RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 RFWD3Q6PCD5 774 aa12.71□□□□□ -0.37
VPS16-208ENST00000487461 SERPINA13PQ6UXR4 307 aa12.71□□□□□ -0.37
VPS16-208ENST00000487461 UNQ6494/PRO21346Q6UXR6 183 aa12.71□□□□□ -0.37
VPS16-208ENST00000487461 CHST9Q7L1S5 443 aa12.71□□□□□ -0.37
VPS16-208ENST00000487461 KIAA0907Q7Z7F0 614 aaPredicted RBP12.71□□□□□ -0.37
VPS16-208ENST00000487461 ARHGEF19Q8IW93 802 aa12.71□□□□□ -0.37
VPS16-208ENST00000487461 CADM4Q8NFZ8 388 aa12.71□□□□□ -0.37
VPS16-208ENST00000487461 CLEC4CQ8WTT0 213 aa12.71□□□□□ -0.37
VPS16-208ENST00000487461 NELFBQ8WX92 580 aa12.71□□□□□ -0.37
VPS16-208ENST00000487461 IRGQQ8WZA9 623 aa12.71□□□□□ -0.37
VPS16-208ENST00000487461 CAMK1GQ96NX5 476 aa12.71□□□□□ -0.37
VPS16-208ENST00000487461 NUP58Q9BVL2 599 aa12.71□□□□□ -0.37
VPS16-208ENST00000487461 ADAM33Q9BZ11 813 aa12.71□□□□□ -0.37
VPS16-208ENST00000487461 TMEM245Q9H330 911 aa12.71□□□□□ -0.37
VPS16-208ENST00000487461 ABCB8Q9NUT2 735 aa12.71□□□□□ -0.37
VPS16-208ENST00000487461 SUSD2Q9UGT4 822 aa12.71□□□□□ -0.37
VPS16-208ENST00000487461 PLA2G4CQ9UP65 541 aa12.71□□□□□ -0.37
VPS16-208ENST00000487461 MEI4A8MW99 385 aa12.7□□□□□ -0.38
VPS16-208ENST00000487461 M0QYV0 167 aa12.7□□□□□ -0.38
VPS16-208ENST00000487461 P4HA2O15460 535 aa12.7□□□□□ -0.38
VPS16-208ENST00000487461 HYAL3O43820 417 aaPredicted RBP12.7□□□□□ -0.38
VPS16-208ENST00000487461 SH3BP5O60239 455 aa12.7□□□□□ -0.38
VPS16-208ENST00000487461 FYNP06241 537 aa12.7□□□□□ -0.38
VPS16-208ENST00000487461 ACADMP11310 421 aa12.7□□□□□ -0.38
VPS16-208ENST00000487461 SLC6A4P31645 630 aa12.7□□□□□ -0.38
VPS16-208ENST00000487461 ZNF445P59923 1031 aa12.7□□□□□ -0.38
VPS16-208ENST00000487461 KCNH2Q12809 1159 aa12.7□□□□□ -0.38
VPS16-208ENST00000487461 CAMK2GQ13555 558 aaPredicted RBP12.7□□□□□ -0.38
VPS16-208ENST00000487461 MORC3Q14149 939 aa12.7□□□□□ -0.38
VPS16-208ENST00000487461 BECN1Q14457 450 aa12.7□□□□□ -0.38
VPS16-208ENST00000487461 PTPRNQ16849 979 aa12.7□□□□□ -0.38
VPS16-208ENST00000487461 FAM133BQ5BKY9 247 aaKnown RBP12.7□□□□□ -0.38
VPS16-208ENST00000487461 PIK3R6Q5UE93 754 aa12.7□□□□□ -0.38
VPS16-208ENST00000487461 DCAF12L1Q5VU92 463 aa12.7□□□□□ -0.38
VPS16-208ENST00000487461 FAM124AQ86V42 546 aa12.7□□□□□ -0.38
VPS16-208ENST00000487461 CACUL1Q86Y37 369 aa12.7□□□□□ -0.38
VPS16-208ENST00000487461 UNC45BQ8IWX7 931 aa12.7□□□□□ -0.38
VPS16-208ENST00000487461 SCUBE3Q8IX30 993 aa12.7□□□□□ -0.38
VPS16-208ENST00000487461 ZNF366Q8N895 744 aa12.7□□□□□ -0.38
VPS16-208ENST00000487461 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.7□□□□□ -0.38
VPS16-208ENST00000487461 KDF1Q8NAX2 398 aaPredicted RBP12.7□□□□□ -0.38
VPS16-208ENST00000487461 OR2T3Q8NH03 318 aa12.7□□□□□ -0.38
VPS16-208ENST00000487461 WFDC5Q8TCV5 224 aa12.7□□□□□ -0.38
VPS16-208ENST00000487461 WFIKKN2Q8TEU8 576 aa12.7□□□□□ -0.38
VPS16-208ENST00000487461 MYEOVQ96EZ4 313 aa12.7□□□□□ -0.38
VPS16-208ENST00000487461 LMLNQ96KR4 655 aa12.7□□□□□ -0.38
VPS16-208ENST00000487461 HSFY1Q96LI6 401 aa12.7□□□□□ -0.38
VPS16-208ENST00000487461 KREMEN1Q96MU8 473 aa12.7□□□□□ -0.38
VPS16-208ENST00000487461 MIR1-1HGQ9H1L0 117 aa12.7□□□□□ -0.38
VPS16-208ENST00000487461 GGA2Q9UJY4 613 aa12.7□□□□□ -0.38
VPS16-208ENST00000487461 NFE2L3Q9Y4A8 694 aa12.7□□□□□ -0.38
VPS16-208ENST00000487461 CFAP47Q6ZTR5 3102 aa12.69□□□□□ -0.38
VPS16-208ENST00000487461 A0A1B0GTW7 788 aa12.69□□□□□ -0.38
VPS16-208ENST00000487461 BIN1O00499 593 aa12.69□□□□□ -0.38
VPS16-208ENST00000487461 ACSL4O60488 711 aa12.69□□□□□ -0.38
VPS16-208ENST00000487461 TBL1XO60907 577 aa12.69□□□□□ -0.38
VPS16-208ENST00000487461 GADD45BO75293 160 aaPredicted RBP12.69□□□□□ -0.38
VPS16-208ENST00000487461 LTFP02788 710 aa12.69□□□□□ -0.38
VPS16-208ENST00000487461 C7P10643 843 aa12.69□□□□□ -0.38
VPS16-208ENST00000487461 PABPC1P11940 636 aaKnown RBP12.69□□□□□ -0.38
VPS16-208ENST00000487461 CD70P32970 193 aa12.69□□□□□ -0.38
VPS16-208ENST00000487461 PPP1R2P41236 205 aa12.69□□□□□ -0.38
VPS16-208ENST00000487461 RPL34P49207 117 aaKnown RBP12.69□□□□□ -0.38
VPS16-208ENST00000487461 STX17P56962 302 aa12.69□□□□□ -0.38
VPS16-208ENST00000487461 TBX4P57082 545 aa12.69□□□□□ -0.38
VPS16-208ENST00000487461 BNC1Q01954 994 aa12.69□□□□□ -0.38
VPS16-208ENST00000487461 CETN1Q12798 172 aa12.69□□□□□ -0.38
VPS16-208ENST00000487461 GRIK2Q13002 908 aa12.69□□□□□ -0.38
VPS16-208ENST00000487461 SLC14A1Q13336 389 aa12.69□□□□□ -0.38
VPS16-208ENST00000487461 STILQ15468 1287 aa12.69□□□□□ -0.38
VPS16-208ENST00000487461 FNDC3BQ53EP0 1204 aaKnown RBP12.69□□□□□ -0.38
VPS16-208ENST00000487461 MPP7Q5T2T1 576 aa12.69□□□□□ -0.38
VPS16-208ENST00000487461 MBLAC2Q68D91 279 aa12.69□□□□□ -0.38
VPS16-208ENST00000487461 NADSYN1Q6IA69 706 aa12.69□□□□□ -0.38
VPS16-208ENST00000487461 FOXR2Q6PJQ5 311 aa12.69□□□□□ -0.38
VPS16-208ENST00000487461 TRIM59Q8IWR1 403 aa12.69□□□□□ -0.38
VPS16-208ENST00000487461 ZCCHC9Q8N567 271 aaKnown RBP12.69□□□□□ -0.38
VPS16-208ENST00000487461 C1orf216Q8TAB5 229 aa12.69□□□□□ -0.38
VPS16-208ENST00000487461 GATA6Q92908 595 aa12.69□□□□□ -0.38
VPS16-208ENST00000487461 AZIN2Q96A70 460 aa12.69□□□□□ -0.38
VPS16-208ENST00000487461 MIS12Q9H081 205 aa12.69□□□□□ -0.38
VPS16-208ENST00000487461 PRSS16Q9NQE7 514 aa12.69□□□□□ -0.38
VPS16-208ENST00000487461 STIM2Q9P246 746 aa12.69□□□□□ -0.38
VPS16-208ENST00000487461 ZMIZ1Q9ULJ6 1067 aa12.69□□□□□ -0.38
VPS16-208ENST00000487461 CNTN6Q9UQ52 1028 aa12.69□□□□□ -0.38
VPS16-208ENST00000487461 NAALADL1Q9UQQ1 740 aa12.69□□□□□ -0.38
VPS16-208ENST00000487461 FRYQ5TBA9 3013 aa12.68□□□□□ -0.38
VPS16-208ENST00000487461 BCAT2O15382 392 aaPredicted RBP12.68□□□□□ -0.38
VPS16-208ENST00000487461 FBXO21O94952 628 aa12.68□□□□□ -0.38
VPS16-208ENST00000487461 DLDP09622 509 aaKnown RBP12.68□□□□□ -0.38
VPS16-208ENST00000487461 ACSL1P33121 698 aa12.68□□□□□ -0.38
VPS16-208ENST00000487461 GPD2P43304 727 aa12.68□□□□□ -0.38
VPS16-208ENST00000487461 SLC11A2P49281 568 aa12.68□□□□□ -0.38
VPS16-208ENST00000487461 RPS14P62263 151 aaKnown RBP12.68□□□□□ -0.38
VPS16-208ENST00000487461 GCNT1Q02742 428 aa12.68□□□□□ -0.38
VPS16-208ENST00000487461 RING1Q06587 406 aa12.68□□□□□ -0.38
VPS16-208ENST00000487461 TRIP6Q15654 476 aaKnown RBP12.68□□□□□ -0.38
VPS16-208ENST00000487461 NUGGCQ68CJ6 796 aa12.68□□□□□ -0.38
VPS16-208ENST00000487461 DENND1BQ6P3S1 775 aa12.68□□□□□ -0.38
VPS16-208ENST00000487461 AHI1Q8N157 1196 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms