1G2 549 aa4.59□□□□□ -1.67
TTC3-220ENST00000487711 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.59□□□□□ -1.67
TTC3-220ENST00000487711 SLC22A23A1A5C7 686 aa4.59□□□□□ -1.67
TTC3-220ENST00000487711 TBC1D3BA6NDS4 549 aa4.59□□□□□ -1.67
TTC3-220ENST00000487711 TBC1D3FA6NER0 549 aaPredicted RBP4.59□□□□□ -1.67
TTC3-220ENST00000487711 TBC1D3LB9A6J9 549 aa4.59□□□□□ -1.67
TTC3-220ENST00000487711 ADAM10O14672 748 aa4.59□□□□□ -1.67
TTC3-220ENST00000487711 LARGE1O95461 756 aa4.59□□□□□ -1.67
TTC3-220ENST00000487711 ALDOAP04075 364 aaKnown RBP4.59□□□□□ -1.67
TTC3-220ENST00000487711 TBC1D3HP0C7X1 549 aa4.59□□□□□ -1.67
TTC3-220ENST00000487711 AKR1A1P14550 325 aa4.59□□□□□ -1.67
TTC3-220ENST00000487711 RPS6KB1P23443 525 aa4.59□□□□□ -1.67
TTC3-220ENST00000487711 HOXA7P31268 230 aaPredicted RBP4.59□□□□□ -1.67
TTC3-220ENST00000487711 CHKAP35790 457 aa4.59□□□□□ -1.67
TTC3-220ENST00000487711 ZNF81P51508 661 aa4.59□□□□□ -1.67
TTC3-220ENST00000487711 SLC37A1P57057 533 aa4.59□□□□□ -1.67
TTC3-220ENST00000487711 TAS2R50P59544 299 aa4.59□□□□□ -1.67
TTC3-220ENST00000487711 RPL15P61313 204 aaKnown RBP4.59□□□□□ -1.67
TTC3-220ENST00000487711 RPS13P62277 151 aaKnown RBP4.59□□□□□ -1.67
TTC3-220ENST00000487711 AP2B1P63010 937 aa4.59□□□□□ -1.67
TTC3-220ENST00000487711 ID2Q02363 134 aa4.59□□□□□ -1.67
TTC3-220ENST00000487711 CFHR1Q03591 330 aa4.59□□□□□ -1.67
TTC3-220ENST00000487711 TLE3Q04726 772 aa4.59□□□□□ -1.67
TTC3-220ENST00000487711 DMWDQ09019 674 aa4.59□□□□□ -1.67
TTC3-220ENST00000487711 RPS6KA2Q15349 733 aa4.59□□□□□ -1.67
TTC3-220ENST00000487711 ANXA2RQ3ZCQ2 193 aa4.59□□□□□ -1.67
TTC3-220ENST00000487711 TBC1D3GQ6DHY5 549 aa4.59□□□□□ -1.67
TTC3-220ENST00000487711 SULT6B1Q6IMI4 303 aa4.59□□□□□ -1.67
TTC3-220ENST00000487711 TBC1D3CQ6IPX1 549 aa4.59□□□□□ -1.67
TTC3-220ENST00000487711 LIN54Q6MZP7 749 aa4.59□□□□□ -1.67
TTC3-220ENST00000487711 NFRKBQ6P4R8 1299 aa4.59□□□□□ -1.67
TTC3-220ENST00000487711 SLC39A5Q6ZMH5 540 aa4.59□□□□□ -1.67
TTC3-220ENST00000487711 RAB11FIP2Q7L804 512 aa4.59□□□□□ -1.67
TTC3-220ENST00000487711 RFX6Q8HWS3 928 aa4.59□□□□□ -1.67
TTC3-220ENST00000487711 TBC1D3Q8IZP1 549 aaPredicted RBP4.59□□□□□ -1.67
TTC3-220ENST00000487711 CACNA2D3Q8IZS8 1091 aa4.59□□□□□ -1.67
TTC3-220ENST00000487711 ADPRHL1Q8NDY3 354 aa4.59□□□□□ -1.67
TTC3-220ENST00000487711 KAT2BQ92831 832 aa4.59□□□□□ -1.67
TTC3-220ENST00000487711 P2RY11Q96G91 374 aa4.59□□□□□ -1.67
TTC3-220ENST00000487711 ABHD14AQ9BUJ0 271 aa4.59□□□□□ -1.67
TTC3-220ENST00000487711 SCNM1Q9BWG6 230 aa4.59□□□□□ -1.67
TTC3-220ENST00000487711 ELAC1Q9H777 363 aaKnown RBP4.59□□□□□ -1.67
TTC3-220ENST00000487711 LIN7CQ9NUP9 197 aaKnown RBP4.59□□□□□ -1.67
TTC3-220ENST00000487711 TRNAU1APQ9NX07 287 aaKnown RBP4.59□□□□□ -1.67
TTC3-220ENST00000487711 TUBA8Q9NY65 449 aaPredicted RBP4.59□□□□□ -1.67
TTC3-220ENST00000487711 RNF7Q9UBF6 113 aa4.59□□□□□ -1.67
TTC3-220ENST00000487711 DAPP1Q9UN19 280 aa4.59□□□□□ -1.67
TTC3-220ENST00000487711 SPATA31A5Q5VU36 1347 aa4.58□□□□□ -1.68
TTC3-220ENST00000487711 EMSYQ7Z589 1322 aa4.58□□□□□ -1.68
TTC3-220ENST00000487711 SPATA31A7Q8IWB4 1347 aa4.58□□□□□ -1.68
TTC3-220ENST00000487711 FAM90A18PA6NE21 464 aa4.58□□□□□ -1.68
TTC3-220ENST00000487711 FAM90A16PA6NEW6 464 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms