RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 SIK2Q9H0K1 926 aa18.2■□□□□ 0.5
CHMP3-207ENST00000485465 DHX35Q9H5Z1 703 aaKnown RBP18.2■□□□□ 0.5
CHMP3-207ENST00000485465 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.2■□□□□ 0.5
CHMP3-207ENST00000485465 DDX56Q9NY93 547 aaKnown RBP18.2■□□□□ 0.5
CHMP3-207ENST00000485465 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.2■□□□□ 0.5
CHMP3-207ENST00000485465 JRKLQ9Y4A0 524 aa18.2■□□□□ 0.5
CHMP3-207ENST00000485465 SNX10Q9Y5X0 201 aa18.2■□□□□ 0.5
CHMP3-207ENST00000485465 BRWD1Q9NSI6 2320 aa18.2■□□□□ 0.5
CHMP3-207ENST00000485465 EYSQ5T1H1 3165 aa18.2■□□□□ 0.5
CHMP3-207ENST00000485465 GOLGA6L7A0A1B0GV03 622 aa18.19■□□□□ 0.5
CHMP3-207ENST00000485465 XIRP2A4UGR9 3374 aa18.19■□□□□ 0.5
CHMP3-207ENST00000485465 ANHXE9PGG2 379 aa18.19■□□□□ 0.5
CHMP3-207ENST00000485465 DDX3YO15523 660 aaKnown RBP18.19■□□□□ 0.5
CHMP3-207ENST00000485465 ECI2O75521 394 aa18.19■□□□□ 0.5
CHMP3-207ENST00000485465 IL9P15248 144 aa18.19■□□□□ 0.5
CHMP3-207ENST00000485465 L1CAMP32004 1257 aa18.19■□□□□ 0.5
CHMP3-207ENST00000485465 PEX5P50542 639 aa18.19■□□□□ 0.5
CHMP3-207ENST00000485465 RPS6KA1Q15418 735 aa18.19■□□□□ 0.5
CHMP3-207ENST00000485465 ZFYVE27Q5T4F4 411 aa18.19■□□□□ 0.5
CHMP3-207ENST00000485465 ADGRF1Q5T601 910 aa18.19■□□□□ 0.5
CHMP3-207ENST00000485465 BBS7Q8IWZ6 715 aa18.19■□□□□ 0.5
CHMP3-207ENST00000485465 KATNAL2Q8IYT4 538 aa18.19■□□□□ 0.5
CHMP3-207ENST00000485465 PYROXD2Q8N2H3 581 aa18.19■□□□□ 0.5
CHMP3-207ENST00000485465 PLCD3Q8N3E9 789 aa18.19■□□□□ 0.5
CHMP3-207ENST00000485465 UBL4BQ8N7F7 174 aa18.19■□□□□ 0.5
CHMP3-207ENST00000485465 FGF14Q92915 247 aa18.19■□□□□ 0.5
CHMP3-207ENST00000485465 RPGRIP1Q96KN7 1286 aa18.19■□□□□ 0.5
CHMP3-207ENST00000485465 WDR24Q96S15 920 aa18.19■□□□□ 0.5
CHMP3-207ENST00000485465 PRMT1Q99873 361 aaKnown RBP18.19■□□□□ 0.5
CHMP3-207ENST00000485465 DDX50Q9BQ39 737 aaKnown RBP18.19■□□□□ 0.5
CHMP3-207ENST00000485465 KXD1Q9BQD3 176 aa18.19■□□□□ 0.5
CHMP3-207ENST00000485465 TLR10Q9BXR5 811 aa18.19■□□□□ 0.5
CHMP3-207ENST00000485465 PLA2G2FQ9BZM2 168 aa18.19■□□□□ 0.5
CHMP3-207ENST00000485465 SPTBN5Q9NRC6 3674 aaKnown RBP18.19■□□□□ 0.5
CHMP3-207ENST00000485465 TBC1D14Q9P2M4 693 aa18.19■□□□□ 0.5
CHMP3-207ENST00000485465 THEGQ9P2T0 379 aa18.19■□□□□ 0.5
CHMP3-207ENST00000485465 OR12D3Q9UGF7 316 aa18.19■□□□□ 0.5
CHMP3-207ENST00000485465 TACR2P21452 398 aa18.18■□□□□ 0.5
CHMP3-207ENST00000485465 ARSEP51690 589 aa18.18■□□□□ 0.5
CHMP3-207ENST00000485465 ETF1P62495 437 aaKnown RBP18.18■□□□□ 0.5
CHMP3-207ENST00000485465 NRG1Q02297 640 aaPredicted RBP18.18■□□□□ 0.5
CHMP3-207ENST00000485465 HTR4Q13639 388 aa18.18■□□□□ 0.5
CHMP3-207ENST00000485465 DPYSL2Q16555 572 aa18.18■□□□□ 0.5
CHMP3-207ENST00000485465 AAK1Q2M2I8 961 aa18.18■□□□□ 0.5
CHMP3-207ENST00000485465 FAM133BQ5BKY9 247 aaKnown RBP18.18■□□□□ 0.5
CHMP3-207ENST00000485465 RAP1GAP2Q684P5 730 aa18.18■□□□□ 0.5
CHMP3-207ENST00000485465 VITQ6UXI7 678 aa18.18■□□□□ 0.5
CHMP3-207ENST00000485465 C14orf80Q86SX3 495 aa18.18■□□□□ 0.5
CHMP3-207ENST00000485465 CHSY1Q86X52 802 aa18.18■□□□□ 0.5
CHMP3-207ENST00000485465 MFSD6LQ8IWD5 586 aa18.18■□□□□ 0.5
CHMP3-207ENST00000485465 FAM217AQ8IXS0 508 aa18.18■□□□□ 0.5
CHMP3-207ENST00000485465 ZDHHC14Q8IZN3 488 aa18.18■□□□□ 0.5
CHMP3-207ENST00000485465 KCTD6Q8NC69 237 aa18.18■□□□□ 0.5
CHMP3-207ENST00000485465 FAM71BQ8TC56 605 aa18.18■□□□□ 0.5
CHMP3-207ENST00000485465 RAPGEF5Q92565 580 aa18.18■□□□□ 0.5
CHMP3-207ENST00000485465 ALG3Q92685 438 aa18.18■□□□□ 0.5
CHMP3-207ENST00000485465 KCTD15Q96SI1 283 aaPredicted RBP18.18■□□□□ 0.5
CHMP3-207ENST00000485465 KLHL11Q9NVR0 708 aa18.18■□□□□ 0.5
CHMP3-207ENST00000485465 THG1LQ9NWX6 298 aaKnown RBP18.18■□□□□ 0.5
CHMP3-207ENST00000485465 FAM72CH0Y354 149 aa18.17■□□□□ 0.5
CHMP3-207ENST00000485465 ENC1O14682 589 aa18.17■□□□□ 0.5
CHMP3-207ENST00000485465 SLC9A3R1O14745 358 aaPredicted RBP18.17■□□□□ 0.5
CHMP3-207ENST00000485465 KRT1P04264 644 aa18.17■□□□□ 0.5
CHMP3-207ENST00000485465 KDELR1P24390 212 aa18.17■□□□□ 0.5
CHMP3-207ENST00000485465 SLC6A4P31645 630 aa18.17■□□□□ 0.5
CHMP3-207ENST00000485465 GGCXP38435 758 aa18.17■□□□□ 0.5
CHMP3-207ENST00000485465 DNA2P51530 1060 aa18.17■□□□□ 0.5
CHMP3-207ENST00000485465 CDH6P55285 790 aa18.17■□□□□ 0.5
CHMP3-207ENST00000485465 RWDD2BP57060 319 aa18.17■□□□□ 0.5
CHMP3-207ENST00000485465 SEMA3BQ13214 749 aa18.17■□□□□ 0.5
CHMP3-207ENST00000485465 AUHQ13825 339 aaKnown RBP18.17■□□□□ 0.5
CHMP3-207ENST00000485465 KRT81Q14533 505 aa18.17■□□□□ 0.5
CHMP3-207ENST00000485465 PDK2Q15119 407 aa18.17■□□□□ 0.5
CHMP3-207ENST00000485465 FAM72AQ5TYM5 149 aa18.17■□□□□ 0.5
CHMP3-207ENST00000485465 FAM72DQ6L9T8 149 aa18.17■□□□□ 0.5
CHMP3-207ENST00000485465 FAM72BQ86X60 149 aa18.17■□□□□ 0.5
CHMP3-207ENST00000485465 ZNF683Q8IZ20 524 aa18.17■□□□□ 0.5
CHMP3-207ENST00000485465 RCOR2Q8IZ40 523 aa18.17■□□□□ 0.5
CHMP3-207ENST00000485465 CPXM2Q8N436 756 aa18.17■□□□□ 0.5
CHMP3-207ENST00000485465 OSCP1Q8WVF1 389 aa18.17■□□□□ 0.5
CHMP3-207ENST00000485465 OTUB2Q96DC9 234 aa18.17■□□□□ 0.5
CHMP3-207ENST00000485465 C16orf45Q96MC5 204 aaPredicted RBP18.17■□□□□ 0.5
CHMP3-207ENST00000485465 RPP25Q9BUL9 199 aaKnown RBP18.17■□□□□ 0.5
CHMP3-207ENST00000485465 LINC00597Q9H2U6 94 aa18.17■□□□□ 0.5
CHMP3-207ENST00000485465 PCDH18Q9HCL0 1135 aa18.17■□□□□ 0.5
CHMP3-207ENST00000485465 DUS2Q9NX74 493 aaKnown RBP18.17■□□□□ 0.5
CHMP3-207ENST00000485465 WNT6Q9Y6F9 365 aa18.17■□□□□ 0.5
CHMP3-207ENST00000485465 NUMBLQ9Y6R0 609 aa18.17■□□□□ 0.5
CHMP3-207ENST00000485465 DOCK8Q8NF50 2099 aa18.17■□□□□ 0.5
CHMP3-207ENST00000485465 LRRD1A4D1F6 860 aa18.16■□□□□ 0.5
CHMP3-207ENST00000485465 E9PAM4 449 aa18.16■□□□□ 0.5
CHMP3-207ENST00000485465 F5H5T6 163 aa18.16■□□□□ 0.5
CHMP3-207ENST00000485465 PI4K2BG5E9Z4 385 aa18.16■□□□□ 0.5
CHMP3-207ENST00000485465 GFRA2O00451 464 aa18.16■□□□□ 0.5
CHMP3-207ENST00000485465 ZRANB2O95218 330 aaKnown RBP eCLIP18.16■□□□□ 0.5
CHMP3-207ENST00000485465 ATP1A1P05023 1023 aaKnown RBP18.16■□□□□ 0.5
CHMP3-207ENST00000485465 CD48P09326 243 aa18.16■□□□□ 0.5
CHMP3-207ENST00000485465 PSMC3P17980 439 aa18.16■□□□□ 0.5
CHMP3-207ENST00000485465 CHKAP35790 457 aa18.16■□□□□ 0.5
CHMP3-207ENST00000485465 ZNF135P52742 658 aaPredicted RBP18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms