RNA–Protein interactions for RNA: ENST00000487305.5

TMEM39B-208, Transcript of transmembrane protein 39B, humanhuman

TSL 2

Gene TMEM39B, Length 2,087 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39B-208ENST00000487305 DHX35Q9H5Z1 703 aaKnown RBP12.76□□□□□ -0.37
TMEM39B-208ENST00000487305 S100A14Q9HCY8 104 aa12.76□□□□□ -0.37
TMEM39B-208ENST00000487305 NDUFA13Q9P0J0 144 aa12.76□□□□□ -0.37
TMEM39B-208ENST00000487305 IGSF9Q9P2J2 1179 aa12.76□□□□□ -0.37
TMEM39B-208ENST00000487305 GJA3Q9Y6H8 435 aa12.76□□□□□ -0.37
TMEM39B-208ENST00000487305 PTPRFP10586 1907 aa12.75□□□□□ -0.37
TMEM39B-208ENST00000487305 KPNA7A9QM74 516 aa12.75□□□□□ -0.37
TMEM39B-208ENST00000487305 PRR5-ARHGAP8B1AHC4 643 aa12.75□□□□□ -0.37
TMEM39B-208ENST00000487305 NCAM2O15394 837 aa12.75□□□□□ -0.37
TMEM39B-208ENST00000487305 USP2O75604 605 aaPredicted RBP12.75□□□□□ -0.37
TMEM39B-208ENST00000487305 MPOP05164 745 aa12.75□□□□□ -0.37
TMEM39B-208ENST00000487305 IQCF3P0C7M6 154 aa12.75□□□□□ -0.37
TMEM39B-208ENST00000487305 TXNP10599 105 aaKnown RBP12.75□□□□□ -0.37
TMEM39B-208ENST00000487305 FGF3P11487 239 aaPredicted RBP12.75□□□□□ -0.37
TMEM39B-208ENST00000487305 CYP2C9P11712 490 aa12.75□□□□□ -0.37
TMEM39B-208ENST00000487305 CDC25CP30307 473 aa12.75□□□□□ -0.37
TMEM39B-208ENST00000487305 GCLCP48506 637 aaPredicted RBP12.75□□□□□ -0.37
TMEM39B-208ENST00000487305 ZNF135P52742 658 aaPredicted RBP12.75□□□□□ -0.37
TMEM39B-208ENST00000487305 NRLP54845 237 aa12.75□□□□□ -0.37
TMEM39B-208ENST00000487305 ARHGAP8P85298 464 aa12.75□□□□□ -0.37
TMEM39B-208ENST00000487305 ORC1Q13415 861 aa12.75□□□□□ -0.37
TMEM39B-208ENST00000487305 TUBB3Q13509 450 aa12.75□□□□□ -0.37
TMEM39B-208ENST00000487305 PPP1R26Q5T8A7 1209 aaPredicted RBP12.75□□□□□ -0.37
TMEM39B-208ENST00000487305 N4BP2L1Q5TBK1 243 aaPredicted RBP12.75□□□□□ -0.37
TMEM39B-208ENST00000487305 PGM2L1Q6PCE3 622 aa12.75□□□□□ -0.37
TMEM39B-208ENST00000487305 TRMT10BQ6PF06 316 aaKnown RBP12.75□□□□□ -0.37
TMEM39B-208ENST00000487305 ACAD11Q709F0 780 aa12.75□□□□□ -0.37
TMEM39B-208ENST00000487305 TTC30AQ86WT1 665 aa12.75□□□□□ -0.37
TMEM39B-208ENST00000487305 TRIM50Q86XT4 487 aa12.75□□□□□ -0.37
TMEM39B-208ENST00000487305 CRYBG2Q8N1P7 616 aa12.75□□□□□ -0.37
TMEM39B-208ENST00000487305 BEST2Q8NFU1 509 aa12.75□□□□□ -0.37
TMEM39B-208ENST00000487305 DTX3LQ8TDB6 740 aa12.75□□□□□ -0.37
TMEM39B-208ENST00000487305 KIF12Q96FN5 646 aa12.75□□□□□ -0.37
TMEM39B-208ENST00000487305 KCNK16Q96T55 309 aa12.75□□□□□ -0.37
TMEM39B-208ENST00000487305 XPNPEP3Q9NQH7 507 aa12.75□□□□□ -0.37
TMEM39B-208ENST00000487305 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.75□□□□□ -0.37
TMEM39B-208ENST00000487305 DNAJC16Q9Y2G8 782 aa12.75□□□□□ -0.37
TMEM39B-208ENST00000487305 A0A087WZ62 844 aa12.74□□□□□ -0.37
TMEM39B-208ENST00000487305 A0A088AWK7 358 aa12.74□□□□□ -0.37
TMEM39B-208ENST00000487305 A0A0G2JLL6 359 aaPredicted RBP12.74□□□□□ -0.37
TMEM39B-208ENST00000487305 CITO14578 2027 aa12.74□□□□□ -0.37
TMEM39B-208ENST00000487305 GSRP00390 522 aa12.74□□□□□ -0.37
TMEM39B-208ENST00000487305 PROCP04070 461 aa12.74□□□□□ -0.37
TMEM39B-208ENST00000487305 ITGA2BP08514 1039 aa12.74□□□□□ -0.37
TMEM39B-208ENST00000487305 AMPD1P23109 780 aa12.74□□□□□ -0.37
TMEM39B-208ENST00000487305 SPRP35270 261 aaPredicted RBP12.74□□□□□ -0.37
TMEM39B-208ENST00000487305 PNPLA4P41247 253 aa12.74□□□□□ -0.37
TMEM39B-208ENST00000487305 MAGEA12P43365 314 aa12.74□□□□□ -0.37
TMEM39B-208ENST00000487305 SERPINB8P50452 374 aa12.74□□□□□ -0.37
TMEM39B-208ENST00000487305 GBE1Q04446 702 aa12.74□□□□□ -0.37
TMEM39B-208ENST00000487305 ASPHQ12797 758 aa12.74□□□□□ -0.37
TMEM39B-208ENST00000487305 DYNC1I2Q13409 638 aaKnown RBP12.74□□□□□ -0.37
TMEM39B-208ENST00000487305 TREML2Q5T2D2 321 aa12.74□□□□□ -0.37
TMEM39B-208ENST00000487305 NAIF1Q69YI7 327 aaPredicted RBP12.74□□□□□ -0.37
TMEM39B-208ENST00000487305 DPH6Q7L8W6 267 aa12.74□□□□□ -0.37
TMEM39B-208ENST00000487305 PRRT2Q7Z6L0 340 aaPredicted RBP12.74□□□□□ -0.37
TMEM39B-208ENST00000487305 DHDDSQ86SQ9 333 aa12.74□□□□□ -0.37
TMEM39B-208ENST00000487305 SETD3Q86TU7 594 aaPredicted RBP12.74□□□□□ -0.37
TMEM39B-208ENST00000487305 SHCBP1Q8NEM2 672 aa12.74□□□□□ -0.37
TMEM39B-208ENST00000487305 RDH11Q8TC12 318 aa12.74□□□□□ -0.37
TMEM39B-208ENST00000487305 EMID1Q96A84 441 aaPredicted RBP12.74□□□□□ -0.37
TMEM39B-208ENST00000487305 FDXACB1Q9BRP7 624 aaPredicted RBP12.74□□□□□ -0.37
TMEM39B-208ENST00000487305 CENPKQ9BS16 269 aa12.74□□□□□ -0.37
TMEM39B-208ENST00000487305 SLC24A3Q9HC58 644 aa12.74□□□□□ -0.37
TMEM39B-208ENST00000487305 NSMCE4AQ9NXX6 385 aa12.74□□□□□ -0.37
TMEM39B-208ENST00000487305 GGA3Q9NZ52 723 aa12.74□□□□□ -0.37
TMEM39B-208ENST00000487305 DTLQ9NZJ0 730 aa12.74□□□□□ -0.37
TMEM39B-208ENST00000487305 COPG2Q9UBF2 871 aa12.74□□□□□ -0.37
TMEM39B-208ENST00000487305 PLXNA1Q9UIW2 1896 aa12.74□□□□□ -0.37
TMEM39B-208ENST00000487305 DCAF8L1A6NGE4 600 aa12.74□□□□□ -0.37
TMEM39B-208ENST00000487305 CYB561D2O14569 222 aa12.74□□□□□ -0.37
TMEM39B-208ENST00000487305 XPOTO43592 962 aaKnown RBP12.74□□□□□ -0.37
TMEM39B-208ENST00000487305 SIN3BO75182 1162 aa12.74□□□□□ -0.37
TMEM39B-208ENST00000487305 GRAP2O75791 330 aa12.74□□□□□ -0.37
TMEM39B-208ENST00000487305 CD4P01730 458 aa12.74□□□□□ -0.37
TMEM39B-208ENST00000487305 ALDOAP04075 364 aaKnown RBP12.74□□□□□ -0.37
TMEM39B-208ENST00000487305 INSRRP14616 1297 aa12.74□□□□□ -0.37
TMEM39B-208ENST00000487305 MATKP42679 507 aa12.74□□□□□ -0.37
TMEM39B-208ENST00000487305 ABCE1P61221 599 aaKnown RBP12.74□□□□□ -0.37
TMEM39B-208ENST00000487305 PDE1CQ14123 709 aaPredicted RBP12.74□□□□□ -0.37
TMEM39B-208ENST00000487305 CA9Q16790 459 aa12.74□□□□□ -0.37
TMEM39B-208ENST00000487305 NCBP2-AS2Q69YL0 99 aa12.74□□□□□ -0.37
TMEM39B-208ENST00000487305 CASC4Q6P4E1 433 aa12.74□□□□□ -0.37
TMEM39B-208ENST00000487305 IZUMO2Q6UXV1 221 aa12.74□□□□□ -0.37
TMEM39B-208ENST00000487305 SCUBE3Q8IX30 993 aa12.74□□□□□ -0.37
TMEM39B-208ENST00000487305 ST13P4Q8IZP2 240 aaPredicted RBP12.74□□□□□ -0.37
TMEM39B-208ENST00000487305 OR6Y1Q8NGX8 325 aa12.74□□□□□ -0.37
TMEM39B-208ENST00000487305 GTF3C2Q8WUA4 911 aaPredicted RBP12.74□□□□□ -0.37
TMEM39B-208ENST00000487305 BTBD9Q96Q07 612 aa12.74□□□□□ -0.37
TMEM39B-208ENST00000487305 SLC9A7Q96T83 725 aa12.74□□□□□ -0.37
TMEM39B-208ENST00000487305 MMP19Q99542 508 aa12.74□□□□□ -0.37
TMEM39B-208ENST00000487305 LRRC40Q9H9A6 602 aa12.74□□□□□ -0.37
TMEM39B-208ENST00000487305 MTMR10Q9NXD2 777 aa12.74□□□□□ -0.37
TMEM39B-208ENST00000487305 PRPF19Q9UMS4 504 aaKnown RBP12.74□□□□□ -0.37
TMEM39B-208ENST00000487305 ARHGAP26Q9UNA1 814 aa12.74□□□□□ -0.37
TMEM39B-208ENST00000487305 PCDHB12Q9Y5F1 795 aa12.74□□□□□ -0.37
TMEM39B-208ENST00000487305 SLC4A7Q9Y6M7 1214 aa12.74□□□□□ -0.37
TMEM39B-208ENST00000487305 BRCA1P38398 1863 aaKnown RBP12.74□□□□□ -0.37
TMEM39B-208ENST00000487305 RALGAPA2Q2PPJ7 1873 aa12.74□□□□□ -0.37
TMEM39B-208ENST00000487305 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms